aldoa (aldoa,aldoab,LOC101465268,LOC107720037)


Basic Information

Item Value
gene id aldoa
gene name aldoa,aldoab,LOC101465268,LOC107720037
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18043042 ~ 18056729 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248698.3
AATACAGTGTCGAGGAGGACGAAGGGGCGTCACGGGCTTGAGCCAGGTCTTTTACTctgccccctctctctctcttcctctcactcttgcAGAGTCCCTCCATTCCCTCAGGTGTCCTCTCAGCTAGAAAGtgGTACGATGCCTCACGCATACCCATTCCTCACCCCTGAGCAGAAGAAGGAGCTCAGTGATAATGCTCTGAAGATTGTAGCCCCTGGCAAGGGTATCCTCGCTGCTGATGAATCCACAGGCAGCGTTGCTAAGCGCTTCCAGAGCATCAATGCTGAGAACACTGAGGAGAACCGGAGGTTCTACCGCCAGCTGCTCTTCACCGCTGACGACCGCATCAAGCCCTGCATCGGTGGAGTCATCTTCTTCCACGAGACTCTCTACCAGAAGACTGATGATGGCAAGCTCTTCCCCCAGCTGATCAAGGAGAGAGGCATGGTGGTCGGCATCAAGGTGGATAAAGGTGTCGTCCCTTTGGCTGGAACCAATGGAGAGACCACCACCCAGGGTCTGGATGGTCTGTACGAGCGCTGTGCTCAGTACAAGAAGGACGGAGCCGACTTTGCTAAGTGGCGCTGCGTGCTGAAGATCACCCCCACCACCCCCTCCAGCCTGGCCATCAAGGAGAATGCTAACGTTCTGGCTCGCTACGCTAGCATCTGCCAGATGCATGGCATCGTGCCCATCGTGGAGCCTGAGATCTTGCCCGATGGCGACCACGACCTGAAGAGGTGCCAGTATGTGACCGAGAAGGTCCTGGCTGCTGTCTACAAGGCTCTGTCTGAGCACCATGTTTACCTGGAGGGAACTCTGCTCAAGCCCAACATGGTGACTGCTGGCCACTCCTGCTCCCACAAGTACAGCCCCCAGGAGATCGCCATGGCAACCGTCACCGCCCTGCGCCGCACCGTGCCCCCTGCAGTCCCTGGCATCACGTTCCTGTCTGGAGGCCAGAGTGAGGAGGAGGCTTCAGTCAACCTGAACGCCATGAACATGTGCCCCCTGCACCGACCCTGGGCCCTCACCTTCTCCTACGGCCGTGCCCTGCAGGCATCTGCCCTCAAGGCCTGGGGTGGCAAGAAGGAAAACGCCAAAGCCTGCCAGGAGGAGTTCGTCAAGAGAGCTTTGGCTAACAGTGCAGCTTCCATCGGTAAATACGCTTCCGCTGGCGATAAAGGAGCAGCTGCTGGAGAGTCCCTGTTCGTGGCCAATCACgcttattaaagcatttaaccACTGTTTCCAACCAAATCACCGTCAGAAGCACCTGCGTAACCGCACGGCTCCCCGTCCCCGTCCTCCCATCACCGTTTAGCCCAGCAAGAAGAGGATtctcaagagagagagagagagagctcactGTCTTTGTACCTGTGGAAGACCTCTTAGTATTTGTGTTTTCCCCCATTTTTAGGTGTAactttaatttctttcttttttcatatgATACGTACACACTGTGTTGTACTgcgacaaaaaaataaagaactgaCTAACCCACA

Function

symbol description
aldoab Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in adaxial cell; cardiovascular system; fin; musculature system; and somite. Orthologous to human ALDOA (aldolase, fructose-bisphosphate A).
aldoa Enables several functions, including fructose binding activity; fructose-bisphosphate aldolase activity; and identical protein binding activity. Involved in several processes, including binding activity of sperm to zona pellucida; fructose 1,6-bisphosphate metabolic process; and purine ribonucleotide metabolic process. Located in several cellular components, including actin cytoskeleton; extracellular exosome; and sperm head.

NR:

description
fructose-bisphosphate aldolase A

GO:

id name namespace
GO:0001756 somitogenesis biological_process
GO:0006096 glycolytic process biological_process
GO:0043473 pigmentation biological_process
GO:0007409 axonogenesis biological_process
GO:0007420 brain development biological_process
GO:0001966 thigmotaxis biological_process
GO:0004332 fructose-bisphosphate aldolase activity molecular_function

KEGG:

id description
K01623 ALDO; fructose-bisphosphate aldolase, class I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248698.3 True 1511 mRNA 0.55 7 18043042 18056729

Neighbor

gene id symbol gene type direction distance location
LOC103046263 NA coding downstream 27948 17992067 ~ 18015094 (-)
LOC103023915 NA coding downstream 56553 17972588 ~ 17986489 (-)
ppp4c ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 coding downstream 72022 17961930 ~ 17971020 (-)
LOC103023166 LOC108425993 coding downstream 82751 17941850 ~ 17960291 (-)
prodh2 prodh2,zgc:92040 coding downstream 103957 17929307 ~ 17939085 (-)
LOC103046869 NA coding upstream 43837 18100566 ~ 18117853 (-)
LOC103029702 LOC108441164,LOC108413442 coding upstream 66292 18123021 ~ 18126382 (-)
LOC111192381 NA coding upstream 86088 18142817 ~ 18160060 (-)
LOC111192382 NA coding upstream 164142 18220871 ~ 18232563 (-)
LOC111192383 NA coding upstream 178409 18235138 ~ 18241122 (-)
G37333 LOC103045739 non-coding downstream 334437 17705734 ~ 17708605 (-)
G37309 NA non-coding downstream 487120 17553572 ~ 17555922 (-)
G37298 tmem101,LOC107720276 non-coding downstream 548627 17488885 ~ 17494415 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding downstream 652621 17385841 ~ 17390421 (-)
G37254 tnrc6b,LOC107690060 non-coding downstream 705720 17335591 ~ 17337322 (-)
G37443 NA non-coding upstream 69805 18126534 ~ 18126807 (-)
G37444 NA non-coding upstream 70525 18127254 ~ 18127560 (-)
G37449 NA non-coding upstream 81220 18137949 ~ 18139122 (-)
G37450 NA non-coding upstream 84063 18140792 ~ 18141076 (-)
G37451 NA non-coding upstream 85278 18142007 ~ 18142377 (-)
vps25 vps25 other downstream 247054 17789951 ~ 17795988 (-)
cntd1 NA other downstream 338019 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 353658 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 566164 17473910 ~ 17476878 (-)
G37290 NA other downstream 577018 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 225761 18282490 ~ 18317957 (-)
G37603 NA other upstream 515962 18572691 ~ 18573176 (-)
G37616 NA other upstream 576849 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1487496 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1761539 19818268 ~ 19825652 (-)

Expression


Co-expression Network