tmem101 (tmem101,LOC107708986,LOC107693682)


Basic Information

Item Value
gene id tmem101
gene name tmem101,LOC107708986,LOC107693682
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17483919 ~ 17491064 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239751.3
tctctctctctccccccggACTCCGGCAGGTTCCGCCCGCAGTGAAGATGGCTGCTCCCAGCAGGCGGGAGGCTCTGCGGCTGCTGTCTCAGCTCGGAGCCTTCATTCTGACCCGGTTCGGGTTCTGGAACTGCTTCAGTATGCTGATGCTCTTCGCTGAGCGGGCTGACGTGAAGAGaaagcCGGATATTCAGGTGCCATACTTGTACGTTGACATGGGAGCAGCGGTGCTGTGTGCCAGTTTTATGTCGTTTGGAGTGAAGAGAAGGTGGTTCGCTCTGTTTTCAGCCATCCAGCTGGCGTTCAGCACATACCTGTCCTACGTTGGTGGACAAGTCCATTATGGGGACTGGTTAAAGGTCAGAATGTACTCCAGGGCCATGGCTGTCATTGGAGGATTTCTGGTGCTGGCCAGTGGGGCGGGGGAGGTGTACCGGCAGAAACCTCGCACTCGCTCTCTGCAGTCCACGGGACAGGTCTTCTTGGGAATCTACTTAATCTGTCTGgTGTACTCCCTCCAGCACAGCCAAGAGGACAGATTGGCGTACCTGGACCACATCCCTGGAGGAGAGGTCACCGTCCAGCTGCTGGTGGTGGTCTTTGGTGTGCTGGCTCTGTCCTACCTCTCCGGCTGCTACGTGCAGCTTTCCTCTCAGATCCTCTCCGTCCTCCTGCCGCTGGTCATCCTCTTTATAGACGGAAACATCGGGTACTGGCACCGCTCCCGCCGCGTGGAGTTCTGGAACCAGATGAAACTGATCGGGCACAACGTGGGCATTTTCGGGGCGGTGCTTATCTTAGCTACGGATGGTTGAGGAGCCGAACAGAGGAGGCTTACTTTGTACAAACAGATGGATGATGCTGAGCCCAAGGTTAAAGGAATAGTTAattgaaaaatctgaaatacaTGGTTTTccctattttttttcccaaatctTGATTAGACAGGTTTGATGTCTAaagtttgtgttttagtttcacacagtttttagtagtctgtctgtctgttctatTACTGTTGCGTCTTTAACACAAAACAGAAGCGACAGATTTCAGGCACCAATTTAACACTTCTTTAATgctcatgattaaaaaaaaaaggtttttagagGTTGTCTAAGGTGCAGACAGGAGACTAAATAGTGccataaggatttttttttctggtgtcgGATCTTAAAGAGCAAAGTGCAAGTTTGTGGTAGACCAAGGGTCCAGAAGacaaaacagtgaataaataagtTTGATAGGGTCTGAGGTTTTAAACCAACACATCTCAAAACACTTTTATGTACTTTACTAGAAAATTAGAATCCAATAAGCTATACAAAAATTGATTCAGAATGTTTTTTGTCAGGAgtgcatttttacattattaaaaactgaACAATTCTCCCGTTTACGTGATTTTAACAGCACATTTGAATATGTGCATCACATTAAATACTGTAACAACATAAGGATTTAATGTTtcctctaaataaaaaaaaaaataaaaaaaaaaatcaaattattgGAATATATAAAGTTTTACAAATCTCAGTTTAGGCCATCTAATCATACTGCATTTCTCAGGAGTGTTTCAGTACTAAGCGTTTTTTTGAGTAAGGGTGTTTTTTAAAACCACCcctatttggtccagttaaaaaCCACTCTGGTTCATTTGCATCAttgatgctgtgtgtgtgggcaggTGTGAAACCCGTAATTGCAATGGGTAATGACCAAACCACCTGTGGGAGAAGGTGGTCTAGTTCTGGTTCCAAACAAACTCCACTATTAAATAAACTCctcatgtttgagctaaactgctgtacaggtgcagtttaatctgatttattgcCCAGATAATTACAACAGCTATTAACAatcactgtctctgctgctccatacTAAGCTGTTTTCCCACTGAggtaaagcagctttacactgtttactttctttctccccATTCTGACCAATAAGGGACTCATTATAGAATTATAAACCTGCCTTAAGTCTTAATACAGAGCAGCCAATCAAAATGCAGCTCATTGTCAGTCTTAAAAAGACAGTAGCAGAAACAGTGTGTCCATTTCTAGTGGATAAAAACAGGTTGGAAATTAGCCACGTAAATATAATTGATGTTTTGATATTTTAAGTGGAATCTGTGTAAATGAGATGTTTCAATGAACCATTCCTTTAAGACATGCAGGAAGTGCTGTCTGTATCTCAGGGGTTGGCTCAGAATGACCATAGAAATAATACACCTTAATGTTCACACACTGACAGGTACAGTATTTAATAGCCTAGATAATTAAgtttaacctctctctctcttttctttcccaGTCGTCTTATTTCATcactttttataataaaatacgcAGATAGAGAATGGTTTCAAAGTCAGCATCTACATGACTTCATAtatgctgtttttatcaaagttattgtttacattctgttaaagcttctttttttatttaaaacaaaagacAGTTTTACAATGTCTTAAGAGTAGATTACCAtgttaaaggtgagtgaggAGTTAATGGCTGTTTGCTGTCTGAATGCTGTATATTGAGGTATAAAGGGAATAATGTGGTTGAGAAAATGCTCTGTCACTCATAGCACTACAATCTTTTGCATTCTTTATTACTGGCATCAGATGTCATTTTGTTGTCTATTAAATtggtctgtttttatatttaa
>XM_015603207.2
CAGTAGAAGCCCCgggcgccctctctctctctccccccggACTCCGGCAGGTTCCGCCCGCAGTGAAGATGGCTGCTCCCAGCAGGCGGGAGGCTCTGCGGCTGCTGTCTCAGCTCGGAGCCTTCATTCTGACCCGGTTCGGGTTCTGGAACTGCTTCAGTATGCTGATGCTCTTCGCTGAGCGGGCTGACGTGAAGAGaaagcCGGATATTCAGGTGCCATACTTGTACGTTGACATGGGAGCAGCGGTGCTGTGTGCCAGTTTTATGTCGTTTGGAGTGAAGAGAAGGTGGTTCGCTCTGTTTTCAGCCATCCAGCTGGCGTTCAGCACATACCTGTCCTACGTTGGTGGACAAGTCCATTATGGGGACTGGTTAAAGGTCAGAATGTACTCCAGGGCCATGGCTGTCATTGGAGGATTTCTGGTGCTGGCCAGTGGGGCGGGGGAGGTGTACCGGCAGAAACCTCGCACTCGCTCTCTGCAGTCCACGGGACAGgTGTACTCCCTCCAGCACAGCCAAGAGGACAGATTGGCGTACCTGGACCACATCCCTGGAGGAGAGGTCACCGTCCAGCTGCTGGTGGTGGTCTTTGGTGTGCTGGCTCTGTCCTACCTCTCCGGCTGCTACGTGCAGCTTTCCTCTCAGATCCTCTCCGTCCTCCTGCCGCTGGTCATCCTCTTTATAGACGGAAACATCGGGTACTGGCACCGCTCCCGCCGCGTGGAGTTCTGGAACCAGATGAAACTGATCGGGCACAACGTGGGCATTTTCGGGGCGGTGCTTATCTTAGCTACGGATGGTTGAGGAGCCGAACAGAGGAGGCTTACTTTGTACAAACAGATGGATGATGCTGAGCCCAAGGTTAAAGGAATAGTTAattgaaaaatctgaaatacaTGGTTTTccctattttttttcccaaatctTGATTAGACAGGTTTGATGTCTAaagtttgtgttttagtttcacacagtttttagtagtctgtctgtctgttctatTACTGTTGCGTCTTTAACACAAAACAGAAGCGACAGATTTCAGGCACCAATTTAACACTTCTTTAATgctcatgattaaaaaaaaaaggtttttagagGTTGTCTAAGGTGCAGACAGGAGACTAAATAGTGccataaggatttttttttctggtgtcgGATCTTAAAGAGCAAAGTGCAAGTTTGTGGTAGACCAAGGGTCCAGAAGacaaaacagtgaataaataagtTTGATAGGGTCTGAGGTTTTAAACCAACACATCTCAAAACACTTTTATGTACTTTACTAGAAAATTAGAATCCAATAAGCTATACAAAAATTGATTCAGAATGTTTTTTGTCAGGAgtgcatttttacattattaaaaactgaACAATTCTCCCGTTTACGTGATTTTAACAGCACATTTGAATATGTGCATCACATTAAATACTGTAACAACATAAGGATTTAATGTTtcctctaaataaaaaaaaaaataaaaaaaaaaatcaaattattgGAATATATAAAGTTTTACAAATCTCAGTTTAGGCCATCTAATCATACTGCATTTCTCAGGAGTGTTTCAGTACTAAGCGTTTTTTTGAGTAAGGGTGTTTTTTAAAACCACCcctatttggtccagttaaaaaCCACTCTGGTTCATTTGCATCAttgatgctgtgtgtgtgggcaggTGTGAAACCCGTAATTGCAATGGGTAATGACCAAACCACCTGTGGGAGAAGGTGGTCTAGTTCTGGTTCCAAACAAACTCCACTATTAAATAAACTCctcatgtttgagctaaactgctgtacaggtgcagtttaatctgatttattgcCCAGATAATTACAACAGCTATTAACAatcactgtctctgctgctccatacTAAGCTGTTTTCCCACTGAggtaaagcagctttacactgtttactttctttctccccATTCTGACCAATAAGGGACTCATTATAGAATTATAAACCTGCCTTAAGTCTTAATACAGAGCAGCCAATCAAAATGCAGCTCATTGTCAGTCTTAAAAAGACAGTAGCAGAAACAGTGTGTCCATTTCTAGTGGATAAAAACAGGTTGGAAATTAGCCACGTAAATATAATTGATGTTTTGATATTTTAAGTGGAATCTGTGTAAATGAGATGTTTCAATGAACCATTCCTTTAAGACATGCAGGAAGTGCTGTCTGTATCTCAGGGGTTGGCTCAGAATGACCATAGAAATAATACACCTTAATGTTCACACACTGACAGGTACAGTATTTAATAGCCTAGATAATTAAgtttaacctctctctctcttttctttcccaGTCGTCTTATTTCATcactttttataataaaatacgcAGATAGAGAATGGTTTCAAAGTCAGCATCTACATGACTTCATAtatgctgtttttatcaaagttattgtttacattctgttaaagcttctttttttatttaaaacaaaagacAGTTTTACAATGTCTTAAGAGTAGATTACCAtgttaaaggtgagtgaggAGTTAATGGCTGTTTGCTGTCTGAATGCTGTATATTGAGGTATAAAGGGAATAATGTGGTTGAGAAAATGCTCTGTCACTCATAGCACTACAATCTTTTGCATTCTTTATTACTGGCATCAGATGTCATTTTGTTGTCTATTAAATtggtctgtttttatatttaa

Function

symbol description
tmem101 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM101 (transmembrane protein 101).

NR:

description
transmembrane protein 101

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239751.3 True 2694 mRNA 0.41 4 17483940 17491064
XM_015603207.2 False 2685 mRNA 0.42 4 17483919 17491064

Neighbor

gene id symbol gene type direction distance location
LOC111188179 NA coding upstream 59725 17423685 ~ 17424194 (+)
LOC103022777 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding upstream 73985 17397153 ~ 17409934 (+)
dmc1 dmc1 coding upstream 87862 17391730 ~ 17396057 (+)
tomm22 tomm22,LOC107554024,LOC107584213,LOC107692102 coding upstream 93494 17385894 ~ 17390425 (+)
tmem184b tmem184ba,tmem184b,LOC107690057,LOC107584104,LOC107692069,LOC107731404,LOC107554044 coding upstream 109797 17358723 ~ 17374122 (+)
g6pc3 NA coding downstream 30433 17521497 ~ 17534277 (+)
pagr1 pagr1,LOC107708911 coding downstream 305770 17796834 ~ 17802617 (+)
cabp5 cabp5a,LOC108425940,LOC107708978,LOC107562016,LOC107693687,LOC105909107 coding downstream 387531 17878595 ~ 17888249 (+)
nif3l1 nif3l1 coding downstream 405726 17896790 ~ 17903709 (+)
LOC103030008 NA coding downstream 425800 17916864 ~ 17924970 (+)
G37060 NA non-coding upstream 8148 17475418 ~ 17475771 (+)
G37058 NA non-coding upstream 13145 17470324 ~ 17470774 (+)
G37056 NA non-coding upstream 15147 17468480 ~ 17468772 (+)
G37055 NA non-coding upstream 15598 17467957 ~ 17468321 (+)
G37001 NA non-coding upstream 259512 17224041 ~ 17224407 (+)
G37066 NA non-coding downstream 18353 17509417 ~ 17509619 (+)
G37068 lsm12 non-coding downstream 18903 17509967 ~ 17517589 (+)
G37092 NA non-coding downstream 193648 17684712 ~ 17709836 (+)
G37089 NA non-coding downstream 202726 17693790 ~ 17698652 (+)
G37096 NA non-coding downstream 222397 17713461 ~ 17713687 (+)
tnrc6b tnrc6b other upstream 143027 17297479 ~ 17340892 (+)
LOC103027613 cdc42ep1,LOC106609444,LOC105025094,LOC106589540,LOC107734237,LOC107584101,LOC107690062 other upstream 201688 17250981 ~ 17282231 (+)
cby1 cby1 other upstream 249360 17232820 ~ 17234559 (+)
phf5a phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 other upstream 278886 17201497 ~ 17205033 (+)
sun1 NA other upstream 442962 17000382 ~ 17040957 (+)
LOC103045739 LOC103045739 other downstream 214615 17705679 ~ 17708597 (+)
G37098 NA other downstream 224065 17715129 ~ 17715992 (+)
G37099 NA other downstream 227167 17718231 ~ 17719376 (+)
G37131 taok2,LOC108425925,LOC108273910 other downstream 366853 17857917 ~ 17863066 (+)
G37152 LOC108425993 other downstream 461516 17952580 ~ 17960304 (+)

Expression


Co-expression Network