Gene
RNA
| Item | Value |
|---|---|
| gene id | G52440 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 2512957 ~ 2513671 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59737 | True | 234 | lncRNA | 0.48 | 3 | 2512957 | 2513671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_02403219_02417215 | FAM160A2 | coding | downstream | 95742 | 2403156 ~ 2417215 (-) |
| CI01000009_02391182_02393863 | NA | coding | downstream | 119094 | 2390445 ~ 2393863 (-) |
| CI01000009_02358636_02361913 | HPX | coding | downstream | 151008 | 2358470 ~ 2361949 (-) |
| CI01000009_02352214_02356619 | NA | coding | downstream | 156116 | 2352214 ~ 2356841 (-) |
| CI01000009_02327693_02335035 | NA | coding | downstream | 177922 | 2327693 ~ 2335035 (-) |
| CI01000009_02591882_02593586 | RPL8.S, RPL8 | coding | upstream | 78192 | 2591863 ~ 2593761 (-) |
| CI01000009_02610459_02610721 | NA | coding | upstream | 96589 | 2610260 ~ 2610721 (-) |
| CI01000009_02654102_02655554 | CASK | coding | upstream | 140431 | 2654102 ~ 2656438 (-) |
| CI01000009_02682050_02707583 | NA | coding | upstream | 167937 | 2681608 ~ 2707623 (-) |
| CI01000009_02786421_02791586 | NA | coding | upstream | 272640 | 2786311 ~ 2792435 (-) |
| G52379 | NA | non-coding | downstream | 61317 | 2448366 ~ 2451640 (-) |
| G52378 | NA | non-coding | downstream | 85109 | 2427249 ~ 2427848 (-) |
| G52330 | NA | non-coding | downstream | 111577 | 2401035 ~ 2401380 (-) |
| G52328 | NA | non-coding | downstream | 112063 | 2399814 ~ 2400894 (-) |
| G52371 | NA | non-coding | downstream | 124418 | 2388314 ~ 2388539 (-) |
| G52409 | NA | non-coding | upstream | 50091 | 2563762 ~ 2566564 (-) |
| G52406 | NA | non-coding | upstream | 60815 | 2574486 ~ 2578978 (-) |
| G52469 | NA | non-coding | upstream | 297374 | 2811045 ~ 2811334 (-) |
| G52478 | NA | non-coding | upstream | 309291 | 2822962 ~ 2823928 (-) |
| G52488 | NA | non-coding | upstream | 398634 | 2912305 ~ 2912542 (-) |
| G52098 | NA | other | downstream | 1105330 | 1401932 ~ 1407627 (-) |
| G52410 | NA | other | upstream | 38053 | 2551724 ~ 2562533 (-) |
| CI01000009_02885473_02893975 | NA | other | upstream | 370017 | 2883688 ~ 2893975 (-) |
| CI01000009_03261739_03262843 | NA | other | upstream | 747532 | 3261038 ~ 3262843 (-) |
| G52828 | NA | other | upstream | 1703749 | 4217420 ~ 4231469 (-) |
| G53515 | NA | other | upstream | 2988724 | 5502395 ~ 5505248 (-) |
