G37215


Basic Information

Item Value
gene id G37215
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17112502 ~ 17116008 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50158
TAGAGTtctgtattaaaaacaaaagaagcatTTATTCAATTAGCAATTGGAAATGTGTACATGTTTTGTGAAATTTTGTTCATGCAGCTCAGAAAATCCTTTTTTGTTCCACATGCacaatgtattaaatttatttgataACCAGAAAGAGCACTCAAGTGTCACAGAGGGTTTATTTGGCCAAACATGCCAAAGGAGAGATGAAGAACCTAGAGGCAGATTTGTTAAGTGTCTGTGTGCATGTTAAAgatgtaaatgcattatttttggaagaaaataaAGCGCGACACTGCATTGATTAGCTGCCTCAAACACAATTTTCCATCAACTGCTGAGGAAAAGGTGCTACTGGCCAAAAATGGTCCATGAATCCCATTTAGCTGTACATTACCATTGTTTGGCCTGAAAAAAGGCTTATGAAAACTGCAAGAATCTGATTagcctgcagctgcagcaccatgTCGAAAGAAAGTCAGACTGGGAGTTTTAAGGCGCTTTATCTGTGAAAACACTCCTCAACCTTCAACTGTATAGTTCTCCTTGCATGTTTTAAGATTAAATGTTACGAATCTCTCAAAATGAACAGTTTGTAATTAATTCCCTGTTATGTTTTGTGTGCCAACTGGTATATATCCTTTAAAAAAGCAAGAACTTATTATGGTTTAGagcattattgttattttatgcaACAATCAGTTCCAACCACACAATCTGACTCGTGGTAAATCATTTTATCTATGATCTCATATCTGATAAGAGCAGTTTTTGTTACCATTCTTGCATTATTACACAGATCAACCGCTAATAATTCACAACAACAGTTCCTTTACTGTAAGCAGCTGGAACTACTTTTCAAATTTTCAATATCAAAAACACAGTTAAGTTacacaaaagcaaaagcacGCTCAAAGCTTTGTGTTCACAGGTGATTGGGGTCGAGATGATCTTAAATAGGCTAGCACCTGTGACTAAACCACAACCATAATATAATTCATAAAAACTGCTTCCTCTTATGGGTCATACATTATATTTAGGTTCTGTCCACATGTATTCGGATACTTATGTTAAAACATTCTCTCTCagtttcaggaaaatattgtcCACATCCACAACAGAAAATGACCCAAGCTAAAATGCTAACGTTAGCATAACAGGGGACATAAAATTCTTATGTGTAATAGTAAAACAGAGCTAGTTAACTAGCCGGGGATAAGGAACATTTTCTGCAACAACAAAGTTCCTGttataataatgtgttatttaataagcagtatctctctcacacacattcatatcATTTTTAAGAGCAGAAGGACCCCAAAACACCAAGctagcaatgttttaaaacaccCGGTTACGTGTGGTGTTAGTTAATGGAGTAATTGTGCTAAATTTCAACATCTGCATTGCAATAATGCAAGTTGCAGATCATTTAACCTTAAAAATGATCTTGTATGTTACTCCTGTGCCTTATATACATCAAAAGCATATCATAGCTGCAATTTATACAAGTTTTTCAAAACAGAACTCAAGCGAATAAAGAGAACGCTGCCAATTACATGTCAACCCCTAGCTGTGCCCTGCTTTGGTATTTGTGTAGCCTTTTGTCCTTCCCTTGATGATTTACTGATTCATGATTTGACAACACAGTATAATCAGATAATGTAACTCAGAACGTGTTTCACAAGGCAGTTTCAGCAAGCAAGATAAAGAATGCCAATCAAGATAAAGAATGACTAAGAGTACTGACTGTCCAACTGGGCTAGTCATCACTTCCTTTTCTATTGGAGAGTCTTGTTACTGGCTTATGTAATATCTGATAATGTCCATTATCATGCTAGACTGACTAGATCTGACATACTGACTAGATGACTGTAAACAGCTGGAGCACCAGCTATCCAGACTTCAGCTTTACAcacacccagacacacacacacctcagttcTTTCCTTACATTTAAACAGACTGAATGCAAGCTTAATGCAACCAACACAGTTGGTCAGATGAAGCATTTTTCAAGGTCCATCAACATACCTGTTAAATACAGCGGAACAATCTTAATTTAAAGCAAATTTTACCCCCCTTTTACTGTTTTGGTTTAAAGGTTCTGAGTCACGGTTTAAAGCATGGTTAgctcaaaacacataaaaaatatttttttatttaatacaacaaatttatttttcaaaatgtttaaaaagttgaATAAAGTTGTTTATTTTGATATGTGGATTTGTAGTTTGTACAATAGGGGCAGTTTTTACATTCTTAGTATAAACTGGGTGCTGTCAAATGAGAGGAGAATTTCAGGAAACCTTTTCCACCTTTAACTAATTTGTTTTCTGTGATCACTTGACCACATTTTGATCAGACTGTGATCAAAACATACATTTGGAGGTGGAGACACATCTAAAAAGCATTTAAGCCAAATGCAAACAGAATGTGTTTCCCAAATACAGTTGGGCAAGCTAAAATGCATTAACTGAAAAAGTTAACACAAGTGCTTTTTACCATAATAGATACTGGTTTCTCTTTGTGTAATCTCAATAATGCGCATGTGCCAGTAGATGGTCAATCACTAAATCTAAAATTTAAAACTTTGGAGAAAGTGAAATTGAATGCCACCAGCCCACACCGGGGATGCATTTTTGTGGAAAGTGTAAACAAGACAGAATCTGGCCAAAGTATGTCCAAATACTAACTAGATAAGAAACTCatgttaatgccaggtgtaaacagccTTGCCATATATAAAGTGCTGCACCCATATGAGGAAAACACCGCAGTGTTCCACCTCATTTAGCACACCTAATTTAACCCATGTAAACAGCAAGGCATTTGGGATGTGACTACAGGTGGAAAGTGCTGATCTTTGCAGCTGTGTGCTAAAAGGAGCCCAATTTGACACCAATTTAGCGTTCAATTTGCATGCATGAGAAGTAGGGGCTTGTCCAAGTGCCCTTAgcaagaaagacagacaaacaaacaaacaaataaaagtacAATCATATCATGCACACCATGCGCCAAACCGTGACCTGAAGAACCACAAAACCGTTACAGCTCTACCGGCTACTTTCTGGACCATGACAAGAAAAAGCAACAAGCGGAATGATGCTATTGCTGATGCTGCTACTGAAGTGTTTTGCATGTGGGTCTTATTCTTCTTAGATTCATTTCCTTCCTGTTTTGCTGGCAGTGGTGTGAAATTTAACTAGCTCATAATGCAGACCTTTCAAACATTCACAGAAGCATCTGTGTGTATCTGCTTTAAAAGAACATCACAGCATTCTGAAAGTATTATGTTGTAAAGGACCATGTAAACATATCCCagagttaaatattaaaagtgaTAACAGTCTTGGGAAAACAAATCAGCTCCTTTACTCCTCCATAGCTGACCAAGCCTCCTCAGCCTTCATATAGTACTGATTAGCCAGTCTGCCTTTCATTGCCTCCATGGCTGCTTCAGCTGCCTCAGTGAACA

Function

NR:

description
PREDICTED: ubiquitin-conjugating enzyme E2 R2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50158 True 3487 lncRNA 0.37 2 17112502 17116008

Neighbor

gene id symbol gene type direction distance location
trnal-uag_1 NA coding downstream 17176 17095245 ~ 17095326 (-)
LOC103032763 snu13,nh2l1,snu13b,LOC105898651,LOC105031476,LOC105910236 coding downstream 44520 17065403 ~ 17067982 (-)
LOC103037732 NA coding downstream 218985 16875022 ~ 16893517 (-)
exoc6 exoc6,LOC107654070 coding downstream 246408 16798517 ~ 16866094 (-)
LOC103044660 LOC103044660,LOC108412396,LOC107653962,LOC108273895,LOC107745679,LOC107593523,LOC107596578 coding downstream 318995 16790627 ~ 16793507 (-)
LOC103043322 NA coding upstream 32533 17148541 ~ 17169878 (-)
LOC103029821 aco2,LOC108273913,LOC107692062,LOC107554054,LOC107731401 coding upstream 71659 17187667 ~ 17198837 (-)
LOC103028774 NA coding upstream 88324 17204332 ~ 17212783 (-)
LOC103028243 LOC108431941,LOC107584177 coding upstream 97588 17213596 ~ 17232139 (-)
LOC103027309 NA coding upstream 157365 17273373 ~ 17288832 (-)
G37213 NA non-coding downstream 1793 17108712 ~ 17110709 (-)
G37206 NA non-coding downstream 20451 17091742 ~ 17092051 (-)
G37191 sun1 non-coding downstream 71561 17036556 ~ 17040941 (-)
G37186 NA non-coding downstream 85560 17026457 ~ 17026942 (-)
G37189 NA non-coding downstream 91574 17020721 ~ 17020928 (-)
G37217 NA non-coding upstream 5767 17121775 ~ 17122201 (-)
G37237 tnrc6b non-coding upstream 125168 17241176 ~ 17327596 (-)
G37238 pdap1a,LOC103027934,LOC106609414,LOC106589537,LOC105025093,LOC107554049,LOC108431950 non-coding upstream 125712 17241720 ~ 17247453 (-)
G37254 tnrc6b,LOC107690060 non-coding upstream 219583 17335591 ~ 17337322 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding upstream 269833 17385841 ~ 17390421 (-)
crym rac1,RAC1,rac1a,crym,LOC105898786,LOC108412270,LOC108437155,LOC107569188 other downstream 49555 17047607 ~ 17062947 (-)
G37183 NA other downstream 93584 17016128 ~ 17018918 (-)
LOC103043629 LOC108412394 other downstream 197217 16913570 ~ 16915285 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other downstream 1271986 15837105 ~ 15840516 (-)
G36677 NA other downstream 1337909 15747400 ~ 15774593 (-)
LOC103030148 csdc2,LOC105919973,LOC102235694 other upstream 63339 17179347 ~ 17184427 (-)
LOC103024241 maff,LOC107690056,LOC107692071,LOC107554043,LOC107584105,LOC107734233 other upstream 258176 17374184 ~ 17381733 (-)
G37290 NA other upstream 316964 17432972 ~ 17466024 (-)
LOC103025140 NA other upstream 357902 17473910 ~ 17476878 (-)
LOC103025753 LOC108425979,LOC108274047 other upstream 418695 17534703 ~ 17689384 (-)

Expression


Co-expression Network