G37444



Basic Information


Item Value
gene id G37444
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18127254 ~ 18127560 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU50503
CTGTTATGCTCCTCCCCTTTTATCTAGGGGTGAGGAGGAGTAACATTAATGCATGTGATGAGGAGGAAGTGGGAGGACAACAATTGGCggtaaaacaaaatgaaatttattacaaaagtcaaagtataaaacacaaatatacaatGGATCAGAAAATAAGTGAATAAACTGaatataaagagaataaagCAATTAAGTATGTTGATAACAAAACTAGAAAGTGTATCGTagagaaaataaatcaacagaAACTGTAATATCTAAAGGTGGACTAAAGGACGGTGCTAacgaaaagaaaataataaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU50503 True 307 lncRNA 0.32 1 18127254 18127560

Neighbor


gene id symbol gene type direction distance location
LOC103029702 LOC108441164,LOC108413442 coding downstream 872 18123021 ~ 18126382 (-)
LOC103046869 NA coding downstream 9401 18100566 ~ 18117853 (-)
aldoa aldoa,aldoab,LOC101465268,LOC107720037 coding downstream 70525 18043042 ~ 18056729 (-)
LOC103046263 NA coding downstream 112160 17992067 ~ 18015094 (-)
LOC103023915 NA coding downstream 140765 17972588 ~ 17986489 (-)
LOC111192381 NA coding upstream 15257 18142817 ~ 18160060 (-)
LOC111192382 NA coding upstream 93311 18220871 ~ 18232563 (-)
LOC111192383 NA coding upstream 107578 18235138 ~ 18241122 (-)
LOC103031189 NA coding upstream 115359 18242919 ~ 18253834 (-)
LOC103031500 LOC108441168 coding upstream 142822 18270382 ~ 18278701 (-)
G37443 NA non-coding downstream 447 18126534 ~ 18126807 (-)
G37333 LOC103045739 non-coding downstream 418649 17705734 ~ 17708605 (-)
G37309 NA non-coding downstream 571332 17553572 ~ 17555922 (-)
G37298 tmem101,LOC107720276 non-coding downstream 632839 17488885 ~ 17494415 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding downstream 736833 17385841 ~ 17390421 (-)
G37449 NA non-coding upstream 10389 18137949 ~ 18139122 (-)
G37450 NA non-coding upstream 13232 18140792 ~ 18141076 (-)
G37451 NA non-coding upstream 14447 18142007 ~ 18142377 (-)
G37455 NA non-coding upstream 43582 18171142 ~ 18171354 (-)
G37456 NA non-coding upstream 58034 18185594 ~ 18186290 (-)
vps25 vps25 other downstream 331266 17789951 ~ 17795988 (-)
cntd1 NA other downstream 422231 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 437870 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 650376 17473910 ~ 17476878 (-)
G37290 NA other downstream 661230 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 154930 18282490 ~ 18317957 (-)
G37603 NA other upstream 445131 18572691 ~ 18573176 (-)
G37616 NA other upstream 506018 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1416665 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1690708 19818268 ~ 19825652 (-)

Expression



Co-expression Network