G37834


Basic Information

Item Value
gene id G37834
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19521071 ~ 19521393 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51041
TGCTATAGGCcaaatgggaggagctaaaatGCTGTTGACTGAATGGGTGGTGCTGAACTGCGGTAGATCaaatgggtggagttaaactgctgtagaccaAATGAGTGGGCTCTAAACTACTGTAAATTGAGTGGGTAGTCTGTatgggaggggctaaactgctgtaagctaTAAGAGTGAGGCTACTCTGTGGTAGACCAAATGGGTGAAGCTAAACAGTTggaggctgaatgggtggagctaaacctCTGTCACCCAAATGGGTGGAGCTcaactgctgtaggctgtatATTAGGGGTTAAAATGCTGTAAGCTATAAGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51041 True 323 lncRNA 0.46 1 19521071 19521393

Neighbor

gene id symbol gene type direction distance location
mms19 mms19,LOC107578808 coding downstream 33824 19457300 ~ 19487247 (-)
LOC103038385 prkar1ab,LOC103038385,LOC108444289,LOC107693667,LOC107708993,LOC107602422,LOC108274040 coding downstream 84787 19422900 ~ 19436284 (-)
lrrc45 lrrc45 coding downstream 167282 19342029 ~ 19353789 (-)
LOC111192386 rac3b,rac3,LOC100712409,LOC107571767,LOC108444292,LOC106535622,LOC106610298 coding downstream 180123 19330667 ~ 19340948 (-)
LOC103043551 LOC108444285,LOC108273949 coding downstream 230061 19279986 ~ 19291010 (-)
rbp3 LOC108437312 coding upstream 82848 19604241 ~ 19606942 (-)
LOC103040263 NA coding upstream 95018 19616411 ~ 19623377 (-)
LOC103045380 NA coding upstream 106207 19627600 ~ 19632328 (-)
frmpd2 LOC108437313 coding upstream 157056 19678449 ~ 19708609 (-)
LOC103041296 LOC108437306,LOC108274024 coding upstream 219740 19741133 ~ 19780495 (-)
G37828 ubtd1b,ubtd1,LOC108437310,LOC107693664,LOC107720068 non-coding downstream 6468 19509466 ~ 19514603 (-)
G37829 ubtd1,LOC106578996,LOC103038242 non-coding downstream 12489 19489836 ~ 19508582 (-)
G37775 NA non-coding downstream 140139 19261479 ~ 19380932 (-)
G37771 col1a3,LOC108444293,LOC106610502,LOC106589632 non-coding downstream 168594 19275151 ~ 19352477 (-)
G37776 col1a1b,LOC108444293,LOC108273947 non-coding downstream 255892 19262976 ~ 19265179 (-)
G37895 NA non-coding upstream 136126 19657519 ~ 19658113 (-)
G37916 NA non-coding upstream 255504 19776897 ~ 19792611 (-)
G37893 NA non-coding upstream 277184 19798577 ~ 19799242 (-)
G37921 NA non-coding upstream 279167 19800560 ~ 19800813 (-)
G37920 NA non-coding upstream 279555 19800948 ~ 19801247 (-)
G37616 NA other downstream 885973 18633578 ~ 18635098 (-)
G37603 NA other downstream 947895 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 1203114 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 1725083 17789951 ~ 17795988 (-)
cntd1 NA other downstream 1816048 17692497 ~ 17705023 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 22832 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 296875 19818268 ~ 19825652 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 990278 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 2351927 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 2492112 22013505 ~ 22038504 (-)

Expression


Co-expression Network