LOC103035992


Basic Information

Item Value
gene id LOC103035992
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 24730900 ~ 24744132 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235893.2
ACACAAAGCCTCGCGGGGTCGTGGTTACTGAGCAACGGCGGCTGTTGGGCTGAGGGAAAGCGTTTCAgctgagaaaacagaaaaacagttaaaagataaaaacagaaatttCACCTGGATATGACTTTAGAGTTGTCCAACAGCTTGCCAGTTGATTGTCCAGACTCAGAGAGTGATGATGACAGCGAACCTGCAAGCGATCCTAAACCAGAACCCAACGAAGCTCCTAACACACAGAGTGACGTCTCAGACCAGGACCCGACACCGTTCCCAGAGAAGAAAGAGGAGAATGGTGAACCCACTCAGCCCAAGACAGACGGAGATTTACACATACAATCAGTCATAGAGTGTGACTGTGTAGCCATGACCTGTCAGTTCAGTACCGATGGGTCGCTGCTTGCTGTTGGGCTCTGCAATGGAACCATCAAAGTGTACAGCACAGACAGTGGTGAACTGACCCAGACCCTGAGGGACAACAGCAGTGTTATTTCAGGTCTACCAGTGACTGGCCTGCGCTTTACCTGCAGCGGGAACTTACACCACCTGCTACTGGCCACCTATGCCAGTGGCTGTGTGAGGTGTTGGTATGTGTGGGgagggcagtgtgtgtggtggctgAAAGAATCTAAGGACAGTGAAGAGGATGAGGACCCCCAGCCCAGAGAATCTCTGTGCCTGTCCACCTCCTTGTCTGGAGAGCGAGCAGTGACCGGCGGCTCAGATGCGACCGTTCACCTGTATGACCTCAACACCTGCCAGAGACTACAAGTCTGCAGAGCCAGTGCCTCGAAAGCAGTTATGGACGGACACCGGTTTCGAATCTTCGCTGTTAGTTtccatccagagagagagactgagttcATAACAGGGGGATGGGACAACACTGTTCAGttcTGGGACACCAGAATGCAACACTCTATCAGAATGTTGTACGGTCCTCATGTGTGTGGTGATGCCCTTCACATCAACCCAGCCTCCAATCAGATTCTCTCTGGGTCCTGGAGGAGGTACAACACCCTGGAGGTCTGGGACTATGATTCTGGGAGGAAAGTGTCTGAGGTTCCCCAGGACCCACATGAAAACAGCAGAATCTACACCTGCTACTGGTCTGGGCAGGACCACTTGATTGGTGGCGGGGGACAAGCAAACATACTGAGGGTCGTTAATCACCACAGTCTAGAGACGGAATCAAGACTGTTCGACTTATCATCTGCCGTCTACAGTTCTTCAGTGTGTCTATCTGGACAGTGGGCAGGTCTCATTGCAGCCAGCTCTGGGAAGCAAGTGTTTTTACTGCACAGAAATCAGAACACGAAAAAGCACCAGTGATTCTCTGCAGAGTGCCTGTGATACCCAAACACAGACACATTGTTAGTCTTCgctgttattttacattatttgaccTGTTATTTTtgagaaagaaaataagttcaaaaCAGGGTATGGTTCAACACTGTTCAGGTGAAAGAGCTCTAAATTCTTTTCATCTCTTACAAACATATCAACACCCATGCAAAAATCTTTgcagaagaaaaacattttttaacctTCAATAAAAgtctgttataaaaaaaa

Function

GO: NA

KEGG:

id description
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235893.2 True 1575 mRNA 0.48 11 24730900 24744132

Neighbor

gene id symbol gene type direction distance location
mto1 mto1 coding upstream 17087 24697136 ~ 24713813 (+)
LOC103037544 adprh,LOC108274007,LOC108411014,LOC105894051,LOC106579059 coding upstream 67320 24652629 ~ 24663580 (+)
LOC111192396 LOC108411010 coding upstream 82290 24631703 ~ 24648610 (+)
LOC111192424 NA coding upstream 328241 24401118 ~ 24402659 (+)
phyhipl phyhipl,phyhiplb,LOC107727060,LOC107746456,LOC107654056,LOC107695536 coding upstream 1045342 23628687 ~ 23685558 (+)
LOC103035168 sult1st6,LOC108274358,LOC108411008,LOC108274122,LOC108411004 coding downstream 6919 24751051 ~ 24765736 (+)
LOC103035674 LOC108411004 coding downstream 29599 24773731 ~ 24786710 (+)
pelo pelo,LOC107653258 coding downstream 104004 24848136 ~ 24865954 (+)
pkmyt1 pkmyt1 coding downstream 251354 24995486 ~ 25008027 (+)
LOC103031867 NA coding downstream 272204 25016336 ~ 25020657 (+)
G38833 NA non-coding upstream 215909 24458281 ~ 24514991 (+)
G38851 NA non-coding upstream 220676 24504831 ~ 24510224 (+)
G38837 LOC108443171 non-coding upstream 255472 24466389 ~ 24475428 (+)
G38822 NA non-coding upstream 286494 24443634 ~ 24444406 (+)
G38832 NA non-coding upstream 304175 24426446 ~ 24426725 (+)
G38903 NA non-coding downstream 8623 24752755 ~ 24756580 (+)
G38907 NA non-coding downstream 25027 24769159 ~ 24813837 (+)
G38910 atp2a1,LOC108411009,LOC107716472,LOC107551849,LOC108247894,LOC108274121,LOC105891595,LOC107653256 non-coding downstream 43613 24787745 ~ 24795792 (+)
G38909 NA non-coding downstream 61926 24806058 ~ 24807357 (+)
G38905 LOC108413689,LOC108274218,LOC101064018,LOC103392690 non-coding downstream 91420 24835552 ~ 24839365 (+)
G38870 NA other upstream 113448 24616784 ~ 24617452 (+)
G38817 NA other upstream 756380 23974161 ~ 23974520 (+)
trnar-ccu_27 NA other upstream 980707 23750121 ~ 23750193 (+)
trnar-ccu_26 NA other upstream 980809 23750019 ~ 23750091 (+)
trnar-ccu_25 NA other upstream 980911 23749917 ~ 23749989 (+)
G39179 NA other downstream 630827 25374959 ~ 25375344 (+)

Expression


Co-expression Network