LOC103045384 (si:dkey-100n10.2,LOC108424892,LOC107758432,LOC107584158,LOC107661094,LOC108273498,LOC107727700)


Basic Information

Item Value
gene id LOC103045384
gene name si:dkey-100n10.2,LOC108424892,LOC107758432,LOC107584158,LOC107661094,LOC108273498,LOC107727700
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 457171 ~ 483231 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007234066.3
CACTAAATCCCATTCGCTCCGGAGATAGGTGATTGGCTTGGAtgcgcacacgcacacgcacacaccctcTCTCGCGCGCTCGCGTGCATCCCCCCCCTCTGGTCAACGTGGGCTCATCAGGAGCGCGAGTGCCGCAGTTTGCCCGGGCAGTGTAGTGGGTTagtcactactactactattgctgTTACTAATACAGCCTGGAACTGAGGATTCAGAAGCCCTGAACACGTGAACAGGACACACCAGACTGAGACCCAGGACTGTGGAACGGAGAAGAAGCTCATTCATGCAGTAGAGAGAGTAACTCAGTCTCTGCTTTTACATCTCAGTGCTGGATTACTTTGAGAGAAGACTCTGAAGGACTGAAGATCAGGAAGATAAGAAAGATGTTCTCTGGATGAAGTTCTGGACTGAAACAAAAAGCTCCTGGTTTTTAACACATTCGCTCATGGACATTCTTTTCTCTTGTTTCCTCAGTTTCACCTAATCTATGGATTTCTCCTCTGAGGAAACCCAGATAGCAAAAGGAATTTTTCTCTGGGAACTGCAAAGTCGCTTGGTTCAGTGGAGGCACTCATGACCCGTGCCTCTTATGAAGAGGATAAAGAGGGGGCGTCCTGTGGTAAACTTCAGCAACACTCTTGCgcactaggggtgggacaaaatatcagtattgcgatatattgtattgttttgcaTTATATTATTGATACATGCCACCAAACATAGGTTCTGTAAACTTCTTTAGACTCCTCCCAAATTTGACTTACTGAAGTTGCTGCTTCATTACCTGCAgggaagaatattggttgtgaaattctgtgaaattGACACTAGTAAATGCGTAATTTTTGGCATTTTCTTATTTAAGAATATTCCATCTTCTTTtgtaacacacacagatgcCATGAATGATCTTAGTTAGAGATCTgttttgtgatatatattgaGTATTATATCAtatcgtgagatgccctgtgatttccACCCCTATTGCACAAGCAATCACGCCACTGCAGCTTAGTAACTGACCATGTCGGCCATCCGACGCAAATTTGGCGACGACTACCAGGTGGTCAACACCAAGACCGGGCATGGCTGCACGTTTCCAGCACCAGCCAAGAGGAAGCGGCAGCGCTTCGTGGAGAAGAACGGCCGCTGCAACGTCCAGCACGGCAACCTGGGCGGAGAGACCAGCCGCTACTTGTCTGATCTCTTCACCACGCTGGTGGACCTGAAGTGGCGCTGGAACTTGCTCATCTTCCTGCTCACCTACACGGTGGCCTGGCTGATCATGGCCTCCATGTGGTGGGTGATCGCCTACATCAGGGGTGACCTGGGACAAGGCCACGACGACTCGTACACACCCTGCGTCGCCAACGTCTACAACTTCCCCTCCGCCTTCCTCTTCTTCATCGAGACAGAGGCCACCATCGGCTACGGCTACCGCTACATCACCGAGAAGTGCCCAGAGGGCatcatcctcttcctctttcAGTCGCTGCTGGGCTCCATCGTAGACGCCTTCCTCATCGGATGCATGTTCATCAAGATGTCGCAGCCCAAGAAGCGAGCAGAGACACTCATGTTCAGCCAGGACGCGGTCATCTCCCAGCGAGACGGCAAGCTGTGCCTCATGTTCCGCGTGGGCAACCTGAGGAACAGCCACATGGTGTCGGCGCAGATCAGGTGCAAACTTATTAAGtCTCGTCAGACTCCTGAGGGCGAGTTTCTGCCTCTGGACCAGAGGGAGTTGGACGTGGGCTTCGGGACGGGCGCCGATCAGCTCTTCCTCGTCTCTCCTCTCACCATCTGCCATGAGATAAACCCCAAGAGCCCCTTCTTCGACCTCTCCCAGCGCTCCCTCATGAGTGAGCAGTTTGAGATCGTCGTGATTCTAGAGGGCATCGTAGAAACCACAGGTATGACCTGCCAGGCCCGTACATCCTACACTGAGGACGAGGTTCTGTGGGGTCACCGCTTTCTTCCTGTAATGTCTCTGGAGGAGGGCTTCTTCCGGGTTGACTACTCTCAGTTCCACAGCACCTTTGAGGTTAACACACCACCCTACAGCGTCAAGGAGCAAGAGGAGACGTCCTGCCTGCCCTCCCCAGCTCCCCCGCTCACCCCCACCCCAGGTGACCCCAGGAACAGCCGCAGGGAGCGCATCTTCTCCCTGGACGCCGCTCCGCAGGAGGAGCCTGTCTCCAGGCTGCCCAGCAAGCTCCAGCGCATGAGCTCCAGAAATGGCAAAGAGACCCTGAAAGCCAGCAGCGGTCCAGCAGCACAGCAGGCCAGCGAGAAAGCATCCAGCACGGGGGACCTGCCCCTGAGGATCCAGCGTGTGGGCTCCTTTGCCAGCCCAGAGGAACCGGGAGGAAACCAACAGCTTAATCTGAAGCCTCTGAAGATCAGTTCAGAGACCCACACCCAGTCAACGGGAGAACTAGAGCACCACAGACTGACTCCGCTGCCTCCACCCATTCCAGGGCCAAATCTCAACCCCCTGCCCGCAGTCGGCAGCCGGCCAGAGGACAATCTGCCCGCCAAACTCCGTCGGATGAACGCGGACCGCTGAGGCACGAGCCGAGGCACTGTTGACTTATAACCAATGGACTCAAGACTCAGACATACAAGCAAAACGCCTAGGAGGCCAGAGCTCGTAATTATAGCAAGATTTTAATATATACCTATACTGGACTATACTGTGATTCTTTTAAATCAGTGGTTCCTGGCTCTGGTTCTGGAGTATCTCTATATTTTTTGGTGCGATTAATAAGCATCAATACCGAAACATATTCTCTAAATACATTTTACGCAGGAAACAAATCACAGGATCTGAtttgaatacaaaaaaatattgtttttaaaacatgatacagcttgttttaatttgactttttaagactttgtttatgtaataaaaaataaaatacacaatcaAGAAAAACTACACAAAACTACCACAATTACAGaaagaaaactgtatttttaactaTGCATCCCAATAGATGGCTCTCCTTTATTTAGCACACCACTTAGCACAATGCTAGCCAGTGCGGGCATCTGCTAGCTGATGTAAAAGGGTTGGCATGTGATAAAGTTAGCATTCTCCTGGAAGCGTGAAGAAGAGATGGTGGGCTTTATATGGCTTTATATGTaagataggaggagtcctaacaAGTCGGGTAGATAATCAACCAAAAATATGATTTTGCACTAGTTCTGGCTTGGATTGTGCATTATTTGTGTCCCCTTGCCCACCGACATTTCTAACAGCATTTGCTTGCTGCAATGCTCAGCAGATTTGCATGAAATATAGTTGAGAATTTTAAGGATGCACTTTCTGTGCCTCTGAAAGCTACACTTGCTAAGTGCTATATTTTTGTTGAATTTAGGAAGTGTGCAGAAATGtctatttgaatatttaaagttatttcagCGCTAGCTGCTAGCATGTTTCAGCCCAGCTATTTAGTCAAACAAGATACCTACAATGGCACGGAGGAGCATGTCTTCACTGGCagttaatacaataaaacaatgcactttggctttagtttagtttagatttatttattttttaagataacTGTATAAGGCAGAAATATGTTCCTTACTATGCTCCTTGTCTGTGCTCTGCTTAAGATAATAGACTTTTTCTAACAGGCCATCTCTCCATATGCAGCATTTTAAACACAGTAAGCTAAGCATCGCCTAGTGattgtaaatatacagtataaactgtTGATTTAGTTTGCTTAGGAAAGCATGTTCTAGTCAGTTAATCAAATGTGGATGAGCAGTGTTAAAGATTTGTGCTTACCCAGCCAACATTATCATGTGCTGCTCATTATTATGGGCAGAACTTGGGCTAGGTGGGTTCTGGATGGGTATAGTGGGCTCTATTTGTTTTTGGTGGGACCCAGTTGGTCTTCCCAAATTGGCCCCATCATTACAGCTCTCCTTAATCCCACATGGGTCCCCAGACGGGGCCAATATTTAACCCTCATGTCACATCACTGACATTCACAGGAGGGGTCCACATGAAATCCATAAACAACAGTTTCTGTTTTGCATTCATGGTACCCGTGCAATTAAGATGAAAATTTAGAATGAGCCATAGAGTATTTTCCAACCATTATTAAGAAAACAGTTCTTCTCACCAACGTTTTCTTATTTGAGATTTCTTCAATTTGCAAGGTCAGTGGAATCCTTCATTATCAGTTCAGTAGTTCAAACACTGTTTATCAGATGTAGACATATTGTTAAGACTTTACCCAAGAACAAACGTAAGAATAATCTTagaaagatataataaaagaggcCCAGTGTCTTTAAAtacaattctttaaaaaatgtctaaTATTCTCTTAAGAATGTTTTAACTATTTACTTCATTGTTTTCTTACAtagcattttaattttaatttgttgttttacAGCTTATCATGAACAGCACAAAACATGCTTTCAAATTTTCCATTATTCAGGTAAATCCATGCAGTGGAGAGCAAAATGGAGGAAAACGATGTCTAGCTAAGCGATTTTAATTCGAAGTGAAATAGCCAACATGGAACATGGATGTTCTTGGAAAATTTGACATGTTATGGGTAAACGTTTGTTTTTGTTGATGTAGAAATGAAGAATATCAgcctttaatgtttaattagaCAAATTAAAATAGACATACATTTTTGTAATTCACTTtagcatattaaatatttaaactgtttttaggGGCAACCTGAATTCTTACAGTCTAAGATTTAAGTTATACATATTCATACATACGAGAATTCCTAAAGAATAGAGTTAAGAATATCTGTTCATCTTTACCTTCTTCTGTAGTATTAGGTCTAAgagaaaaacattttcaagacataatttattttcttttgtgaaTATAGCCCCGGTCTGTAACACTTTGTTTGATATTTATGATTGCCCACGTCAGGATATAACCTCTTATATAAATGCAATTTACTGCAGTtgaaattttctttaaaaaaaaaatacatatttagaaATTGGCATCTGCTGCTTACCTGCCaggttcttttttttagatatgtTTATGCACATCATGCTGAGTTCTAAATTTAGCTTTGAATTGCACCTACAATCGATTCTTATCATTGGAAATGGTCAGTTGCCTGTCACTGTGAAAACTGGGTTTTAATATATGCGTACTTTGCCCAGTATGACCCCTGCCCGGCACAATTTAGTGTTTTCCTCCCCTATCACACCCACTTCAACTCAATAAGGGCTTTCCCATTAGctgattagttggatcaggtgtgttggagCAGGATTAGAGGCTAACATATGCAGGACAGGGGGTCCTCCAGGACCAGGACTGGGAACcactgttttaaatgattacaCAAGGGAAACAGCCATGCCTCGCACTGCTTTATTTAAGATCAGAATGGATTTCGCACATCGGCACCAGActcaaaatgttttgttttttgtttaactaAGCGAAATGCACATCTTTAGTTGCTgtagttaaaatataatataatattcacatcTAGGCTATATATCACACTATActgtttgattatttatttatttatttattcaactcTTGCCTGTTGGAAATGAATCATGTTGTCTTTTCATTTTTGATAAACCTCTGCTTTTAAGACGTTATTTAGACATGGCATTTAGGAATACGCATTTCTTTAGGTATGAATTAAGGCTTTACCATGTGAAAAGATCCTGTCGTGTGTatctacagtatttttattttatttttaatttattttattttaagatcaCTAAGGCCGTTTTTACACCTAGAGTTAATAtgctctggtctgaatcagccAAACAAGTTTGGAAATTGGAgcattttggtttggtttgttttcacacagggaaaAATGCAAGTGCTCTCAATTAATTGGTTAAATCTGTCGGagaggagcaagaaagtaaaaatataaagaaatgttCTGTGTTCTGGACAATTTAACAGGAGCAACAACAGATATGgtatttgttcatagctgtagtgATTTTTGGCCATCACAAAAACTGAGAAATACTGTTAGATTACAGATCAAATGTAATTTAGttgtaaaaatattgaaatattcaCTTCCTCTAAACATAGATTAAATGTagattttttacaatttaaatacaaaatatataaaatcttgCTCAAACACAACAGGTTCTAACAGCACAACAgttcttttgctaaaaatggGGCTTCTAAAATAGAGGTGACTCAAACTGACACACCCCCAAAAGCTTAGTCTCAGCTCAGTGTCCAATGATATGTAGAACTTTTTCTAGATAACCTCACCTCTCTTAAAACATTACAGAAAACAAAATGCCTATTTTATCAAAActgcaaactgcaaacaaaaccCACAGCTTCATGTGAAAACTGCATTACTTTAAAGGTATAAAATGTAACAGGACATCTCTGTTTTTTGACAGACAGAAAATATCttttaaaacagtaactttTAGCAGCTTgcatattttttgcagtttgtTGTTTTTGACAGTGATTTATTctcaaaaaacatattttacagaattcttaatttaataattaataattttaagttattttaaataactattttaagGTTACTTTCCTTAAAATGGGCCTATAAAACAGTGTTACAAAAACAGACAacaaatttattattttacttatacACAGTGTTTTGGTAAAATCACGACACGTTACAAAAATGGCCTAAAATTGACATTTTAAGGTGAGAATTTTATTCAGGAAAATGTTGGaaaatttactgaaaaaaaggctgTAAAACTACCCacctttttgttgttgttgttgttgttttttacagtgtggctATGGGAGCCATTTAGCTGATGGTTGGATTGAATCGAGGTCAGATCATGTTCCTACACTAAATGCTCCAGGGTTCATTAGGGACCGGATTGAGACTTCCTCCTCTCTAGGTACTCTCtagtgtgtgattttttttgtctacttctgagtgtgattactgtattcactcgtgtgaaaataaaccagagtCTAATTTAACTGGGAGAAaaagtgcaggtgtgaaaacggcCTTGGACTGTGATTCTGAGCAGAATTAAGGGTTAAtctgatgaaatgatgaaatgaagaaatgtaCGAACACATGGACCTGGGAATGCTTCTCCTTGGCGTCTTGGCAATACTATAGAACTGAACTGTGGGAAGCAGGATGTTGGCACAATGTAAACTGAATATATGCATATGCTTTGACATGGAGATCATTTGAATAATATTTTCATCTATTTAAAGGTtctatttaataaatgatttgggaagtgct

Function

NR:

description
PREDICTED: G protein-activated inward rectifier potassium channel 1-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015467 G-protein activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05330 KCNJN; potassium inwardly-rectifying channel subfamily J, other

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007234066.3 True 7328 mRNA 0.41 4 457171 483231

Neighbor

gene id symbol gene type direction distance location
htr7 htr7,LOC107758424,LOC107669182,LOC107594208,LOC107584235,LOC107753458,LOC107683721 coding upstream 409608 42719 ~ 47563 (+)
acbd4 LOC107662569 coding downstream 252597 735828 ~ 745143 (+)
LOC103047415 LOC103469343 coding downstream 269357 752588 ~ 754996 (+)
LOC103022594 LOC108424886 coding downstream 355074 838305 ~ 850262 (+)
trnac-gca_9 NA coding downstream 398136 881367 ~ 881438 (+)
LOC103026642 LOC108424836 coding downstream 487405 970636 ~ 973482 (+)
G33246 NA non-coding upstream 55859 396111 ~ 401312 (+)
G33235 NA non-coding upstream 84395 369665 ~ 372776 (+)
G33231 NA non-coding upstream 94711 361427 ~ 362460 (+)
G33206 NA non-coding upstream 133118 288032 ~ 324053 (+)
G33211 NA non-coding upstream 150853 270650 ~ 306318 (+)
G33256 NA non-coding downstream 1862 485093 ~ 485304 (+)
G33312 si:dkeyp-94b4.1,LOC108424890,LOC107758427,LOC107675649 non-coding downstream 17246 500477 ~ 576299 (+)
LOC111192340 NA non-coding downstream 17252 500483 ~ 504588 (+)
LOC103046496 NA non-coding downstream 76330 559561 ~ 576144 (+)
G33320 NA non-coding downstream 83705 566936 ~ 568894 (+)
LOC111192417 NA other upstream 32700 419010 ~ 424471 (+)
hectd2 hectd2,LOC107584154,LOC107594154,LOC107758436,LOC107753452 other upstream 225254 181069 ~ 231917 (+)
LOC103039306 pcgf5,LOC108410714,LOC106589380 other upstream 290781 128356 ~ 166390 (+)
rpp30 rpp30 other upstream 356120 96303 ~ 101051 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other downstream 499936 983167 ~ 985381 (+)
trnal-aag NA other downstream 509081 992312 ~ 992518 (+)
LOC111192342 dnah9 other downstream 885942 1369173 ~ 1388019 (+)
amz2 amz2 other downstream 1567511 2050742 ~ 2056963 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 3080799 3564030 ~ 3659132 (+)

Expression


Co-expression Network