G37751


Basic Information

Item Value
gene id G37751
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19342099 ~ 19342794 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50915
GACCTGTCTTTCATTCACTACCAGCAAACAACAGAAAATTCAaaactctctatttctctctcagtttttgtccaaaatatggattaaatattatttgttgCATTTGTTCCAAAAAAGCCTTGCTTGAAATGGCTTATCCTGAGATATCGGCTGGTTAGGGTGAAgaggtttaataaaataatttattcatgttgaagagaaaaaaaaatcataataccACACCAAAGATATATGCATATCGGTAAGAATATCATCGCTGTGACTGTACTGTTTGAAAACACCAGCTCTGCTTTACAGCATGTAAACATTCCacgatgaatggaccaatataatgctctaaatgatatcTCATCTTTATAGCTGTGTGATATGTCATCGTATTTACAATGTACAAATTCATAAGACACAATAAGACCACCCAGGTGTATTTATGGAGGAAACTGGAGTCTCTGTCTCCAGCGGGTTATTTTTTGGGACTGAGGTGTCCCAGCGTGGAGCCCTGGACGTACGTAAGGATAGCGTTCTGAAGGAAGCTGGCCCTCTGTGCCTCGTCTTCACGCATGCGCTGAATCTCGCCCTCCTTCATGCGCAGACGCTCCAGCAGAGACGATATCTCACTCTCTTTATCCAGAAGAGCCTCGCGGTGGGAGGTACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50915 True 657 lncRNA 0.41 2 19342099 19342794

Neighbor

gene id symbol gene type direction distance location
dcxr dcxr coding upstream 13276 19317712 ~ 19328823 (+)
rfng rfng,LOC106610281 coding upstream 30956 19293604 ~ 19311143 (+)
LOC103043248 col1a1b,LOC108444293,LOC108273947,LOC107708989 coding upstream 64412 19249148 ~ 19277687 (+)
LOC103037098 LOC108425932 coding upstream 159852 19170742 ~ 19182247 (+)
LOC103042924 NA coding upstream 173017 19161544 ~ 19169082 (+)
LOC103044175 NA coding downstream 19027 19361821 ~ 19385854 (+)
fam20a fam20a coding downstream 48648 19391442 ~ 19418752 (+)
LOC103038698 zdhhc16,zdhhc16b,LOC108444288,LOC108273908,LOC107602426 coding downstream 93567 19436361 ~ 19455353 (+)
LOC103040580 mapk8b,mapk8,LOC108437314,LOC107709004,LOC106962379,LOC106579004,LOC103040580,LOC108274025,LOC107720002,LOC107388204,LOC107653969,LOC101073575 coding downstream 365871 19708665 ~ 19734677 (+)
LOC103042203 NA coding downstream 497512 19840306 ~ 19849320 (+)
G37735 NA non-coding upstream 127281 19214568 ~ 19214818 (+)
LOC111192409 NA non-coding upstream 378063 18963237 ~ 18964036 (+)
G37652 NA non-coding upstream 529148 18812739 ~ 18812951 (+)
G37592 NA non-coding upstream 701004 18589222 ~ 18641095 (+)
G37557 NA non-coding upstream 869526 18470159 ~ 18472573 (+)
G37767 NA non-coding downstream 131828 19474622 ~ 19476578 (+)
G37862 NA non-coding downstream 314711 19657505 ~ 19658477 (+)
G37861 NA non-coding downstream 360454 19703248 ~ 19739691 (+)
G37882 NA non-coding downstream 398075 19740869 ~ 19741119 (+)
G37930 NA non-coding downstream 547721 19890515 ~ 19963972 (+)
G37749 NA other upstream 10438 19329368 ~ 19331661 (+)
LOC103022762 NA other upstream 634371 18645635 ~ 18707728 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other upstream 965754 18371378 ~ 18376345 (+)
G37404 NA other upstream 1228173 18107564 ~ 18113926 (+)
LOC103046566 NA other upstream 1242120 18063983 ~ 18099979 (+)
G37812 mms19,LOC106578995 other downstream 138262 19481056 ~ 19484915 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other downstream 146105 19488899 ~ 19511441 (+)
G37943 NA other downstream 812934 20155728 ~ 20158339 (+)
G38079 kif22,LOC107664627 other downstream 1676375 21019169 ~ 21030797 (+)
lgi1 lgi1,lgi1b,LOC107743957,LOC107664615,LOC107598600,LOC107654035,LOC107708938 other downstream 1766286 21109080 ~ 21128764 (+)

Expression


Co-expression Network