Gene
RNA
| Item | Value |
|---|---|
| gene id | G52371 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 2388314 ~ 2388539 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59660 | True | 226 | lncRNA | 0.43 | 1 | 2388314 | 2388539 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_02358636_02361913 | HPX | coding | downstream | 26365 | 2358470 ~ 2361949 (-) |
| CI01000009_02352214_02356619 | NA | coding | downstream | 31473 | 2352214 ~ 2356841 (-) |
| CI01000009_02327693_02335035 | NA | coding | downstream | 53279 | 2327693 ~ 2335035 (-) |
| CI01000009_02300395_02301213 | OLIG2 | coding | downstream | 86677 | 2300109 ~ 2301637 (-) |
| CI01000009_02286191_02288884 | OLIG1 | coding | downstream | 99333 | 2286160 ~ 2288981 (-) |
| CI01000009_02391182_02393863 | NA | coding | upstream | 1906 | 2390445 ~ 2393863 (-) |
| CI01000009_02403219_02417215 | FAM160A2 | coding | upstream | 14617 | 2403156 ~ 2417215 (-) |
| CI01000009_02591882_02593586 | RPL8.S, RPL8 | coding | upstream | 203324 | 2591863 ~ 2593761 (-) |
| CI01000009_02610459_02610721 | NA | coding | upstream | 221721 | 2610260 ~ 2610721 (-) |
| CI01000009_02654102_02655554 | CASK | coding | upstream | 265563 | 2654102 ~ 2656438 (-) |
| G52342 | NA | non-coding | downstream | 172779 | 2214952 ~ 2215535 (-) |
| G52338 | NA | non-coding | downstream | 230568 | 2157412 ~ 2157746 (-) |
| G52230 | NA | non-coding | downstream | 292262 | 2094368 ~ 2096052 (-) |
| G52222 | NA | non-coding | downstream | 396328 | 1990621 ~ 1991986 (-) |
| G52274 | NA | non-coding | downstream | 412486 | 1974202 ~ 1975828 (-) |
| G52328 | NA | non-coding | upstream | 11275 | 2399814 ~ 2400894 (-) |
| G52330 | NA | non-coding | upstream | 12496 | 2401035 ~ 2401380 (-) |
| G52378 | NA | non-coding | upstream | 38710 | 2427249 ~ 2427848 (-) |
| G52379 | NA | non-coding | upstream | 59827 | 2448366 ~ 2451640 (-) |
| G52440 | NA | non-coding | upstream | 124418 | 2512957 ~ 2513671 (-) |
| G52098 | NA | other | downstream | 980687 | 1401932 ~ 1407627 (-) |
| G52410 | NA | other | upstream | 163185 | 2551724 ~ 2562533 (-) |
| CI01000009_02885473_02893975 | NA | other | upstream | 495149 | 2883688 ~ 2893975 (-) |
| CI01000009_03261739_03262843 | NA | other | upstream | 872664 | 3261038 ~ 3262843 (-) |
| G52828 | NA | other | upstream | 1828881 | 4217420 ~ 4231469 (-) |
| G53515 | NA | other | upstream | 3113856 | 5502395 ~ 5505248 (-) |
