G37749


Basic Information

Item Value
gene id G37749
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19329368 ~ 19331661 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50913
ttctcatctaaaacagtgttttatatattccactttcactttcactcatTCACGGAAATGTCTTTTGGCAGCTGTGAACATCATTCCTCTCCTCCAGCTCCAGAAACACTGTAGTTACGCTGTAGCACCTGTGCAGGAGGACACTGCTagtgaccacacacacacacacaaacataaaagcTCTCTTTttgtcctctctctttctctctctccctcacacacactcacagagacacagagcaaATGCTCACgtccacacaaaacacaaacaagtggAGTGTATTCCAAAGTGGACCCAATTTTGGGGGCAGGAAAGCATCTTACATAGATTACACAGATTGTATTTAGATCTAGTTTTGCTGGAATATATTTACTctggattatatatttttcctgtgGATCAACTTCCCAGCATAACCAGATGATAATtcttttatctaaaaaaaaaaaaaaaaaaaagcatatcaTCCAACTATCCATCTATCAAACACTTGCCTGACTGAAGGGAAATTGAACTAAATTTCGAAAACtttatcttaattaaatgattaGTATGTGAATTCAGAGTGGGTTTGGTATAAAATACTCTGTTCTAGAGAAACTTACCAGGTCAGAACTCTACAAACTCTAAAAGCTCCCTCACAGAAAGTTAATTCACCAAAGAATTCTGGttataaatacactgcctgatgcCTGAcaagatgttttaaaaattgcacATCATTAAAATGCTAAAAGGATGCATGCATGTGTTGTgcggcaatatatatatatacacagcactgtgcaaaagttttaggcaccaaagttaattacactaatccatttaatCCATCTCAGCAATacgagtgtttttacctgaaaaagcaccacatatgatttgaacagacgcaaataaacataaatacagtaaaacgtaacaaagaattctcatttttaactaagtatgttcaATCCTGTGAgtcgagctgaagaacaaagtgtagagatttcagatttctcctggatgatttccctcagccagcatgtgaataatatgttcagttccatcagcagctcacctgatttaccacatttaccagtaatttaccaaaccaggtgttgattaatatgatgagaactagaaattaaactctattaaactcagatgaggaggagagattaggagatgttagGAATGTTTTTTAAGGaaagaaaacagggctgtaaaagtcttttctgctttttgtaaaattgcagtttgtatttattttattgtaacgCAGAatgtagtgttttactgagctaataaacacttactgacCAGATAAGAACtgcactttttctttactgaaattcccacaggtgcctaaaactattcctgaatactgtatatagtcCCAACAGAAAACGCATTTGATCAGATTTGCCACTATTTTACCATCATCAACATTACAAACCTGTGGTTTGTTCTAGAGCCAACAGGAGCAGAACCGATATCAAGGACATGTGAGCGTTCTATGCAACCATCTAAACATGTAGCCAGTCCAGTAGCCCACGCCACTGTTCTTCTCACAAGcatgtcaacacacacacacacacacacacacacacacactgtgatcaCCAGAAAACATAGTGAAAGGGACGTCGTGTCGTGGTGTGAAAGGGAAAGCAAGCACGGACTTAAAAAAGCCATCTACCACAATGTTTCTGACCAAACAACACCCCTCGGCTCAAACCATGCCAACGACTcgcgtaaacacacacacacacacacacacacacacacacacacatatatacactttctcacacacatgTATTAACTCTACACATGGAAAAAAACCTCGGGAAACTGAGGCGTCTGTCTCAGAGCCTGACGGACGTAGTGTTTGGTGTAGGACTCTCTCAGTGGAGAATCCTACCGCTGTAGTGTtgagcaatgtgtgtgtgtgtgtgtgtgtgtgttggggtggggCAGGAAGCTGCTGGGACCTTCCTCCAGGTCGTCCCAGCGTTCAGAACAGGGTGCACCTCTTTCCTCGCTTCTTAACAGGCGGGGGGCAGAGGACGGCCCGGATAGCCTCATCAAACACGGTCTTCAGGCCACGCTGGGTCAGAGCTGAGCATTCCAGATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50913 True 2122 TUCP 0.41 2 19329368 19331661

Neighbor

gene id symbol gene type direction distance location
dcxr dcxr coding upstream 545 19317712 ~ 19328823 (+)
rfng rfng,LOC106610281 coding upstream 18225 19293604 ~ 19311143 (+)
LOC103043248 col1a1b,LOC108444293,LOC108273947,LOC107708989 coding upstream 51681 19249148 ~ 19277687 (+)
LOC103037098 LOC108425932 coding upstream 147121 19170742 ~ 19182247 (+)
LOC103042924 NA coding upstream 160286 19161544 ~ 19169082 (+)
LOC103044175 NA coding downstream 30160 19361821 ~ 19385854 (+)
fam20a fam20a coding downstream 59781 19391442 ~ 19418752 (+)
LOC103038698 zdhhc16,zdhhc16b,LOC108444288,LOC108273908,LOC107602426 coding downstream 104700 19436361 ~ 19455353 (+)
LOC103040580 mapk8b,mapk8,LOC108437314,LOC107709004,LOC106962379,LOC106579004,LOC103040580,LOC108274025,LOC107720002,LOC107388204,LOC107653969,LOC101073575 coding downstream 377004 19708665 ~ 19734677 (+)
LOC103042203 NA coding downstream 508645 19840306 ~ 19849320 (+)
G37735 NA non-coding upstream 114550 19214568 ~ 19214818 (+)
LOC111192409 NA non-coding upstream 365332 18963237 ~ 18964036 (+)
G37652 NA non-coding upstream 516417 18812739 ~ 18812951 (+)
G37592 NA non-coding upstream 688273 18589222 ~ 18641095 (+)
G37557 NA non-coding upstream 856795 18470159 ~ 18472573 (+)
G37751 NA non-coding downstream 10438 19342099 ~ 19342794 (+)
G37767 NA non-coding downstream 142961 19474622 ~ 19476578 (+)
G37862 NA non-coding downstream 325844 19657505 ~ 19658477 (+)
G37861 NA non-coding downstream 371587 19703248 ~ 19739691 (+)
G37882 NA non-coding downstream 409208 19740869 ~ 19741119 (+)
LOC103022762 NA other upstream 621640 18645635 ~ 18707728 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other upstream 953023 18371378 ~ 18376345 (+)
G37404 NA other upstream 1215442 18107564 ~ 18113926 (+)
LOC103046566 NA other upstream 1229389 18063983 ~ 18099979 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other upstream 1358369 17961940 ~ 17970999 (+)
G37812 mms19,LOC106578995 other downstream 149395 19481056 ~ 19484915 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other downstream 157238 19488899 ~ 19511441 (+)
G37943 NA other downstream 824067 20155728 ~ 20158339 (+)
G38079 kif22,LOC107664627 other downstream 1687508 21019169 ~ 21030797 (+)
lgi1 lgi1,lgi1b,LOC107743957,LOC107664615,LOC107598600,LOC107654035,LOC107708938 other downstream 1777419 21109080 ~ 21128764 (+)

Expression


Co-expression Network