G37565


Basic Information

Item Value
gene id G37565
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18410521 ~ 18449197 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50653
GGGTTTGACTTGTTTTAATGGTACTATTTACAAGCCTTTTTTTCCTGCAAATGATTTAACTTCTCGAACAATTAAAACGTACAATGAAACCTGTCTTGAGTAACTACAAAAACAAAGACCatggaggaaaaaaaggaacaaagaaaaataaaacagaaaacaaaaactgtgattgaaggaaaaaaaacaaagacaaacagGGACAAGATTATGAGATGATCATAAACCATAATAAATGTTGAGTTGCATAGCCAGTAGTTACTCCGGGCGACAGTGCTGAAGAGGAAATGAAACTGAGATCAGATCTGCTGCATTTAAACACAAATGGCGAAcaagaataaacagaagctTCACTGGAGAGAAACGGACGCCTGTAGAACTGCAGAACCTGAGAGTAAGGAGGGTCGGGGAAGTTGGAGATGTTAGGCATGAAAGATTACTTTCTTTAGTTACAAAATGACTGGGAGAGGAAGAAGGTAAGAAGGGATGAAGATATGACGGCGATGTGGAGGAACTTGTGGAGGAACTTGAACTGAGCTCAGCTTCCATAATGTTCATTATGAGCCCCAGCTGTGAATTCTCTACATGATGTAGAATCAGACTGCGATTTCTGCCGATGTGGATTAACTCCGTATCTGAGGGGTGACTGGAGAAAAACAGGGCTGCTGAAAGAGTGCAGAGGAGATGGACAGACTGTGTACAGACAGATACGAACATCGTATGAAGTGCTTCTAGTCGTGGATGCTCTGATGATTCGATGTGTGTCTATTAGTTGAGATTAATGAGGAGGGAAAACCTACTTCGTCTGGATTTGGTCGTTGTCACTCCACAGTACAAGCATACACAAACTAGTCAGCAAGGAAACACCCTTTTGGTCAAGTCCCCTTCCTGAAGTCTGCTACATAGTGCGCTACGAAGTGATCACCTGACAGGTTAGAATACCACACCAAGAACATAGTTTAGCTGACTATAAGAATAATTatgcttttgatttttttttttttttgtgtttttttttttttttttt

Function

NR:

description
PREDICTED: nuclear receptor subfamily 2 group F member 1-A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50653 True 1027 lncRNA 0.40 2 18410521 18449197

Neighbor

gene id symbol gene type direction distance location
LOC103033508 si:ch211-255p10.4,brsk1,LOC108441159,LOC107598587,LOC108247084,LOC103033508,LOC107557374,LOC108274928,LOC107654020,LOC107658484 coding downstream 603 18388678 ~ 18409918 (-)
LOC103033182 LOC108441158,LOC108273897,LOC107664611,LOC107708947 coding downstream 26116 18360572 ~ 18384405 (-)
LOC103032028 NA coding downstream 51661 18348497 ~ 18358860 (-)
LOC103031500 LOC108441168 coding downstream 131820 18270382 ~ 18278701 (-)
LOC103031189 NA coding downstream 156687 18242919 ~ 18253834 (-)
LOC103047794 mapt,LOC108274153,LOC108441162 coding upstream 3749 18452946 ~ 18498356 (-)
LOC111192385 NA coding upstream 25790 18474987 ~ 18477121 (-)
LOC103034677 NA coding upstream 54443 18503640 ~ 18512085 (-)
LOC107197613 LOC108429207,LOC108429768 coding upstream 613660 19062857 ~ 19124736 (-)
LOC103043551 LOC108444285,LOC108273949 coding upstream 830789 19279986 ~ 19291010 (-)
G37459 NA non-coding downstream 221077 18188473 ~ 18189444 (-)
G37458 NA non-coding downstream 222513 18187049 ~ 18188008 (-)
G37457 NA non-coding downstream 223610 18186368 ~ 18186911 (-)
G37456 NA non-coding downstream 224231 18185594 ~ 18186290 (-)
G37455 NA non-coding downstream 239167 18171142 ~ 18171354 (-)
LOC103035005 NA non-coding upstream 83419 18532616 ~ 18534771 (-)
G37596 LOC108435052 non-coding upstream 98428 18547625 ~ 18547908 (-)
G37597 scn4a non-coding upstream 98886 18548083 ~ 18550231 (-)
G37598 scn4a,LOC108435052 non-coding upstream 105152 18554349 ~ 18554604 (-)
G37600 scn4aa,scn4a,LOC107598592,LOC107732174 non-coding upstream 113914 18563111 ~ 18563493 (-)
LOC103047479 LOC108441156 other downstream 92564 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 614533 17789951 ~ 17795988 (-)
cntd1 NA other downstream 705498 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 721137 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 933643 17473910 ~ 17476878 (-)
G37603 NA other upstream 123494 18572691 ~ 18573176 (-)
G37616 NA other upstream 184381 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1095028 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1369071 19818268 ~ 19825652 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 2062474 20511671 ~ 20679431 (-)

Expression


Co-expression Network