acbd4 (LOC107662569)


Basic Information

Item Value
gene id acbd4
gene name LOC107662569
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 735828 ~ 745143 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007234074.3
TCTCAGATTAGCTGCAGTAGTTTGCAGGAGGCAGGCAGATGTAAACAGTCCTGACTCTCTCCCggtgtctctctcactctctctctctttttgatgAGCGAAGCTGCGatttctgtgtctctgtctgtctggttgTTCTGTCACTCTGACGGTTTGTTCAGCTTTTTGTCATGGGCTCTTGTTCGTCTTAGTCGTTTTCTGGACTGTCAGAGAGAAGAAGGACAACAAGTGAGGAGCTCTCCACCGTCTGTTATGGAGACCATGGAGCCACACAGCACCACATCTCAGATGCAGGCTGAAGAGTGTCAGCGACGCTTTCAGGCAGCTGTGGATGTCATTCAAAACCTGCCCAAAAATGGTTCCTATAGACCTTCCTATGAAGTGATGCTGCGCTTCTATGGTCTGTACAAACAGGCCATGTGTGGCCCATGCAGTGTGTCCCGGCCTGGTTTCTGGGACCCTGTTGGTCGCTACAAATGGGATGCCTGGAGCCAGCTTGGAGACATGAGTCGTGAGAATGCCATGTCTGCCTATGTTGATGAGATGAAAAAAGTTGCACAGGAGgttatAGACAATATGCCCATAAATGAGAAGACGGCCTCCTTTTACCACTACTTTGAGCCACTGTACCATGTCATTCATGATATGCCTAGACCTCCTGAGGCATTGCTAAGTCTAAGACCAGATATAAATGCTAATGAAGCAAGCCCTGATCCAGCCAAGGTGGTGGATGATGCTTTGCAAGAGGAAACATCCCAAAAGGAGGTGCAAGAGCATGAACTGGAACTTGTCTATAACAGTGACCCTCACTGTGAAAgcccagGTCTGGCTCCTTCAGAGGTTCCCGTGTTAACTAGTGACTCAGAAAGTGAAATCTTCTGTGATTCAGTGGAGCAGCTGGACAGCGTTAGGCCTGCTGCTGGGCTCATGGGGCCCTCTGGTGTCCGTGGACAGGACTACACACCCATCTCTCAGGTGACCCAGGTGGGTGCCGGGCAGGGTGGAGAGGGGTCTGGGAATGGGCATGACCCATCAATAAGGAGGAGAGACCCAGGAAGAGAGGGAATGAGGCAAGGATGGAGAGAGCCTCCTGGGGGTTTTTCTTATGGCAGTGGCAGGCGAGCGGGCCGGCCGCCCTCAGGcccgggaggaggaggaggaggagggggagacGATACTGATGGAGGTGCTGATAGACTTCAGGACGTTCAGGTGCAGCAGCAGATCGTGCTGGCTCTGCGCAGACTCAGAGAGGACATGCAGAGCGTGATGGAGAGGCTGGAGGTGGTTGAGGGACTGGCTGCAGCTATTGCCCAGAATTCACAGTGGAGATCTCATATGCAGTTAACAGCTCAAAAAACTGAGGTGGAGAAATGGTGGCCATTTGATGTCTCTGGCCGAACGCTGCTTCTCTTGTTGGTCTGGCCTTTCATTGCCCAGGGAATGGTTTTCTTGCTCAGACGGAGGAAGAAAAAGCCTCACATATGTTCACTATGAATCAGCCTTGAACAAAGAAGACTGCATCCTTGATCCTGAATGATCAATATAGTGTTTTTAATTGTGAGCTAAAGGTAATGGGGAAAGTGCTGCAATAGAGTTCTAATCTTGCATGAGTCTGATATGAGGAAAGCTAATATAAATGtgaataagtatttttttttttatatgtatttacttGCAGAAAGAAAAGGATGGTTAATATTGGAATATTTCCGGTTCATTTCAGAATTGTATGACTGTCATGTTTAAAAAAGGTAGCATATACAAATCTGTGAATCAACAATCAAAACCACATTCAATTACAGATGATATTAGTATCATCAGGAATGTTGGTATTAGTTTGTTGAATTTTTCTGTACAACAGCCCTGGTAAcagatttttataaaattgttggGCTTAAATTTCTGGGAGAATGTGAATGTAACCTGAATGATTGAGAGCTTCTAATGAAGGCCTTAAATGAATGCTTCACATCTGTCCTCTGATGTTGATTATTACCAGAtgttaaataagttaaaataagttatttgtACTATTTAGAGGGGTCCGGTTTAATTGGGGAGGTggcacaatgttttttttttttttttttttttttagtcccaTCTTCCCATCATTTTTTTATAGGATTCTGACATGCAGGAAAACAACTTTTTAAGTATGCAGACACTAGAAAGAACATTTGCTTGTAACAGTTGTTAACAATATGATTCAAATGGATTTTTCCCTGAATAAGCACTTCAGACAAATGCCTTCTGCTGACTATGGTCTGGATAAACATTTCGATTATTGTGCACTATTTCCAAAAAACAGTTATCTAAagaaactactactacttttgAGTTTACCACAACTTGTTTGACAATCATTTACCAATGCTTTACTGTGTTTATGACTGATTTAATTAGACACAAATAGATAGAAATGCTAATAAATCATATaatactgctg
>XM_007234075.3
AGGCAGATGTAAACAGTCCTGACTCTCTCCCggtgtctctctcactctctctctctttttgatgAGCGAAGCTGCGatttctgtgtctctgtctgtctggttgTTCTGTCACTCTGACGGTTTGTTCAGCTTTTTGTCATGGGCTCTTGTTCGTCTTAGTCGTTTTCTGGACTGTCAGAGAGAAGAAGGACAACAAGTGAGGAGATTGACTAACTGTCTTTGCCAATGCTGTCTACCTACCCAGGAAAAGTTAACATTATGGCAGAATGACTGTTTTCGACAGCACATCTAAGCTATCTCCAAGTTTAGCTCACcttattactttaaaatgagCATTGGGCTTTACAGCTCTCCACCGTCTGTTATGGAGACCATGGAGCCACACAGCACCACATCTCAGATGCAGGCTGAAGAGTGTCAGCGACGCTTTCAGGCAGCTGTGGATGTCATTCAAAACCTGCCCAAAAATGGTTCCTATAGACCTTCCTATGAAGTGATGCTGCGCTTCTATGGTCTGTACAAACAGGCCATGTGTGGCCCATGCAGTGTGTCCCGGCCTGGTTTCTGGGACCCTGTTGGTCGCTACAAATGGGATGCCTGGAGCCAGCTTGGAGACATGAGTCGTGAGAATGCCATGTCTGCCTATGTTGATGAGATGAAAAAAGTTGCACAGGAGgttatAGACAATATGCCCATAAATGAGAAGACGGCCTCCTTTTACCACTACTTTGAGCCACTGTACCATGTCATTCATGATATGCCTAGACCTCCTGAGGCATTGCTAAGTCTAAGACCAGATATAAATGCTAATGAAGCAAGCCCTGATCCAGCCAAGGTGGTGGATGATGCTTTGCAAGAGGAAACATCCCAAAAGGAGGTGCAAGAGCATGAACTGGAACTTGTCTATAACAGTGACCCTCACTGTGAAAgcccagGTCTGGCTCCTTCAGAGGTTCCCGTGTTAACTAGTGACTCAGAAAGTGAAATCTTCTGTGATTCAGTGGAGCAGCTGGACAGCGTTAGGCCTGCTGCTGGGCTCATGGGGCCCTCTGGTGTCCGTGGACAGGACTACACACCCATCTCTCAGGTGACCCAGGTGGGTGCCGGGCAGGGTGGAGAGGGGTCTGGGAATGGGCATGACCCATCAATAAGGAGGAGAGACCCAGGAAGAGAGGGAATGAGGCAAGGATGGAGAGAGCCTCCTGGGGGTTTTTCTTATGGCAGTGGCAGGCGAGCGGGCCGGCCGCCCTCAGGcccgggaggaggaggaggaggagggggagacGATACTGATGGAGGTGCTGATAGACTTCAGGACGTTCAGGTGCAGCAGCAGATCGTGCTGGCTCTGCGCAGACTCAGAGAGGACATGCAGAGCGTGATGGAGAGGCTGGAGGTGGTTGAGGGACTGGCTGCAGCTATTGCCCAGAATTCACAGTGGAGATCTCATATGCAGTTAACAGCTCAAAAAACTGAGGTGGAGAAATGGTGGCCATTTGATGTCTCTGGCCGAACGCTGCTTCTCTTGTTGGTCTGGCCTTTCATTGCCCAGGGAATGGTTTTCTTGCTCAGACGGAGGAAGAAAAAGCCTCACATATGTTCACTATGAATCAGCCTTGAACAAAGAAGACTGCATCCTTGATCCTGAATGATCAATATAGTGTTTTTAATTGTGAGCTAAAGGTAATGGGGAAAGTGCTGCAATAGAGTTCTAATCTTGCATGAGTCTGATATGAGGAAAGCTAATATAAATGtgaataagtatttttttttttatatgtatttacttGCAGAAAGAAAAGGATGGTTAATATTGGAATATTTCCGGTTCATTTCAGAATTGTATGACTGTCATGTTTAAAAAAGGTAGCATATACAAATCTGTGAATCAACAATCAAAACCACATTCAATTACAGATGATATTAGTATCATCAGGAATGTTGGTATTAGTTTGTTGAATTTTTCTGTACAACAGCCCTGGTAAcagatttttataaaattgttggGCTTAAATTTCTGGGAGAATGTGAATGTAACCTGAATGATTGAGAGCTTCTAATGAAGGCCTTAAATGAATGCTTCACATCTGTCCTCTGATGTTGATTATTACCAGAtgttaaataagttaaaataagttatttgtACTATTTAGAGGGGTCCGGTTTAATTGGGGAGGTggcacaatgttttttttttttttttttttttttagtcccaTCTTCCCATCATTTTTTTATAGGATTCTGACATGCAGGAAAACAACTTTTTAAGTATGCAGACACTAGAAAGAACATTTGCTTGTAACAGTTGTTAACAATATGATTCAAATGGATTTTTCCCTGAATAAGCACTTCAGACAAATGCCTTCTGCTGACTATGGTCTGGATAAACATTTCGATTATTGTGCACTATTTCCAAAAAACAGTTATCTAAagaaactactactacttttgAGTTTACCACAACTTGTTTGACAATCATTTACCAATGCTTTACTGTGTTTATGACTGATTTAATTAGACACAAATAGATAGAAATGCTAATAAATCATATaatactgctg
>XM_007234076.3
GACTCTCTCCCggtgtctctctcactctctctctctttttgatgAGCGAAGCTGCGatttctgtgtctctgtctgtctggttgTTCTGTCACTCTGACGGTTTGTTCAGCTTTTTGTCATGGGCTCTTGTTCGTCTTAGTCGTTTTCTGGACTGTCAGAGAGAAGAAGGACAACAAGTGAGGAGGAAAAGTTAACATTATGGCAGAATGACTGTTTTCGACAGCACATCTAAGCTATCTCCAAGTTTAGCTCACcttattactttaaaatgagCATTGGGCTTTACAGCTCTCCACCGTCTGTTATGGAGACCATGGAGCCACACAGCACCACATCTCAGATGCAGGCTGAAGAGTGTCAGCGACGCTTTCAGGCAGCTGTGGATGTCATTCAAAACCTGCCCAAAAATGGTTCCTATAGACCTTCCTATGAAGTGATGCTGCGCTTCTATGGTCTGTACAAACAGGCCATGTGTGGCCCATGCAGTGTGTCCCGGCCTGGTTTCTGGGACCCTGTTGGTCGCTACAAATGGGATGCCTGGAGCCAGCTTGGAGACATGAGTCGTGAGAATGCCATGTCTGCCTATGTTGATGAGATGAAAAAAGTTGCACAGGAGgttatAGACAATATGCCCATAAATGAGAAGACGGCCTCCTTTTACCACTACTTTGAGCCACTGTACCATGTCATTCATGATATGCCTAGACCTCCTGAGGCATTGCTAAGTCTAAGACCAGATATAAATGCTAATGAAGCAAGCCCTGATCCAGCCAAGGTGGTGGATGATGCTTTGCAAGAGGAAACATCCCAAAAGGAGGTGCAAGAGCATGAACTGGAACTTGTCTATAACAGTGACCCTCACTGTGAAAgcccagGTCTGGCTCCTTCAGAGGTTCCCGTGTTAACTAGTGACTCAGAAAGTGAAATCTTCTGTGATTCAGTGGAGCAGCTGGACAGCGTTAGGCCTGCTGCTGGGCTCATGGGGCCCTCTGGTGTCCGTGGACAGGACTACACACCCATCTCTCAGGTGACCCAGGTGGGTGCCGGGCAGGGTGGAGAGGGGTCTGGGAATGGGCATGACCCATCAATAAGGAGGAGAGACCCAGGAAGAGAGGGAATGAGGCAAGGATGGAGAGAGCCTCCTGGGGGTTTTTCTTATGGCAGTGGCAGGCGAGCGGGCCGGCCGCCCTCAGGcccgggaggaggaggaggaggagggggagacGATACTGATGGAGGTGCTGATAGACTTCAGGACGTTCAGGTGCAGCAGCAGATCGTGCTGGCTCTGCGCAGACTCAGAGAGGACATGCAGAGCGTGATGGAGAGGCTGGAGGTGGTTGAGGGACTGGCTGCAGCTATTGCCCAGAATTCACAGTGGAGATCTCATATGCAGTTAACAGCTCAAAAAACTGAGGTGGAGAAATGGTGGCCATTTGATGTCTCTGGCCGAACGCTGCTTCTCTTGTTGGTCTGGCCTTTCATTGCCCAGGGAATGGTTTTCTTGCTCAGACGGAGGAAGAAAAAGCCTCACATATGTTCACTATGAATCAGCCTTGAACAAAGAAGACTGCATCCTTGATCCTGAATGATCAATATAGTGTTTTTAATTGTGAGCTAAAGGTAATGGGGAAAGTGCTGCAATAGAGTTCTAATCTTGCATGAGTCTGATATGAGGAAAGCTAATATAAATGtgaataagtatttttttttttatatgtatttacttGCAGAAAGAAAAGGATGGTTAATATTGGAATATTTCCGGTTCATTTCAGAATTGTATGACTGTCATGTTTAAAAAAGGTAGCATATACAAATCTGTGAATCAACAATCAAAACCACATTCAATTACAGATGATATTAGTATCATCAGGAATGTTGGTATTAGTTTGTTGAATTTTTCTGTACAACAGCCCTGGTAAcagatttttataaaattgttggGCTTAAATTTCTGGGAGAATGTGAATGTAACCTGAATGATTGAGAGCTTCTAATGAAGGCCTTAAATGAATGCTTCACATCTGTCCTCTGATGTTGATTATTACCAGAtgttaaataagttaaaataagttatttgtACTATTTAGAGGGGTCCGGTTTAATTGGGGAGGTggcacaatgttttttttttttttttttttttttagtcccaTCTTCCCATCATTTTTTTATAGGATTCTGACATGCAGGAAAACAACTTTTTAAGTATGCAGACACTAGAAAGAACATTTGCTTGTAACAGTTGTTAACAATATGATTCAAATGGATTTTTCCCTGAATAAGCACTTCAGACAAATGCCTTCTGCTGACTATGGTCTGGATAAACATTTCGATTATTGTGCACTATTTCCAAAAAACAGTTATCTAAagaaactactactacttttgAGTTTACCACAACTTGTTTGACAATCATTTACCAATGCTTTACTGTGTTTATGACTGATTTAATTAGACACAAATAGATAGAAATGCTAATAAATCATATaatactgctg

Function

NR:

description
acyl-CoA-binding domain-containing protein 5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007234074.3 False 2452 mRNA 0.44 11 735828 745143
XM_007234075.3 True 2564 mRNA 0.44 11 735860 745143
XM_007234076.3 False 2504 mRNA 0.44 11 735880 745143

Neighbor

gene id symbol gene type direction distance location
LOC103045384 si:dkey-100n10.2,LOC108424892,LOC107758432,LOC107584158,LOC107661094,LOC108273498,LOC107727700 coding upstream 252597 457171 ~ 483231 (+)
htr7 htr7,LOC107758424,LOC107669182,LOC107594208,LOC107584235,LOC107753458,LOC107683721 coding upstream 688265 42719 ~ 47563 (+)
LOC103047415 LOC103469343 coding downstream 7445 752588 ~ 754996 (+)
LOC103022594 LOC108424886 coding downstream 93162 838305 ~ 850262 (+)
trnac-gca_9 NA coding downstream 136224 881367 ~ 881438 (+)
LOC103026642 LOC108424836 coding downstream 225493 970636 ~ 973482 (+)
LOC103037439 LOC108424843 coding downstream 369445 1114588 ~ 1120630 (+)
G33329 NA non-coding upstream 123717 606044 ~ 612111 (+)
G33312 si:dkeyp-94b4.1,LOC108424890,LOC107758427,LOC107675649 non-coding upstream 159529 500477 ~ 576299 (+)
LOC103046496 NA non-coding upstream 159684 559561 ~ 576144 (+)
G33320 NA non-coding upstream 166934 566936 ~ 568894 (+)
LOC111192340 NA non-coding upstream 231240 500483 ~ 504588 (+)
G33413 lasp1,LOC108424884,LOC108274031,LOC105905439,LOC108258608,LOC107567378,LOC107745925 non-coding downstream 113505 858648 ~ 944469 (+)
G33426 NA non-coding downstream 167245 912388 ~ 921558 (+)
G33454 NA non-coding downstream 243777 988920 ~ 991094 (+)
LOC111192341 NA non-coding downstream 293899 1039042 ~ 1046503 (+)
LOC111192399 NA non-coding downstream 439922 1185065 ~ 1221130 (+)
LOC111192417 NA other upstream 311357 419010 ~ 424471 (+)
hectd2 hectd2,LOC107584154,LOC107594154,LOC107758436,LOC107753452 other upstream 503911 181069 ~ 231917 (+)
LOC103039306 pcgf5,LOC108410714,LOC106589380 other upstream 569438 128356 ~ 166390 (+)
rpp30 rpp30 other upstream 634777 96303 ~ 101051 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other downstream 238024 983167 ~ 985381 (+)
trnal-aag NA other downstream 247169 992312 ~ 992518 (+)
LOC111192342 dnah9 other downstream 624030 1369173 ~ 1388019 (+)
amz2 amz2 other downstream 1305599 2050742 ~ 2056963 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 2818887 3564030 ~ 3659132 (+)

Expression


Co-expression Network