G37929


Basic Information

Item Value
gene id G37929
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19851544 ~ 19851803 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51154
tgcaatgtcacaagatttatttcaatccagtgttgcattaatttttcaccaagatcttgcagcagcattgatgatggtagagtctgaccactgcacaaagcagctcttctccatccagcacatcccaaagattctcaatgaggttaaggtctggactctgtggtgaactctctctcaatccatgtgtgaaaatgatgatctcatgcttcctgaaCCCTGagctctttcacaattccagctccatgaatcctgatattgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51154 True 260 lncRNA 0.43 1 19851544 19851803

Neighbor

gene id symbol gene type direction distance location
LOC103041897 vstm4,LOC108437315,LOC107720466,LOC107708899,LOC107653934 coding downstream 35363 19802002 ~ 19816181 (-)
LOC103041296 LOC108437306,LOC108274024 coding downstream 71049 19741133 ~ 19780495 (-)
frmpd2 LOC108437313 coding downstream 142935 19678449 ~ 19708609 (-)
LOC103045380 NA coding downstream 219216 19627600 ~ 19632328 (-)
LOC103040263 NA coding downstream 228167 19616411 ~ 19623377 (-)
LOC111192421 NA coding upstream 81 19851884 ~ 19858626 (-)
LOC103037418 LOC108274018,LOC108413479,LOC107726266,LOC107719913 coding upstream 883500 20735303 ~ 20781329 (-)
cops3 cops3 coding upstream 932126 20783929 ~ 20797947 (-)
rasd1 rasd1,LOC108412952,LOC107653935,LOC107720458,LOC107602420 coding upstream 1014997 20866800 ~ 20869080 (-)
pemt pemt,LOC107719881 coding upstream 1024631 20876434 ~ 20968546 (-)
G37928 NA non-coding downstream 72 19851247 ~ 19851472 (-)
G37927 NA non-coding downstream 2224 19848873 ~ 19849320 (-)
G37920 NA non-coding downstream 50297 19800948 ~ 19801247 (-)
G37921 NA non-coding downstream 50731 19800560 ~ 19800813 (-)
G37893 NA non-coding downstream 52302 19798577 ~ 19799242 (-)
G37934 NA non-coding upstream 124705 19976508 ~ 19976726 (-)
G37936 NA non-coding upstream 162343 20014146 ~ 20014354 (-)
G37939 NA non-coding upstream 190216 20042019 ~ 20042337 (-)
G37941 NA non-coding upstream 196641 20048444 ~ 20048668 (-)
G37953 NA non-coding upstream 339605 20191408 ~ 20191686 (-)
c4h10orf128 NA other downstream 25892 19818268 ~ 19825652 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 250260 19544225 ~ 19601284 (-)
G37616 NA other downstream 1216446 18633578 ~ 18635098 (-)
G37603 NA other downstream 1278368 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 1533587 18282490 ~ 18317957 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 659868 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 2021517 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 2161702 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 3528842 23380645 ~ 23387442 (-)
LOC111192393 NA other upstream 3613416 23465219 ~ 23510619 (-)

Expression


Co-expression Network