G38338 (g6pc,g6pca.2,LOC107682718)


Basic Information

Item Value
gene id G38338
gene name g6pc,g6pca.2,LOC107682718
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 21873320 ~ 21878377 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51712
TGATAGATGACAAGAAAACTTTATtcatattttcagtgttttattattacaaatgggtcaaaaatagacatttttacagCAATAACATACacagacaaaagacaaaaaaaacaatggtacATAAGAGATGAGGgcagcattttctttcttttttttattattttttttctttaattttttttttgctgaaaataCTGTTTCTCACCTTTTTTAACTAAAACTTTCTTAACTAAATATATCTATCAGTCCGCAAAAACGAACCtcctctaaaataaaaacatttgtatACTTGGGCTCGACGCCAAGCCTATTCTCAGCACACGGTCTAAGGGCACTAAGACATAAGTTAtgagattaaataaaacagtcatctaaacacaatatttcattGTCCTGAGCAATAaacgacttttttttttttttttttttacaggctcTGCTTCTATCAGGATTGGAAATAAAGCCTCTTGTGTTAAATCCAAGTGCACGGAATAGAATACTTACAGAATACATGGAATTTGTTGTTGGACACAAGTTTTCGTTTGACAgtgagttttaaaaatatatgtatttaaagaTTGAAGCACCTGGAAATACTGCTAATAGTTTGTGATCATGTCCTGTGGTTTCCAGTTCTGCTCCTGGAGTCCACTTGCTGCCTGCACATTCTGGTGTTTTTCCTGTGTGTTCGAAGCAGGGAAAGCATCAAAATGTGCAGGCAAGTAAATGTGCATGGTTAGCCCTGCAGAGCGAGGTCTGGGAAACCCAGCATCCTCCACAAGTCCTCTTAAACCTTTAGAGCTGCTTTTTGCTCTGTAAGCTCATGGCTCCAGATAAGCAGTAGGGAATGATGCTGACGGTAACCAGGGGAACGGTGGCGCTCTTGCAGAAAGAGAGCAGGTAAAAGAGGGCGGCTGTGTGGGTTGGCGGTTTGATGGAGTCGAAGAGGTGCAGCAGGAACAGCGTGCTCACTATGCAGCCGATCCTGAAGGGGGCGCTACCGCTCCTTTTGCTTTCAGTGTAGAGCGGGGAGTGGAGCCCCAAGCCCAGGCCGAAGAGGGTGCCCATGTTGCGCAGCAGGCTGGCGAAGGGCGTGGTGTCCAGGTGGACCCAAGCTGGGTTGACACACCATTTTTGGGCCTTTTCCAGAGTCCAGAGGAGGTCCACGCCCATCGCTTTGAGGAGGACGTACAAGCCCACAGCGAACGAGAGCAAGAACAGAGTGATGTTGAAGTATTTCTGCAGACTGGCCTGGTAGATCCACTTCTGTCTGTTGAAGACTTCAGCCACGATCATACCTGCAAATACACAGATAATAAAATACCAGGTTATTCGTGCGAAAATACATCTAACCTCCTAGGCGCCTAGACATCACATTTTGGtttgtctagaccacaacacaAAATGTTGCTCTACAAAGGCCTGGTGTCCTCGTATGAGGCCAGTATACTGccacctagtggtggcagaagagtttaacacgTTAGAGTTTCGATTTGGCTCAGGAATTGAAGGGaacagtaaataaagtaaatgtttatgtttttaactTTGTCTTTGTGTCTTCCTGTTGAAGCAGCAAATGCTGCTGTGTttatgcacaaaataaatgtttcgcACATCTTTACTAATTGCgacttaaatataaaactaaagtcctcatatgtggacaacctttatttttagaactaaatatgtaaaaagtgaaataattCTTTGCatttacactaatcaggtgccaattagcccaaatagcaaaTAAAAAGTGTAGTGGATATCGGGTATTGTttgctgtatttttacagtttacacaAATTATTGAGATGCCCAATAAATACAGCATTTCCCAAGAATTTACTGGTGTTGTGAGACTAAACAACACATGTATCTACCACATGCAAAAGCATCATACATTTTACCTTATAGTAGACTCTAAAAGTAACCGAATAGTAACAGAATCtacttaatacattttaagcaacaacaTGCACTCGCTTTGTTTGGGTAGAGTTTACTCAattttttgagtaaatattacaTAAACTGAATCTTAAATGAAGACACAGTACAAAATGTTACTTTTCTTGATATGTTACATAAGTAGTATGATACACCTTTCCTATATGCCCCTGACATAATCTATTTGCATATAAGATGCAAGATATCTTTTATTGCACTCcgggtgcaaaaattcaagcagtgcaGTTGATGGCttgttgatggcttgtgatcatccatcttcctcttgattatattccagaggttttcaatttggtaaaatcaaagaaactcatcatttttttaaagggctGACTGCTTGGTCACAGTGTTGtgggctataagagcaagttaccatttccTTTACTGTGTAGTGTGAGTACTGGTACTGCACTGCTATAACTTTGCTACAGAGGACACTCATTAAAGCTGTGGTTTGAAAGGTTGAAATTAATCTATGTTTCTGAAATTTGAAGGtagaaaatctaattttaaagaaataaaattgacaaaaatgttgCCATTTAATAGATCACTTGCAACTATTACTACcataaaatgagaaatctgCGATGGCTGGCATTTTGAATAGAAAGTGTCTTAAGGTCCAGTACACTTGTATTTATACAGATTGCATAGACTGTGCTTGATTGAATTAGACAAAATTGAATATGACATTTTCTTAAACCTGTTTCTGAAGGCAAAACACGCCTTATTCAACCAATCCTCTCATTAAAAGCCCATGCAGAGTTACAGGGGTTCAGTTAGAGTTGGGGAATTCACTAAATGCAGTACATAATACCAGCATACCATAACCAGAATTAAGAATCACTGCTACTGTATGTGCTATAGTCCTATTTAGCGCATCTTAAAGAGTGTACAGTACAGTTGCTGTAACTGACCTGTAATAACACCAGCAATGACCTGATGAGGGAAGTGGGCTGCAATGAAGACCCTGGACAGACACACGCAAATCTGGACAGTCCAGAACAGCGCCCACAGGCTGCCTCGCAAGTAcctaacacaaaaaaataaaagacgtaatgttagctaatgcataaaaaaatcattaattggGATTGTTAGTTTTAGAACAAGCCTTCTATAAATGGAGTTTGTATTTACTTACATGGCTGAGGAGGATAGGGTCTTCTTGTTGCTCAGCAGGATGGCGAGGATAGACGTCACCATGGCGTAATAGACTCCAGCAGCTCCCATTGCATGCCCAGATGGACTCCTGGTCCCGTCTCACAGGTCATGGGAAACTGCTCGATGTGTGGCATGGAGGTGTTGCTGTAGTAAGGGGTCTCGTGGACCCACCAGTATGGGCGTTCTCCAAACAGGATCCTATAAATCAAAAAATAAGGAGCAAACATTACATACACATATGTGTTTACATGTAGTATTTCATCCCTACCTATATACCTATATAACAATCAGATTAACACATAAAATTAACATCAACCACGACTTACCATTTAAACACCAAGTTGAGCCAGTCTCCCACCACTGCCACCCATATAAGCTTGATGCCTACAGACTCCCTCAGATGGAACCAGATGGGAAAGAAGACGAAGAAGGTGTTCCTCAGGTCTGCAGCGAAGGATACGAAGAGGAACCAGCTCTGGGCGTCTCTGTAGTGGGTCTGCAGGTACTGGGTGCTGCTCACCCCATAGCCATGCATAGCATCCATGACTGTGTTCATCCTGAAGATGTTCCCTTTAGAGAAAGCTATCTGTCTGTGGATAAGAGAGATGCAACTGACAC

Function

symbol description
g6pc Enables glucose-6-phosphatase activity and phosphotransferase activity, alcohol group as acceptor. Acts upstream of or within several processes, including cholesterol homeostasis; glucose-6-phosphate transport; and glycogen catabolic process. Located in endoplasmic reticulum. Is expressed in liver; metanephros; and small intestine. Used to study glycogen storage disease I. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and type 2 diabetes mellitus. Orthologous to human G6PC1 (glucose-6-phosphatase catalytic subunit 1).

NR:

description
glucose-6-phosphatase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51712 True 3765 TUCP 0.40 2 21873320 21878377

Neighbor

gene id symbol gene type direction distance location
LOC103023948 LOC108443262 coding downstream 1818 21863489 ~ 21871502 (-)
LOC103032007 kat7,LOC108443263,LOC107708935,LOC107739754,LOC107598609,LOC107654043 coding downstream 31951 21828128 ~ 21841369 (-)
LOC103029147 LOC108443253 coding downstream 229293 21636090 ~ 21644027 (-)
LOC103040573 NA coding downstream 293553 21480761 ~ 21579767 (-)
LOC103039938 NA coding downstream 468763 21393788 ~ 21404557 (-)
aarsd1 aarsd1,LOC107739756,LOC107695514,LOC107708900 coding upstream 2665 21881042 ~ 21900740 (-)
LOC103046911 NA coding upstream 575410 22453787 ~ 22458181 (-)
pcdh15 pcdh15b,LOC108273410,LOC107695531,LOC107654051 coding upstream 609590 22487967 ~ 22923881 (-)
LOC111192391 LOC106675123,LOC107373546,LOC102213288,LOC106533383,LOC106676227,LOC106675084,LOC105893721 coding upstream 1112353 22990730 ~ 22994904 (-)
ipmk ipmk,LOC107708928,LOC107695532,LOC108248332 coding upstream 1464932 23343309 ~ 23372501 (-)
G38344 ptges3l,si:ch211-131k2.3,LOC107653952 non-coding downstream 20983 21844063 ~ 21852337 (-)
G38342 NA non-coding downstream 32521 21839794 ~ 21840799 (-)
G38302 NA non-coding downstream 94410 21778652 ~ 21778910 (-)
G38291 NA non-coding downstream 265018 21583616 ~ 21608302 (-)
G38257 NA non-coding downstream 513758 21359154 ~ 21359562 (-)
G38356 NA non-coding upstream 72174 21950551 ~ 21953218 (-)
G38376 NA non-coding upstream 174982 22053359 ~ 22053657 (-)
G38414 NA non-coding upstream 316754 22195131 ~ 22205071 (-)
G38421 NA non-coding upstream 416296 22294673 ~ 22354622 (-)
G38431 NA non-coding upstream 521752 22400129 ~ 22400519 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other downstream 1193889 20511671 ~ 20679431 (-)
c4h10orf128 NA other downstream 2047668 19818268 ~ 19825652 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 2272036 19544225 ~ 19601284 (-)
G37616 NA other downstream 3238222 18633578 ~ 18635098 (-)
G37603 NA other downstream 3300144 18572691 ~ 18573176 (-)
a1cf a1cf,LOC107654048 other upstream 135128 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 1502268 23380645 ~ 23387442 (-)
LOC111192393 NA other upstream 1586842 23465219 ~ 23510619 (-)
fam13c phyhipl,phyhiplb,fam13c other upstream 1804749 23683126 ~ 23720782 (-)
G38791 NA other upstream 1952941 23831318 ~ 23960895 (-)

Expression


Co-expression Network