G39179


Basic Information

Item Value
gene id G39179
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 25374959 ~ 25375344 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU52796
gctgacagatgttctcacggacatcttcaacatctccctgtgcagcgccactgtcccaacgtgcctcaagtccaccaccatcgtccccgtgctgaagaagtccacagtgtcctgcctcaatgactaccgtcccgttgcacttacacccatcatcatgaagtgcttcgagaggctagtcatgaggaacatcaagacacaactgccctcttcactggaccccctgcagtttgcgtatcatcccaatcgctccacggacgatgccatcaccaccacccttcatctctccctcacccacctggagaagaaggacacttacgtcagaatgctgtttatagacttcagttcagcattcaacaccatcatcccacagaacctcaccaggaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52796 True 386 TUCP 0.53 1 25374959 25375344

Neighbor

gene id symbol gene type direction distance location
LOC103022410 NA coding upstream 10076 25359459 ~ 25364883 (+)
LOC103022724 NA coding upstream 41030 25294253 ~ 25333929 (+)
LOC103032189 rpl19,LOC103032189,LOC107084780,LOC107567432,LOC102219718,LOC107670912,LOC107378566,LOC107754295 coding upstream 349065 25022191 ~ 25025894 (+)
LOC103031867 NA coding upstream 354302 25016336 ~ 25020657 (+)
pkmyt1 pkmyt1 coding upstream 366932 24995486 ~ 25008027 (+)
LOC111192426 NA coding downstream 45981 25421325 ~ 25433217 (+)
LOC103024180 tlk2,LOC108431425 coding downstream 61111 25436455 ~ 25461136 (+)
brca1 NA coding downstream 103192 25478536 ~ 25534478 (+)
G39177 NA non-coding upstream 5644 25368779 ~ 25369315 (+)
G39123 NA non-coding upstream 156653 25218047 ~ 25218306 (+)
G39119 NA non-coding upstream 165963 25208497 ~ 25208996 (+)
G38945 patl2,tceb2,elob,LOC100708306,LOC102795145 non-coding upstream 381981 24945980 ~ 24992978 (+)
G38947 tgfb1i1 non-coding upstream 412774 24959233 ~ 24962185 (+)
G39185 NA non-coding downstream 38307 25413651 ~ 25413994 (+)
G39191 NA non-coding downstream 87422 25462766 ~ 25465369 (+)
G39204 NA non-coding downstream 166441 25541785 ~ 25545529 (+)
G39205 NA non-coding downstream 170770 25546114 ~ 25546488 (+)
G39211 rnd2,LOC108273785,LOC105030587,LOC106579157 non-coding downstream 201214 25576558 ~ 25631978 (+)
G38870 NA other upstream 757507 24616784 ~ 24617452 (+)
G38817 NA other upstream 1400439 23974161 ~ 23974520 (+)
trnar-ccu_27 NA other upstream 1624766 23750121 ~ 23750193 (+)
trnar-ccu_26 NA other upstream 1624868 23750019 ~ 23750091 (+)
trnar-ccu_25 NA other upstream 1624970 23749917 ~ 23749989 (+)

Expression


Co-expression Network