G37645


Basic Information

Item Value
gene id G37645
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18709453 ~ 18774343 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50778
aagggagcagagtctggaggaagagtggagaaacacacagtccaaactgctcgaggtctagtgtgaagtttccaccaatcagtgatggtttaacggagagacatgtctgtcatctgctggtgttgatccactgtgttttattatcgagTCTAAAGTACAGGAACCTCACAGAACATTAGgttataacctagctaaccatAACAGTTAATTACTGAGGCGCTAGCTggctaattagcttagcttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50778 True 245 lncRNA 0.44 2 18709453 18774343

Neighbor

gene id symbol gene type direction distance location
LOC103034677 NA coding downstream 197368 18503640 ~ 18512085 (-)
LOC103047794 mapt,LOC108274153,LOC108441162 coding downstream 211097 18452946 ~ 18498356 (-)
LOC111192385 NA coding downstream 232332 18474987 ~ 18477121 (-)
LOC103033508 si:ch211-255p10.4,brsk1,LOC108441159,LOC107598587,LOC108247084,LOC103033508,LOC107557374,LOC108274928,LOC107654020,LOC107658484 coding downstream 299535 18388678 ~ 18409918 (-)
LOC103033182 LOC108441158,LOC108273897,LOC107664611,LOC107708947 coding downstream 325048 18360572 ~ 18384405 (-)
LOC107197613 LOC108429207,LOC108429768 coding upstream 288514 19062857 ~ 19124736 (-)
LOC103043551 LOC108444285,LOC108273949 coding upstream 505643 19279986 ~ 19291010 (-)
LOC111192386 rac3b,rac3,LOC100712409,LOC107571767,LOC108444292,LOC106535622,LOC106610298 coding upstream 556324 19330667 ~ 19340948 (-)
lrrc45 lrrc45 coding upstream 567686 19342029 ~ 19353789 (-)
LOC103038385 prkar1ab,LOC103038385,LOC108444289,LOC107693667,LOC107708993,LOC107602422,LOC108274040 coding upstream 648557 19422900 ~ 19436284 (-)
G37612 plekhm1 non-coding downstream 89078 18615222 ~ 18620375 (-)
G37609 NA non-coding downstream 103804 18598257 ~ 18605649 (-)
G37606 scn4a,LOC108435052,LOC107654028 non-coding downstream 121975 18581426 ~ 18587478 (-)
G37605 scn4a,LOC107664628,LOC107708946,LOC107654028,LOC107732174,LOC108435052 non-coding downstream 128137 18580885 ~ 18581316 (-)
G37604 scn4aa,LOC105894041,LOC107654028,LOC107732174,LOC107598592,LOC108435052 non-coding downstream 130741 18578434 ~ 18578712 (-)
G37667 LOC103035736,LOC108431365,LOC105007721,LOC103369715 non-coding upstream 40478 18814821 ~ 18824187 (-)
G37669 LOC108431393,LOC103369716 non-coding upstream 63425 18837768 ~ 18846662 (-)
G37671 NA non-coding upstream 85696 18860039 ~ 18862511 (-)
G37668 NA non-coding upstream 89833 18864176 ~ 18865557 (-)
G37676 NA non-coding upstream 91567 18865910 ~ 18866119 (-)
G37616 NA other downstream 74355 18633578 ~ 18635098 (-)
G37603 NA other downstream 136277 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 391496 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 913465 17789951 ~ 17795988 (-)
cntd1 NA other downstream 1004430 17692497 ~ 17705023 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 769882 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1043925 19818268 ~ 19825652 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 1737328 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 3098977 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 3239162 22013505 ~ 22038504 (-)

Expression


Co-expression Network