Gene
RNA
| Item | Value |
|---|---|
| gene id | G39119 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 25208497 ~ 25208996 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU52718 | True | 248 | lncRNA | 0.50 | 2 | 25208497 | 25208996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103032189 | rpl19,LOC103032189,LOC107084780,LOC107567432,LOC102219718,LOC107670912,LOC107378566,LOC107754295 | coding | upstream | 182603 | 25022191 ~ 25025894 (+) |
| LOC103031867 | NA | coding | upstream | 187840 | 25016336 ~ 25020657 (+) |
| pkmyt1 | pkmyt1 | coding | upstream | 200470 | 24995486 ~ 25008027 (+) |
| pelo | pelo,LOC107653258 | coding | upstream | 342543 | 24848136 ~ 24865954 (+) |
| LOC103035674 | LOC108411004 | coding | upstream | 421787 | 24773731 ~ 24786710 (+) |
| LOC103022724 | NA | coding | downstream | 85257 | 25294253 ~ 25333929 (+) |
| LOC103022410 | NA | coding | downstream | 150463 | 25359459 ~ 25364883 (+) |
| LOC111192426 | NA | coding | downstream | 212329 | 25421325 ~ 25433217 (+) |
| LOC103024180 | tlk2,LOC108431425 | coding | downstream | 227459 | 25436455 ~ 25461136 (+) |
| brca1 | NA | coding | downstream | 269540 | 25478536 ~ 25534478 (+) |
| G38945 | patl2,tceb2,elob,LOC100708306,LOC102795145 | non-coding | upstream | 215519 | 24945980 ~ 24992978 (+) |
| G38947 | tgfb1i1 | non-coding | upstream | 246312 | 24959233 ~ 24962185 (+) |
| G38946 | NA | non-coding | upstream | 255521 | 24948785 ~ 24952976 (+) |
| G38905 | LOC108413689,LOC108274218,LOC101064018,LOC103392690 | non-coding | upstream | 369132 | 24835552 ~ 24839365 (+) |
| G38907 | NA | non-coding | upstream | 394660 | 24769159 ~ 24813837 (+) |
| G39123 | NA | non-coding | downstream | 9051 | 25218047 ~ 25218306 (+) |
| G39177 | NA | non-coding | downstream | 159783 | 25368779 ~ 25369315 (+) |
| G39185 | NA | non-coding | downstream | 204655 | 25413651 ~ 25413994 (+) |
| G39191 | NA | non-coding | downstream | 253770 | 25462766 ~ 25465369 (+) |
| G39204 | NA | non-coding | downstream | 332789 | 25541785 ~ 25545529 (+) |
| G38870 | NA | other | upstream | 591045 | 24616784 ~ 24617452 (+) |
| G38817 | NA | other | upstream | 1233977 | 23974161 ~ 23974520 (+) |
| trnar-ccu_27 | NA | other | upstream | 1458304 | 23750121 ~ 23750193 (+) |
| trnar-ccu_26 | NA | other | upstream | 1458406 | 23750019 ~ 23750091 (+) |
| trnar-ccu_25 | NA | other | upstream | 1458508 | 23749917 ~ 23749989 (+) |
| G39179 | NA | other | downstream | 165963 | 25374959 ~ 25375344 (+) |
