c4h10orf128


Basic Information

Item Value
gene id c4h10orf128
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19818268 ~ 19825652 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51149
CGAATGcaaccaacacacactaaagatATCTCCAGATCTAATCTTGAAACCATTACTCTACAACAGGAAATGGCTTCATTTCTTGAAGACAGCATGTTTGGTTGAAGACAGGTATCATCAGTACAATCCAACAAGAGACACAGCTAAAGATGTCTCTCACGCCCGACCATAAACGACATCCCTGCGCTTTCATATTCCTCTTCACTGTGGATACGCTGTTGAAGCAGGTAAGAGGAGACGGAAACTCGTCCAGTGATGAACCAGAAGTGAAATACGCACTGATAGGAGCTGGGATCGGACTGATCTTCGCAGCGTGCTTCATCGCAGTTAAGGTCTGCATGATTAAACGTCACATGCTCGACAATGAGCCATCGGAGGACTCATTCAGAAGACCATCTCTACAGTACAGAGTCACTGAAATGGACAGCAGGATCTCCTGATAGATGTAGAACCTACATTTCCAGCTGTTCTGTGTGCCTATCTTTCGCTTTTATTCTGATGAGCCAGTTCTGCTGGAAACCGGAGGAACGCAACTTTAAAAAAGagaattttttgtattatgttaattattttctttcatttcttcatACAGTAAACTGTCAAATACATAGCAGTAATGTTCAATGTGACTGAAAGATTCTTGACATAGACCCTTTGATGTCATGTTGGGACAcgttgtgtaaaatgtaaataaatataatcaaaattaaatgaatgtaCTTATAAATTATCCACTGTTTATCCATTGTTATATCAAC
>XM_022669421.1
AACAGGAAATGGCTTCATTTCTTGAAGACAGCATGTTTGGTTGAAGACAGGTATCATCAGTACAATCCAACAAGAGACACAGCTAAAGATGTCTCTCACGCCCGACCATAAACGACATCCCTGCGCTTTCATATTCCTCTTCACTGTGGATACGCTGTTGAAGCAGGTAAGAGGAGACGGAAACTCGTCCAGTGATGAACCAGCCTCAGAAGTGAAATACGCACTGATAGGAGCTGGGATCGGACTGATCTTCGCAGCGTGCTTCATCGCAGTTAAGGTCTGCATGATTAAACGTCACATGCTCGACAATGAGCCATCGGAGGACTCATTCAGAAGACCATCTCTACAGTACAGAGTCACTGAAATGGACAGCAGGATCTCCTGATAGATGTAGAAC
>XM_022669422.1
AACAGGAAATGGCTTCATTTCTTGAAGACAGCATGTTTGGTTGAAGACAGGTATCATCAGTACAATCCAACAAGAGACACAGCTAAAGATGTCTCTCACGCCCGACCATAAACGACATCCCTGCGCTTTCATATTCCTCTTCACTGTGGATACGCTGTTGAAGCAGGTAAGAGGAGACGGAAACTCGTCCAGTGATGAACCAGAAGTGAAATACGCACTGATAGGAGCTGGGATCGGACTGATCTTCGCAGCGTGCTTCATCGCAGTTAAGGTCTGCATGATTAAACGTCACATGCTCGACAATGAGCCATCGGAGGACTCATTCAGAAGACCATCTCTACAGTACAGAGTCACTGAAATGGACAGCAGGATCTCCTGATAGATGTAGAAC

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU51149 True 758 TUCP 0.40 5 19818268 19825652
XM_022669421.1 False 397 mRNA 0.47 5 19818574 19825591
XM_022669422.1 False 391 mRNA 0.47 5 19818574 19825591

Neighbor

gene id symbol gene type direction distance location
LOC103041897 vstm4,LOC108437315,LOC107720466,LOC107708899,LOC107653934 coding downstream 2087 19802002 ~ 19816181 (-)
LOC103041296 LOC108437306,LOC108274024 coding downstream 37773 19741133 ~ 19780495 (-)
frmpd2 LOC108437313 coding downstream 109659 19678449 ~ 19708609 (-)
LOC103045380 NA coding downstream 185940 19627600 ~ 19632328 (-)
LOC103040263 NA coding downstream 194891 19616411 ~ 19623377 (-)
LOC111192421 NA coding upstream 26232 19851884 ~ 19858626 (-)
LOC103037418 LOC108274018,LOC108413479,LOC107726266,LOC107719913 coding upstream 909651 20735303 ~ 20781329 (-)
cops3 cops3 coding upstream 958277 20783929 ~ 20797947 (-)
rasd1 rasd1,LOC108412952,LOC107653935,LOC107720458,LOC107602420 coding upstream 1041148 20866800 ~ 20869080 (-)
pemt pemt,LOC107719881 coding upstream 1050782 20876434 ~ 20968546 (-)
G37920 NA non-coding downstream 17021 19800948 ~ 19801247 (-)
G37921 NA non-coding downstream 17455 19800560 ~ 19800813 (-)
G37893 NA non-coding downstream 19026 19798577 ~ 19799242 (-)
G37916 NA non-coding downstream 25657 19776897 ~ 19792611 (-)
G37895 NA non-coding downstream 160155 19657519 ~ 19658113 (-)
G37927 NA non-coding upstream 23221 19848873 ~ 19849320 (-)
G37928 NA non-coding upstream 25595 19851247 ~ 19851472 (-)
G37929 NA non-coding upstream 25892 19851544 ~ 19851803 (-)
G37934 NA non-coding upstream 150856 19976508 ~ 19976726 (-)
G37936 NA non-coding upstream 188494 20014146 ~ 20014354 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 216984 19544225 ~ 19601284 (-)
G37616 NA other downstream 1183170 18633578 ~ 18635098 (-)
G37603 NA other downstream 1245092 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 1500311 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 2022280 17789951 ~ 17795988 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 686019 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 2047668 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 2187853 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 3554993 23380645 ~ 23387442 (-)
LOC111192393 NA other upstream 3639567 23465219 ~ 23510619 (-)

Expression


Co-expression Network