LOC103038698 (zdhhc16,zdhhc16b,LOC108444288,LOC108273908,LOC107602426)


Basic Information

Item Value
gene id LOC103038698
gene name zdhhc16,zdhhc16b,LOC108444288,LOC108273908,LOC107602426
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 19436361 ~ 19455353 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007233563.3
tattttgaaatTGAGTCAAATCGCTCACATGAAGCCGTAGAGCGGTGAACTGAACGGGGGTTCTTAGCTAAATTTAACCttaattctttattatttagaaatgtCTTAAAGGCCAGCTCCGTGATGAACACGTTCCTGACTTTTTAAGGAACCATTATTGggagGGGGGGATGCGCAGCTGGAGGTGGTATTTCTCCCGGGTCATGCACCTCTCCCTGCGCTGGTTCCGGCTGTGTCCTCGGCGGAGGCGGCCCAAGCGGCCCGGAAGAATCCGGGATCTGTGGAACTACGGAAAAGTCGTCCTCAACTCCCTCTACTTCAACACCCTCTCCAACTGGGACACGGTGCTCGACTCCATGTTCGAGCCCGTTTACTGGCTGGTGGATAACCTGACCCGCTGGTTCGGGGTGGTGTTTGTGTGCCTGGTGATTGCCCTCACCAGCTCTGTGGTGGTGATAGTGTATCTCTGCGTGATCCCGCTGATCATAGAGACCTACCCCGCTCACTGGATCCTCTGGCACCTCTGTTACGGCCACTGGAACCTCGTAATGGTGGTCTTTCACTATTACAAAGCCTCTACAACCTCACCCGGATACCCACCACAGGAGAAGAGTGATATTCCAACAGTGACCATCTGTAAGAAATGTATTGTTCCCAAACCGGCCAGAACACACCACTGCAGCATCTGCAACACGTGTGTTTTGAAAATGGACCATCATTGTCCCTGGCTAAATAACTGCGTGGGCCACTTTAACCATCGCTACTTCTTCTCCTTCTGCCTCTATATGACCATGGGCTGCATCTACTGCAGCATCAGCGCCAAAGACATGTTCCTGGATGCTTATAATGCCATCGAGAGCTACTATcagactcctcctcctccgttTACGTCTCACGAGAGGTTGTTTCATAAGAGCCTTCTTTACCTGTGGGTTCTTACCAGCTCGGTGGCGATGGCTTTGGGAGCCCTGACCATCTGGCACGCCGTGCTGATCACCAGAGGAGAGACCAGCGTGGAGAGACACATCAACCGTAAAGAGAGAAGACGACTGAGAGAGAGGGGCAAGGTGTTCCGGAATCCATATCACAACGGGAGAATAAACAACTGGAAAATCCTGTTTGGTGTAGAGAAGAGCAGtcACTGGTTAACACGGGTGCTCTTACCGTCCAACCATCCACCTCATGGAGATGGGATCACCTGGGACAGTCCTCCACACAGAAAGGAGCCTGAGGCAATATGA
>XM_022669304.1
ATGCGCAGCTGGAGGTGGTATTTCTCCCGGGTCATGCACCTCTCCCTGCGCTGGTTCCGGCTGTGTCCTCGGCGGAGGCGGCCCAAGCGGCCCGGAAGAATCCGGGATCTGTGGAACTACGGAAAAGTCGTCCTCAACTCCCTCTACTTCAACACCCTCTCCAACTGGGACACGGTGCTCGACTCCATGTTCGAGCCCGTTTACTGGCTGGTGGATAACCTGACCCGCTGGTTCGGGGTGGTGTTTGTGTGCCTGGTGATTGCCCTCACCAGCTCTGTGGTGGTGATAGTGTATCTCTGCGTGATCCCGCTGATCATAGAGACCTACCCCGCTCACTGGATCCTCTGGCACCTCTGTTACGGCCACTGGAACCTCGTAATGGTGGTCTTTCACTATTACAAAGCCTCTACAACCTCACCCGGATACCCACCACAGGAGAAGAGTGATATTCCAACAGTGACCATCTGTAAGAAATGTATTGTTCCCAAACCGGCCAGAACACACCACTGCAGCATCTGCAACACGTGTGTTTTGAAAATGGACCATCATTGTCCCTGGCTAAATAACTGCGTGGGCCACTTTAACCATCGCTACTTCTTCTCCTTCTGCCTCTATATGACCATGGGCTGCATCTACTGCAGCATCAGCGCCAAAGACATGTTCCTGGATGCTTATAATGCCATCGAGAGCTACTATcagactcctcctcctccgttTACGTCTCACGAGAGGTTGTTTCATAAGAGCCTTCTTTACCTGTGGGTTCTTACCAGCTCGGTGGCGATGGCTTTGGGAGCCCTGACCATCTGGCACGCCGTGCTGATCACCAGAGGAGAGACCAGCGTGGAGAGACACATCAACCGTAAAGAGAGAAGACGACTGAGAGAGAGGGGCAAGGTGTTCCGGAATCCATATCACAACGGGAGAATAAACAACTGGAAAATCCTGTTTGGTGTAGAGAAGAGCAGtcACTGGTTAACACGGGTGCTCTTACCGTCCAACCATCCACCTCATGGAGATGGGATCACCTGGGACAGTCCTCCACACAGAAAGGAGCCTGAGGCAATATGAACTTTGAGTCAGATAAGACGGACCCACATTTAAGTCCCGCCCTCCACGGGCAGTCGCCGCACTGCAGGCCGAGGAGAGTGAATCCGAACTACTGCGACGCTGTggtggctacgttcacattacaaacattaattcagattatttttttttttgtattattattttgcttagATCAATTCTCTCACCCTGCCTAAATATTTCCAAGAGTGATCTTTCCCTATATTACCCAGCATGCATTAGAAAAAATACGGAAATACATAATACTACCACTAGTAACCCTCGAAACAGCGATCAGATAGAAGGTGGGGGGATGGGGGGCAACATACATCATCAGAGGGTGTATAAAATGGAAAATCACATGCAATCACAGTGTCTctttaacccataagagcccagacccatttctgaatatttataCCAATTTCAAAACTGAATCAAATATATTCTAATTAATTGAGTAGCTTATTGCAGAAACatgaatgtaaatattttaagattaaaatCTTGATGTAACATAAATAAGACAACAGCAATTTCTTAACTATTATTAAAATCTGTTCTAGAATTTAGGTCAGAACTAGTTGTAGGGAActgaaaacattaatttaagcatttgaactattaaatttacatttacagcatttagctgacactcttatccagagtgacttacaaggttttTCCTATTACAGAGTTGTTAAGAGTTTTGCCCAGGGACTTTTATTTGTGTAGCCCAGCATTCAGTCTCCCAAAACGGGAATTAAACTGCAGTCTCCCACGCAATGTGATGGCAAGtaatggtgttatccactgcgccaccaCACCAAACACATAAATGGTTAAATCAAAGCAGTATAAGCAAATAATAGAagctagtttagttttatctccagcactattCCTAATGCAttcctacattctgtaaataaaggcAGATAAAGGAACACAGGCAGatttacacactgtcctgtagtgatgctctcaggatgtttagTATGTGTCATTTAGGGACTttatgagttaaagtgaagggCTGTAAAaaactttacacagcttttaaagggtctgtgacacaCGTCACCATGGGCTCTTCTGGGTTAAAAATCACATAACTGATTAATTATACTGACATGCCATATGTCACGGGACATCTAGAAATCTGCCACATCACATGGAATTTAAACAATGCTGCACTGATCTGTGGGATATGTCTAtgggcctcctgcattgaatttGTATGTTTATGGTATCTGCCGTAGTCTATTGTCTGTTCAgaaggacaattctagccagacaccgcctggtatgatcattaccacccactgcagtactgtatactgttcactgtgggtggtaataatgcCTTCTGTGATGTATTCACAGTTCAAATGTGATACTGTTGATCGGGAAATGTTAAATACCCACACAGCTTCAGAAATAGAACTTCCTCCCATCTGGCTCCTACAATTTGCCTTGTcgtgagcatgctggccagtgtttaacctcactcacaacgTATACAGGTGTGTTCATTCCCAAGGTGTCCCTAAATGTATAACACATGTTCGAGATCAATTGACATAATGCTATCTGGATCAGGCTACACATACCGTAAAAGACGTGGCTCGGATCTGATTTGCTCCCATTGGTCTGGTTTCCAGAAAAAGGATTAAAGCCCAGTCAGAGCAGAAATATCAGTTTTGCACCTGCAGCCtgataatgtgaacatagcctctGGTGTCAGCCTCGTCATGTGGAGAagctgtttttatgtgttttgtaccataatgtgtgtgtgtgtgtgtgtttgtgtgcgatTTAGGCGTTTAAGTGACTACTGTGACAGAAGTGAGCGAGTACCGAGTTCAGAAGCTGCACTTGGTGCCAAAGAGCTTTCAAAGACTCTTCTGTGAGAACTGTGTGAAAGTGGTTAGATCTTTGCTATTTATGAAAAATGTGCATATTTTATTGGGTACTGGAATGTCCAGCAATTTCCTAAAGGAGGTCCATGCATTTCattataacaaaacaaaacaaaaaaaaagtagttgcATCCAGAAGAAAGTGTATTTTTGCAATGCTGTTTGGAAGGAGGATTAGGAAGAAGGTTATCagaaattgattaattgattttgGTGTTAAGGGCGGCTATTGTAATAGTCTGTGTGCatgcagccgtctgccaatggtgcaGGCACTGTTTTGTAGCAAAGAGCATCTATGCTTGCTGTTGCATCTCTCCATGCATGGTGGACAATTTAAGACCATTCCTCGCTACGATACGACCCCTCGCAAGCTCTCTTCCAACAGCTCAAATTGCTTTTAAACTGTTCTCAGAGGCAGGCTTTGCTTGCAAAGGATGCTACCAACATAAGAGCACCAGGAATCAACCCTATATATATAGTCAGTAAGGTACAGCTGCTTATGTCACATGACCATCTGAGCTGAAACCTGAATCATTTGCATTTCTCATAATGTCAAATCTACCTACCAAATTTCATTCCTGttggttgattccttctgggtgcaactattttattttatttttttaacatgatgtgTGTAAAATCACGCAGCTTTCTAAACATACGGCTCCATTAGCATGCTAAAGATGCTAATGCTCTGggggttttttttccccagttgTGCCTTTAAACATATATGAAATCTCATGCAAATTTGTGCACAAGACTCCCAGGCCGATTCTGGATTCTTCACAGCTAAACTGACcattatatcattaaaaaactgCAGTACAGATCAA
>XM_022669305.1
tattttgaaatTGAGTCAAATCGCTCACATGAAGCCGTAGAGCGGTGAACTGAACGGGGGTTCTTAGCTAAATTTAACCttaattctttattatttagaaatgtCTTAAAGGCCAGCTCCGTGATGAACACGTTCCTGACTTTTTAAGGAACCATTATTGctttggctgTTAAGTCACTCTGTCCCAGTCTCCCAGTCTTCATACCCGCTCGCCAGCCTGCCCAGATCAGAACCAGCTCACTTTCACTCAGTGCTGAAGATGGAATTGATGAAGATGAGGATGTTTTAAGCCGATTTAATAagctttgttattttttttattgattttgacatttttaatgGAAGCAGAGGATTAGACTCTAGggagGGGGGGATGCGCAGCTGGAGGTGGTATTTCTCCCGGGTCATGCACCTCTCCCTGCGCTGGTTCCGGCTGTGTCCTCGGCGGAGGCGGCCCAAGCGGCCCGGAAGAATCCGGGATCTGTGGAACTACGGAAAAGTCGTCCTCAACTCCCTCTACTTCAACACCCTCTCCAACTGGGACACGGTGCTCGACTCCATGTTCGAGCCCGTTTACTGGCTGGTGGATAACCTGACCCGCTGGTTCGGGGTGGTGTTTGTGTGCCTGGTGATTGCCCTCACCAGCTCTGTGGTGGTGATAGTGTATCTCTGCGTGATCCCGCTGATCATAGAGACCTACCCCGCTCACTGGATCCTCTGGCACCTCTGTTACGGCCACTGGAACCTCGTAATGGTGGTCTTTCACTATTACAAAGCCTCTACAACCTCACCCGGATACCCACCACAGGAGAAGAGTGATATTCCAACAGTGACCATCTGTAAGAAATGTATTGTTCCCAAACCGGCCAGAACACACCACTGCAGCATCTGCAACACGTGTGTTTTGAAAATGGACCATCATTGTCCCTGGCTAAATAACTGCGTGGGCCACTTTAACCATCGCTACTTCTTCTCCTTCTGCCTCTATATGACCATGGGCTGCATCTACTGCAGCATCAGCGCCAAAGACATGTTCCTGGATGCTTATAATGCCATCGAGAGCTACTATcagactcctcctcctccgttTACGTCTCACGAGAGGTTGTTTCATAAGAGCCTTCTTTACCTGTGGGTTCTTACCAGCTCGGTGGCGATGGCTTTGGGAGCCCTGACCATCTGGCACGCCGTGCTGATCACCAGAGGAGAGACCAGCGTGGAGAGACACATCAACCGTAAAGAGAGAAGACGACTGAGAGAGAGGGGCAAGGTGTTCCGGAATCCATATCACAACGGGAGAATAAACAACTGGAAAATCCTGTTTGGTGTAGAGAAGAGCAGtcACTGGTTAACACGGGTGCTCTTACCGTCCAACCATCCACCTCATGGAGATGGGATCACCTGGGACAGTCCTCCACACAGAAAGGAGCCTGAGGCAATATGA
>XM_022669306.1
tttttatcttattaagtaaattaagtcattattttgagattctaaGTCGTTATCCTGATATTCTTAGtagttattttgagacactaagtcattCTTTTGAAATActttggctgTTAAGTCACTCTGTCCCAGTCTCCCAGTCTTCATACCCGCTCGCCAGCCTGCCCAGATCAGAACCAGCTCACTTTCACTCAGTGCTGAAGATGGAATTGATGAAGATGAGGATGTTTTAAGCCGATTTAATAagctttgttattttttttattgattttgacatttttaatgGAAGCAGAGGATTAGACTCTAGggagGGGGGGATGCGCAGCTGGAGGTGGTATTTCTCCCGGGTCATGCACCTCTCCCTGCGCTGGTTCCGGCTGTGTCCTCGGCGGAGGCGGCCCAAGCGGCCCGGAAGAATCCGGGATCTGTGGAACTACGGAAAAGTCGTCCTCAACTCCCTCTACTTCAACACCCTCTCCAACTGGGACACGGTGCTCGACTCCATGTTCGAGCCCGTTTACTGGCTGGTGGATAACCTGACCCGCTGGTTCGGGGTGGTGTTTGTGTGCCTGGTGATTGCCCTCACCAGCTCTGTGGTGGTGATAGTGTATCTCTGCGTGATCCCGCTGATCATAGAGACCTACCCCGCTCACTGGATCCTCTGGCACCTCTGTTACGGCCACTGGAACCTCGTAATGGTGGTCTTTCACTATTACAAAGCCTCTACAACCTCACCCGGATACCCACCACAGGAGAAGAGTGATATTCCAACAGTGACCATCTGTAAGAAATGTATTGTTCCCAAACCGGCCAGAACACACCACTGCAGCATCTGCAACACGTGTGTTTTGAAAATGGACCATCATTGTCCCTGGCTAAATAACTGCGTGGGCCACTTTAACCATCGCTACTTCTTCTCCTTCTGCCTCTATATGACCATGGGCTGCATCTACTGCAGCATCAGCGCCAAAGACATGTTCCTGGATGCTTATAATGCCATCGAGAGCTACTATcagactcctcctcctccgttTACGTCTCACGAGAGGTTGTTTCATAAGAGCCTTCTTTACCTGTGGGTTCTTACCAGCTCGGTGGCGATGGCTTTGGGAGCCCTGACCATCTGGCACGCCGTGCTGATCACCAGAGGAGAGACCAGCGTGGAGAGACACATCAACCGTAAAGAGAGAAGACGACTGAGAGAGAGGGGCAAGGTGTTCCGGAATCCATATCACAACGGGAGAATAAACAACTGGAAAATCCTGTTTGGTGTAGAGAAGAGCAGtcACTGGTTAACACGGGTGCTCTTACCGTCCAACCATCCACCTCATGGAGATGGGATCACCTGGGACAGTCCTCCACACAGAAAGGAGCCTGAGGCAATATGA

Function

symbol description
zdhhc16b Predicted to enable palmitoyltransferase activity. Predicted to be involved in protein palmitoylation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human ZDHHC16 (zinc finger DHHC-type palmitoyltransferase 16).
zdhhc16 Enables palmitoyltransferase activity. Involved in protein palmitoylation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus.

NR:

description
PREDICTED: probable palmitoyltransferase ZDHHC16

GO: NA

KEGG:

id description
K18932 ZDHHC; palmitoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007233563.3 False 1241 mRNA 0.51 10 19438044 19452589
XM_022669304.1 True 3835 mRNA 0.43 9 19443589 19455353
XM_022669305.1 False 1444 mRNA 0.50 11 19438044 19452589
XM_022669306.1 False 1388 mRNA 0.49 11 19436361 19452589

Neighbor

gene id symbol gene type direction distance location
fam20a fam20a coding upstream 17609 19391442 ~ 19418752 (+)
LOC103044175 NA coding upstream 50507 19361821 ~ 19385854 (+)
dcxr dcxr coding upstream 107538 19317712 ~ 19328823 (+)
rfng rfng,LOC106610281 coding upstream 125218 19293604 ~ 19311143 (+)
LOC103043248 col1a1b,LOC108444293,LOC108273947,LOC107708989 coding upstream 158674 19249148 ~ 19277687 (+)
LOC103040580 mapk8b,mapk8,LOC108437314,LOC107709004,LOC106962379,LOC106579004,LOC103040580,LOC108274025,LOC107720002,LOC107388204,LOC107653969,LOC101073575 coding downstream 253312 19708665 ~ 19734677 (+)
LOC103042203 NA coding downstream 384953 19840306 ~ 19849320 (+)
LOC103045523 LOC108437318 coding downstream 838886 20294239 ~ 20299561 (+)
LOC103030679 LOC108437319 coding downstream 1234313 20689666 ~ 20691726 (+)
LOC103031004 LOC103031004,LOC108274330,LOC108437322,LOC107726267,LOC107653975,LOC107693649,LOC107719927 coding downstream 1246907 20702260 ~ 20708857 (+)
G37751 NA non-coding upstream 93567 19342099 ~ 19342794 (+)
G37735 NA non-coding upstream 221543 19214568 ~ 19214818 (+)
LOC111192409 NA non-coding upstream 472325 18963237 ~ 18964036 (+)
G37652 NA non-coding upstream 623410 18812739 ~ 18812951 (+)
G37592 NA non-coding upstream 795266 18589222 ~ 18641095 (+)
G37767 NA non-coding downstream 19269 19474622 ~ 19476578 (+)
G37862 NA non-coding downstream 202152 19657505 ~ 19658477 (+)
G37861 NA non-coding downstream 247895 19703248 ~ 19739691 (+)
G37882 NA non-coding downstream 285516 19740869 ~ 19741119 (+)
G37930 NA non-coding downstream 435162 19890515 ~ 19963972 (+)
G37749 NA other upstream 104700 19329368 ~ 19331661 (+)
LOC103022762 NA other upstream 728633 18645635 ~ 18707728 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other upstream 1060016 18371378 ~ 18376345 (+)
G37404 NA other upstream 1322435 18107564 ~ 18113926 (+)
LOC103046566 NA other upstream 1336382 18063983 ~ 18099979 (+)
G37812 mms19,LOC106578995 other downstream 25703 19481056 ~ 19484915 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other downstream 33546 19488899 ~ 19511441 (+)
G37943 NA other downstream 700375 20155728 ~ 20158339 (+)
G38079 kif22,LOC107664627 other downstream 1563816 21019169 ~ 21030797 (+)
lgi1 lgi1,lgi1b,LOC107743957,LOC107664615,LOC107598600,LOC107654035,LOC107708938 other downstream 1653727 21109080 ~ 21128764 (+)

Expression


Co-expression Network