taok2 (taok2b,LOC107693686,LOC108273910,LOC107562015,LOC107708977,LOC107571768)


Basic Information

Item Value
gene id taok2
gene name taok2b,LOC107693686,LOC108273910,LOC107562015,LOC107708977,LOC107571768
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17839427 ~ 17872154 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248689.3
ATCGGTTCATTAAAAAGAACCGATTCAAAAGAACCGAACCCCATTGAGACGCTCGGAGCTCCGCTTTCCGTTTTCCTCTCGGCTCCCGCCCCGCTCcgccatcacacacacaaaaagcacactgaggggaaagagaggggATGAAAATGGAGATGTTGGTGTCGAACAGAGGCGAATTAAACGAGTGACACCAACGTAATGAGCAGAAGTGCTGAGAATGGGAGCTGGAGCGGAGCGAGGCTCGGCTCTGTGAAGCGGTTCAGCCGTGTTTCGCTGAGGATCAGCTGATGGTTCTCTCAGCCTCGGCCGGAGAGTAACGCGAGCAGCGCCGCTTTTAGTCCCCAAAAACGCGAACAAATCCCGCAGCCAGCGCTGTTTCTTATTCATCCGATCCACGGGCGGCTTCCAAACACCTGAATCCATGGCGGGTCGTGTGGATGAGGCGGCCCGGTGCTGAGTGAAGAGGAGACGGGGAAGAAAGGACCGGATTTTGCTCTCCAGGCCGGAGCGTTAGCTAGCATTCGCTAGCTACGGCGAAGCCTGTGAATCACGGCGCTGGCCATGCCGTCGACTGCGCGGGCAGGGAGTTTGAAGGACCCGGAGGTGGCTGAGCTCTTCTACAGGGAGGACCCGGAGAAGCTCTTCACTGACCTGCGCGAGATAGGCCATGGCAGCTTCGGAGCCGTCTACTTCGCCCACGACATCCGCACCAATGAGGTTGTGGCCATCAAGAAGATGTCCTACAGTGGCAAGCAGTCTAAcgagAAGTGGCAGGATATTATCAAAGAGGTGAAGTTCCTCCAGAAGCTGCGGCACCCCAACACTGTGGAGTACAGAGGCTGCTACTTGCGAGAGCACACAGcatggCTGGTGATGGAGTATTGTTTGGGGTCTGCCTCAGATCTGCTGGAAGtgcACAAGAAGCCTTTGCAAGAAGTGGAAATTGCAGCCATTATCCATGGTGCACTGCAGGGCCTGGTATACCTCCACTCACACAACATGATTCACAGGGACGTGAAGGCTGGAAATATCTTGCTGACAGAGCCAGGCCAGGTCAAACTGGGAGACTTTGGCTCTGCTTCCATCGTTGCCCCCGCCAACTCGTTTGTAGGCACACCCTACTGGATGGCTCCAGAGGTGATTCTGGCCATGGACGAGGGCCAGTATGATGGTAAAGTGGATGTGTGGTCACTCGGCATCACCTGTATAGAGCTGGcggAGAGGAAGCCTCCCTTGTTTAACATGAATGCTATGAGTGCCTTATACCACATCGCCCAGAACGAAAGCCCAGTCCTGCAGTCTAATCACTGGTCAGATTATTTCCGTAACTTCGTGGACTCCTGTCTGCAGAAGATTGCCCAGGACAGACCTACCTCTGACGTGCTGCTTAAGCATCATTTCCTGTGTCGGGAGCGCCCACTGACGGTGGTGATGGATCTGATCACACGCACTAAAGATGCTGTGCGAGAGCTTGACAACCTGCAGTACCGCAAAATGAAGAAGATCCTCTTTCAGGAAACGCACAATGGCCCTGCCGCTGAGGgtgcagaggaggaggagGACGTGGAGCAGTACATGCTGCGGACGGGGACGGTGAACAGCATGGAAAGCTCCCATTCGCTGCCCTCAATGTCCATCAGCGCCAGCTCCCAGAGCTCCTCCGTGAACAGCCTGGCCGACGGCTCGGACGACAGCGGGGAGATGGCCATGATGCAGGAGGGAGAGCACACGGTCACCTCCAACAGCTCTGTGCTGCACAAACCCCTGAGCCATGACAACATCTATGACGATCCCTACCAGCCAGAGGTGGACTCCCAACAGCAAGGCCCATCCAGCGGCGGGGGCGGGGGTGGTGGCGGCGGTGGTGGGCGCCGACGGCGTGGCAGGGATCACTTTGCCACCATCCGTACGGCATCGTTGGTGACGCGTCAGATCCAGGAGCACGAGCAGGGCTCGGCTCTGCGGGAGCAAATGTCCGGCTACAAGCGCATGAGGCGGCAACACCAGAAGCAGCTGATGGGGCTGGAGAATAAGCTGAAGTCTGAGATGGATGAGCACCAGCTGCGGCTGGATAAAGAGCTGGAAACACAGAGGAACAACTTCGGCAGTGAGAGCGACAAGCTCAACAAAAAGCACCAGGCTATACTGGAGAAAGAGACTAAAGGAGCTTCTACAGAGGAGAAGAAGTTCCAGCAGCACATCCTGGGTCAGCAGAAGAAAGAGCTTACCACTCTGCTGGAGTCTCAGAAACGACAGTATAGGCAGCGTAAAGAGCAGCTGAAAGAGGAGCTGAATGAGAACCAGTCTACACCAAAGCGAGAGAAGCAGGAGTGGCTGGTGCAGCAGAAGGAGTGTCTGCAGCAGCACCAGGCCGAGGAGGAGGCGGGGCTGCTGAGGCGCCAGAGGCAGTACTACGAACTGCAGGGCCGTCAGTACAAGAGGAAGATGCTGCTGTCCCGACATAACCTGGAGCAGGACCTGCTCAGAGAGGAACTGAATAAGAAGCAGACACTGAAGGACCTGGAGTGTGCCATGCTACTGCGGCACCACGAGTCCACGCAGGAGCTGGAGTTCCGGCAGCTGGGCCTGGTGCAGCGCACTCGTGCTGACCTGATCCGCACACAGCACCAGAGCGAGCTCACTAATCAGATGGAGTACAACAAGCGGCGCGAGCAGGAGCTCCGGCAGAAGCACGCGATGGAGGTCCGCCAGCAGCCCAAGAGcctgagaTCCAAAGAGCTGCAGATCAAGCGTCAGTTCCAGGACACGTGTAAGATCCAGACGCGACAGTACAAGGCCCTGCGGAACCACCTGCTGGAGAACACGCCCAAGTCAGACCACAAGGCCGTGCTGAAGAGGCTGAAGGACGAGCAGACCCGAAAGCTGGCCATCCTGGCCGAGCAGTACGACCACTCCATCAACGACATGCTGTCCACACAGGCTCTGCGATTGGATGAGACTCAGGAGGCGGAGTATCAGGCTCTGAGGATGCAGCTGCAGCAGGAGTTGGAGTTGCTGAACGCCTATCAGAGCAAGATTAAGATCCACACCGACACGCAGCACGAGAGGGAGGTCAAGGACTTGGAGCAGAGGGTGTCCATCCGCAGGGCTCTACTGGAGCAGAGGATCGAGGAGGAGATGCTGTCCCTGCAGAACGAGCGTTCAGAGAGGATCCGATCCCTGCTGGAGCGTCAGGCCAGCGAGATCGAGGCCTTCGACTCGGAGAGTTTACGCCTGGGCTTCAGCAGCCTGGCTCTGACAGGCATCCCATCTGAGGCCTACCCCAAGCAGGGTTACCCGTCCAGCCAGACCCCGCGCTCCTCCAGCCACTGGAGCCACGGAGGGGGTCCGCACCCCCACTCCCGCCGGGGCCCCAGCCGGGCCGAGTCATCGGCCTCCGCCTCCTCGGCCCACGCACTGGGTCTGGCCCGGGACGGCCCTGTGCACCACTCATCtcgctcctcctcttcctcctcctcctcatcctcctcctctcaccaccaccaccgccaCCACCTCCCCCAGCACTACCACCACCAGAGCACGCCCCAGCTGTACCGGGAGCGGGAAAGGGACCGAGAGAGGGAgcgggagaaagagagggagtgggGGGGAGTAGGAGGGAGCGGGGGGGACCTCGCCCACCCCCACGCCTTCCCCCACCACCTTCCCTCCCGCTCCTCTTCCCAGTCCCTGGctctcctccctcctcctcccccaGCCCCACCCTCCATTtcgctctcctcctcctcttcctccggCCAGGCCTCgtcatcctcctcctcatcctcacaGGGGATGTACGGAGGAGGAGGGGGCCTGGTGGTGAGAGGTCCCAGTCTGATGGCCCTGAGGAACAGCCCTCAGCCCCTCCGCAGAACGGCCTCCGGCGGCGGCCCGGGGGGTTCAGGTGCCGGGGACGGAGTCCTGAGCCGCAGCACCTCGGTCACCTCCCACATTTCTAACGGATCGCACCTCTCCTACTCCTAAGGCCTTTACACACCGGACGTGATCGGATCCTGCAGATTTATACAAATGCTAATTCACTTTAAACCCATTGACGTCTTGCAGAGTGACGGCAGAGTTTTGATAGAAGAGACGAAGCGAATGCATTCAAATAAGTTTGGAAgtcgctatctctctctctcgtgttgGCATGGGGACAACCAAAAGACTGAAtgaaaaaatcaataataattatacaataaatatttaactatATAAAGCAACAAACAATATGGTCAGGACATCTAAAAGAATGTGTAGAAGTGCTCAGGCACTTTTCCAAGTGTTAATGTGGGATGTACCCAACATCAGTGtttgcactttttctttttttggtgaAGTGCAAAAGGACATTTTTGTCCTTGTTTATGTTTCAGAATCTAAACATTGCATAcataaatattaacaaattagATTTCCAAAAGCTCCTAATTTTCCTGCCGCTATTTTCCATCACGTTCGGTGTGTACAGGTCTTTAGACCAAAGGTCGGAAGCGAGAGGGCTCAGGGTCGCCTCGccttttttcaaatctgatgATCCGATGAAGGTGTTTAAAGCAAAGCGATAAGAGGAATTAGAGAGCACATCTTAATTGTATTCTTTTAGTTTTGCTGTTTATGGTTTTagatgtttctgttttttaaacctttttttgtaagggagtttaaaaaaacaaggaaacaagaATCAAACACTTACTTGACTGGCTTGGAACATCACCACTGCCTTTAAGGATTGTTAAAAGAATGCTGTGCTATATAGATTTTGGTTGGGTGAATTTACGAACACATACACGAAACACACGAACAcagaatgtttttaaaattcaaCTACTAAGTATTTCAACACTtagatgtgtttaaaaaatgaaaaaagaaaacagctcTGTTGTCAGACTTTACAATAACATTCTTGTCTGTGGGAGTTGCTTCAGTGCATGAGATTAATgtacaaaatacatttgtatTCATATGTTACCCAGTCACATTTGAGACGTAAGGCTACTGTAACTGTccggaaaaaacaacaaacatagACGTTTAGAGTCACATTTCCCACCGGTTGtaaattttattgtatatagtaTCTGAAGTGTTGAAGCATTGTGTCCACAGTTTTCTATAGTATCAATGATTACCATAACTTTGATATAACAAAATGTGAATGGATTATTGCCTAACATTTAGCGGTAGGTGATTACAGCAGGGGTTGTGCCCCTAGAGCGCAACTCTTAGTACCTTATTTGTCGTTATCATGTGCACATTTTGATttccaaatacaaaaataagtcagctttgatatatatatatattttttgttttgttgtaaatGAAATCATTTAAACCGCAAAAAGTGTTACTTTTTGTCAGGTCTGTTGTGTTTGgaattaatggttattaatacttgattattaataattgttaatagtcaggttgtgtgtgtgtgagcgcgtGGTGGCCGAATGGTACACAATCAATAATAATGCcacatttcttttctttaccaAATTGTGATGGAAGAGAACGTCTAGTTCTTAAAGATGGGTGTGAATTATTCCAtgttaaaatgacaaataacACGAGTGTTGTAGTTTCATTGGATTGAAATTGCCTAAAGATTATGGACTGAAGTTTTAAGGGCAGGAATAATAACCAGTAGGATATCGGATGGTTTAACTAAGGTCCAACTTTGCTTTTTAAAGGACTGGAGATTCTGGGGTGGTTCACATTGCGTCCAAATTGAGGGTGATTTTCTGATATCAGTGTGTTTCCTTGTTAGATTTCCCTGTTTTCTCCTCTTCTTTGGCAAAACTGGAGAAAGTGCAGTCCCGAGCTAACTTCAGAACATCTGTGAAGACAGTGATGGGGCATACGCAAGAATAAAAGGCATCCAGCAGAACTCGCACGATCCCCAGTCCAGAGGTCTCCAAGACTGTAGTTTTGCTCTAAGACACACCAAGTTCTGATCCCTTAATGAACTTgagcagaaaaaagaaagaaaaaaatgatgaaaaactgAGAAACACCAGCTCTGACGACTCTGTATAACCTCCTCCTTTATGCTTGGTTTAaagtcaaaagaaaaaaaaacagtgcatgCAGAACTCCTTATGTATCTTGAGTGTAGGGTCCAGTAGTCAGAGGGCCGATGAGGTTGTGCCACAgcgatggattttttttgttcccaTCACCGGTTCCTCTGGTCTCGGAGCTTCCACAATCAGCTCGAAAACACTATAAGAGGCAAGGGCTAACGCTGACCGAGCCGACCCCGGTGAGCGGATCCATGTCCAGTGGTAAAGGAGGCTCTCCTTGTTTGTTTTATGCCGAGGTTTCTCGGGCGACGGGGGTCAGATCtcgtctgtctgtccatctggcCCGAGTACTCGTAGGCTGACTGTGAACGTGACTGTTGGGTTAGAAGTGGAGGTTTTGCTTGAGAGgacatttttaatactttaaacttACGAAATCCACGCACTGAGCTGCTTTCAGCTCAGCCGGAACGGAGTCGTATGAACATGTGTTGAACAAAATGAGAAGTAATTTAAAAGGTAATAAATTGATATTAACATGGAA

Function

symbol description
taok2b Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within midbrain development. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human TAOK2 (TAO kinase 2).

NR:

description
serine/threonine-protein kinase TAO2 isoform X3

GO: NA

KEGG:

id description
K04429 TAO; thousand and one amino acid protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248689.3 True 6585 mRNA 0.51 20 17839427 17872154

Neighbor

gene id symbol gene type direction distance location
maz maz coding downstream 2521 17822758 ~ 17836906 (-)
LOC103047174 fam57b,fam57bb,LOC108274141,LOC106583943,LOC107578766,LOC106579402 coding downstream 19147 17803734 ~ 17820280 (-)
wnk4 NA coding downstream 55149 17711000 ~ 17784278 (-)
lsm12 lsm12,LOC107708984,LOC107693683,LOC107562026 coding downstream 321717 17509960 ~ 17517710 (-)
LOC103024821 LOC108425935 coding downstream 334610 17500469 ~ 17504817 (-)
LOC103022355 NA coding upstream 32050 17904204 ~ 17918797 (-)
prodh2 prodh2,zgc:92040 coding upstream 57153 17929307 ~ 17939085 (-)
LOC103023166 LOC108425993 coding upstream 69696 17941850 ~ 17960291 (-)
ppp4c ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 coding upstream 89776 17961930 ~ 17971020 (-)
LOC103023915 NA coding upstream 100434 17972588 ~ 17986489 (-)
G37333 LOC103045739 non-coding downstream 130822 17705734 ~ 17708605 (-)
G37309 NA non-coding downstream 283505 17553572 ~ 17555922 (-)
G37298 tmem101,LOC107720276 non-coding downstream 345012 17488885 ~ 17494415 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding downstream 449006 17385841 ~ 17390421 (-)
G37254 tnrc6b,LOC107690060 non-coding downstream 502105 17335591 ~ 17337322 (-)
G37443 NA non-coding upstream 254380 18126534 ~ 18126807 (-)
G37444 NA non-coding upstream 255100 18127254 ~ 18127560 (-)
G37449 NA non-coding upstream 265795 18137949 ~ 18139122 (-)
G37450 NA non-coding upstream 268638 18140792 ~ 18141076 (-)
G37451 NA non-coding upstream 269853 18142007 ~ 18142377 (-)
vps25 vps25 other downstream 43439 17789951 ~ 17795988 (-)
cntd1 NA other downstream 134404 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 150043 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 362549 17473910 ~ 17476878 (-)
G37290 NA other downstream 373403 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 410336 18282490 ~ 18317957 (-)
G37603 NA other upstream 700537 18572691 ~ 18573176 (-)
G37616 NA other upstream 761424 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1672071 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1946114 19818268 ~ 19825652 (-)

Expression


Co-expression Network