G37333 (LOC103045739)


Basic Information

Item Value
gene id G37333
gene name LOC103045739
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17705734 ~ 17708605 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50339
CGTGCTCCAAATTGTATTTGTacaataaacttaaaaataacatttatttctcCATTATTCCTTCAACCAACAGATACAGAGAATCACTCACACGTACACACGatttattacattacaataaagGCTCGACATAACCCTACAGTCTGAGATAAATCAGGTTCCCTCCTGATGCACAGCCTGTTCGTTTTTCTGTGATTTACTGATGTTTATTCTGGTATAATGCTGCCCTCTAGTGTTTCTCAGGCTCTGTATTATTTTTCCACACGTTTTAAGCGAGACATTGTCCAGGTCAGAGATTCCGGAGCTGGCTGAAGAGAGATCTCCTCCGGCAGGGTTTAATCACCAAGGACCAGCTCTCCTAACAAAGTGTCCTCAGAAACCTTCAGCTGACCTTCAGTTGGCTCCGGTCTTGGGCGCTCGATACCTGGCCGCCTCCTTGGCCTCTCTGTCGATCTCGTCCATGATCACCTCTTGAGACACAGAGTAAAAGGTGTAGCCGTATATACCCATCACCGCCGCTCCGATAGCCAGCCCGGTCAGAAGGTTCCGGCCGCGGAGCTTCTGGCTCCTCTTCCTCCACTGCTCCATTTCCACCTGCCGGATGAACTGCATCTGCTCGCGGGTCAGGCTCTCCTTGGTGGGGTCTATTCTCTTAGCGAACTCTTCCCCGCTCGCCGCCGCTTTCCCCTGCCTGTCCGCCATGCTGCCAGTGCGT

Function

NR:

description
cytochrome c oxidase assembly factor 3 homolog, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50339 True 715 lncRNA 0.50 2 17705734 17708605

Neighbor

gene id symbol gene type direction distance location
lsm12 lsm12,LOC107708984,LOC107693683,LOC107562026 coding downstream 188024 17509960 ~ 17517710 (-)
LOC103024821 LOC108425935 coding downstream 200917 17500469 ~ 17504817 (-)
LOC111192380 NA coding downstream 239063 17442641 ~ 17466671 (-)
LOC111192420 NA coding downstream 267242 17431006 ~ 17438492 (-)
rsl1d1 NA coding downstream 283939 17415075 ~ 17421795 (-)
wnk4 NA coding upstream 2395 17711000 ~ 17784278 (-)
LOC103047174 fam57b,fam57bb,LOC108274141,LOC106583943,LOC107578766,LOC106579402 coding upstream 95129 17803734 ~ 17820280 (-)
maz maz coding upstream 114153 17822758 ~ 17836906 (-)
taok2 taok2b,LOC107693686,LOC108273910,LOC107562015,LOC107708977,LOC107571768 coding upstream 130822 17839427 ~ 17872154 (-)
LOC103022355 NA coding upstream 195599 17904204 ~ 17918797 (-)
G37309 NA non-coding downstream 149812 17553572 ~ 17555922 (-)
G37298 tmem101,LOC107720276 non-coding downstream 211319 17488885 ~ 17494415 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding downstream 315313 17385841 ~ 17390421 (-)
G37254 tnrc6b,LOC107690060 non-coding downstream 368412 17335591 ~ 17337322 (-)
G37237 tnrc6b non-coding downstream 378138 17241176 ~ 17327596 (-)
G37443 NA non-coding upstream 417929 18126534 ~ 18126807 (-)
G37444 NA non-coding upstream 418649 18127254 ~ 18127560 (-)
G37449 NA non-coding upstream 429344 18137949 ~ 18139122 (-)
G37450 NA non-coding upstream 432187 18140792 ~ 18141076 (-)
G37451 NA non-coding upstream 433402 18142007 ~ 18142377 (-)
cntd1 NA other downstream 711 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 16350 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 228856 17473910 ~ 17476878 (-)
G37290 NA other downstream 239710 17432972 ~ 17466024 (-)
LOC103024241 maff,LOC107690056,LOC107692071,LOC107554043,LOC107584105,LOC107734233 other downstream 324001 17374184 ~ 17381733 (-)
vps25 vps25 other upstream 81346 17789951 ~ 17795988 (-)
LOC103047479 LOC108441156 other upstream 573885 18282490 ~ 18317957 (-)
G37603 NA other upstream 864086 18572691 ~ 18573176 (-)
G37616 NA other upstream 924973 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1835620 19544225 ~ 19601284 (-)

Expression


Co-expression Network