G37456


Basic Information

Item Value
gene id G37456
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18185594 ~ 18186290 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50515
CAGCCATAAAAAGCACCCAATCTTGGGAGCATGTACGCACGCATGTATGTCTTCTCGATAAAAGCTAAAACGATAATCCGCTTTAGCTTTACTTACCCCGCCATGAAGCaaattttcttgtttatttcctatTAAGAAGactgaaatctgcaccccccgccatgaaaagcaccccatCTCAGGAGCATCTTTGCatcgtcttcttgataaaagctaagataatctgctttaactttacttagagagagggtgcttgagagggggtgcttttcctggtgggggtgctgaaaTTGGCACAACACtgtaatgaaaacaagctgaaatgaaataggtaatagtaacgaggctatttttttaaatataaggaGTAGAAAGGTCAATACCTGACACCTCTGCCAGTTCCTGCACTGTGGCATCATGAATAAGACTTAATTACATTGGATTTGAAGAAATTCTGGCCTGTTGTCATGTTGCCCAGCCCTGACCGCTCTCAACACCTAATTCAGGAGGTTttacagcactgctgcagtctGTACGAGTCTAAAACCCTGTTTGTTCTTCGCTTTGTTTATTGTGTCTCTAAATAGCACACGCTGAGCTTTTGTCCACAGCTTCTCTCACTTCCTTCCTGTCCTCCATCACTTGCTTTATCTTCACTGCAGTCGAGCCCAGTACTGCCCCAGGTTCTGCCCCATGC

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50515 True 697 lncRNA 0.44 1 18185594 18186290

Neighbor

gene id symbol gene type direction distance location
LOC111192381 NA coding downstream 25534 18142817 ~ 18160060 (-)
LOC103029702 LOC108441164,LOC108413442 coding downstream 59212 18123021 ~ 18126382 (-)
LOC103046869 NA coding downstream 67741 18100566 ~ 18117853 (-)
aldoa aldoa,aldoab,LOC101465268,LOC107720037 coding downstream 128865 18043042 ~ 18056729 (-)
LOC103046263 NA coding downstream 170500 17992067 ~ 18015094 (-)
LOC111192382 NA coding upstream 34581 18220871 ~ 18232563 (-)
LOC111192383 NA coding upstream 48848 18235138 ~ 18241122 (-)
LOC103031189 NA coding upstream 56629 18242919 ~ 18253834 (-)
LOC103031500 LOC108441168 coding upstream 84092 18270382 ~ 18278701 (-)
LOC103032028 NA coding upstream 162207 18348497 ~ 18358860 (-)
G37455 NA non-coding downstream 14240 18171142 ~ 18171354 (-)
G37451 NA non-coding downstream 43217 18142007 ~ 18142377 (-)
G37450 NA non-coding downstream 44518 18140792 ~ 18141076 (-)
G37449 NA non-coding downstream 46472 18137949 ~ 18139122 (-)
G37444 NA non-coding downstream 58034 18127254 ~ 18127560 (-)
G37457 NA non-coding upstream 78 18186368 ~ 18186911 (-)
G37458 NA non-coding upstream 759 18187049 ~ 18188008 (-)
G37459 NA non-coding upstream 2183 18188473 ~ 18189444 (-)
G37565 NA non-coding upstream 224231 18410521 ~ 18449197 (-)
LOC103033820 NA non-coding upstream 225057 18411347 ~ 18418294 (-)
vps25 vps25 other downstream 389606 17789951 ~ 17795988 (-)
cntd1 NA other downstream 480571 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 496210 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 708716 17473910 ~ 17476878 (-)
G37290 NA other downstream 719570 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 96200 18282490 ~ 18317957 (-)
G37603 NA other upstream 386401 18572691 ~ 18573176 (-)
G37616 NA other upstream 447288 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1357935 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1631978 19818268 ~ 19825652 (-)

Expression


Co-expression Network