G37921


Basic Information

Item Value
gene id G37921
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19800560 ~ 19800813 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51146
taaaacacggcattaataacttaaaaattgcacaagaagcttattaaaaacactgtttacatcccataatgctagcttcagctccgagcgcctccatcactgtactgataataacatagacacacatatatatatatatatatatatatatatatatatatacatagctTATACGTAGCAGCCGGCACCAgaaggcaggctatgcggaatctatgtatatatgtctatgtcattatcagtacaaagTTATCAGC

Function

NR:

description
PREDICTED: transcription elongation factor, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51146 True 254 lncRNA 0.33 1 19800560 19800813

Neighbor

gene id symbol gene type direction distance location
LOC103041296 LOC108437306,LOC108274024 coding downstream 20065 19741133 ~ 19780495 (-)
frmpd2 LOC108437313 coding downstream 91951 19678449 ~ 19708609 (-)
LOC103045380 NA coding downstream 168232 19627600 ~ 19632328 (-)
LOC103040263 NA coding downstream 177183 19616411 ~ 19623377 (-)
rbp3 LOC108437312 coding downstream 193618 19604241 ~ 19606942 (-)
LOC103041897 vstm4,LOC108437315,LOC107720466,LOC107708899,LOC107653934 coding upstream 1189 19802002 ~ 19816181 (-)
LOC111192421 NA coding upstream 51071 19851884 ~ 19858626 (-)
LOC103037418 LOC108274018,LOC108413479,LOC107726266,LOC107719913 coding upstream 934490 20735303 ~ 20781329 (-)
cops3 cops3 coding upstream 983116 20783929 ~ 20797947 (-)
rasd1 rasd1,LOC108412952,LOC107653935,LOC107720458,LOC107602420 coding upstream 1065987 20866800 ~ 20869080 (-)
G37893 NA non-coding downstream 1318 19798577 ~ 19799242 (-)
G37916 NA non-coding downstream 7949 19776897 ~ 19792611 (-)
G37895 NA non-coding downstream 142447 19657519 ~ 19658113 (-)
G37834 NA non-coding downstream 279167 19521071 ~ 19521393 (-)
G37828 ubtd1b,ubtd1,LOC108437310,LOC107693664,LOC107720068 non-coding downstream 285957 19509466 ~ 19514603 (-)
G37920 NA non-coding upstream 135 19800948 ~ 19801247 (-)
G37927 NA non-coding upstream 48060 19848873 ~ 19849320 (-)
G37928 NA non-coding upstream 50434 19851247 ~ 19851472 (-)
G37929 NA non-coding upstream 50731 19851544 ~ 19851803 (-)
G37934 NA non-coding upstream 175695 19976508 ~ 19976726 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 199276 19544225 ~ 19601284 (-)
G37616 NA other downstream 1165462 18633578 ~ 18635098 (-)
G37603 NA other downstream 1227384 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 1482603 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 2004572 17789951 ~ 17795988 (-)
c4h10orf128 NA other upstream 17455 19818268 ~ 19825652 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 710858 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 2072507 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 2212692 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 3579832 23380645 ~ 23387442 (-)

Expression


Co-expression Network