Gene
RNA
| Item | Value |
|---|---|
| gene id | G52274 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 1974202 ~ 1975828 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59548 | False | 257 | lncRNA | 0.44 | 2 | 1974202 | 1975539 |
| TU59549 | True | 546 | lncRNA | 0.38 | 2 | 1974202 | 1975828 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_01954952_01964842 | SF3B1.S, SF3B1 | coding | downstream | 8965 | 1954559 ~ 1965237 (-) |
| CI01000009_01925054_01944771 | ANKRD44 | coding | downstream | 29431 | 1924935 ~ 1944771 (-) |
| CI01000009_01743393_01795392 | FGF14 | coding | downstream | 178741 | 1743118 ~ 1795461 (-) |
| CI01000009_01596212_01681960 | NALCN | coding | downstream | 292175 | 1595701 ~ 1682027 (-) |
| CI01000009_01550846_01564109 | TMTC4 | coding | downstream | 409034 | 1550784 ~ 1565168 (-) |
| CI01000009_01981245_01988092 | HSPD1 | coding | upstream | 4868 | 1980696 ~ 1988092 (-) |
| CI01000009_02001400_02018841 | RFTN2 | coding | upstream | 24628 | 2000456 ~ 2020641 (-) |
| CI01000009_02167959_02200058 | SATB2 | coding | upstream | 191535 | 2167363 ~ 2200058 (-) |
| CI01000009_02228671_02232977 | DNAJB11.S, DNAJB11 | coding | upstream | 251796 | 2227624 ~ 2232977 (-) |
| CI01000009_02237301_02238365 | NA | coding | upstream | 261473 | 2237301 ~ 2238872 (-) |
| G52267 | NA | non-coding | downstream | 80914 | 1892979 ~ 1893288 (-) |
| G52244 | NA | non-coding | downstream | 270810 | 1689072 ~ 1703392 (-) |
| G52157 | NA | non-coding | downstream | 523276 | 1446494 ~ 1450926 (-) |
| G52160 | NA | non-coding | downstream | 542637 | 1426074 ~ 1431565 (-) |
| CI01000009_01386589_01389680 | NA | non-coding | downstream | 583115 | 1383864 ~ 1390149 (-) |
| G52222 | NA | non-coding | upstream | 14793 | 1990621 ~ 1991986 (-) |
| G52230 | NA | non-coding | upstream | 118540 | 2094368 ~ 2096052 (-) |
| G52338 | NA | non-coding | upstream | 181584 | 2157412 ~ 2157746 (-) |
| G52342 | NA | non-coding | upstream | 239124 | 2214952 ~ 2215535 (-) |
| G52371 | NA | non-coding | upstream | 412486 | 2388314 ~ 2388539 (-) |
| G52098 | NA | other | downstream | 566575 | 1401932 ~ 1407627 (-) |
| G52410 | NA | other | upstream | 575896 | 2551724 ~ 2562533 (-) |
| CI01000009_02885473_02893975 | NA | other | upstream | 907860 | 2883688 ~ 2893975 (-) |
| CI01000009_03261739_03262843 | NA | other | upstream | 1285375 | 3261038 ~ 3262843 (-) |
| G52828 | NA | other | upstream | 2241592 | 4217420 ~ 4231469 (-) |
