htr7 (htr7,LOC107758424,LOC107669182,LOC107594208,LOC107584235,LOC107753458,LOC107683721)


Basic Information

Item Value
gene id htr7
gene name htr7,LOC107758424,LOC107669182,LOC107594208,LOC107584235,LOC107753458,LOC107683721
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 42719 ~ 47563 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251148.2
CTGAAGTTGTAGGACTATCAAGCATCATCTGAACATGATGAGCAGATCCATGCTCTGAGGGGGGCTGTGACATCACTCCTGGTATAAAGCCCCTCTGTGGAGGCagcactttcacacacactcgctcacagCACACATGGGGACCAGCACGAGAAGTTAGTCCTGCATCGTGAGACAGCCGGTATAACCGATGGATTGGAGCAGCAGAAGCATGAGAGCAGCATGAGAGACGGCATGTCCAGCCTGACCTCCCAGATCCTGGACCTGCGCGTGGGGAAAGTGCAGGACAGAGCCACGGTTCCAGCCTCAAGTTTGCTGGAGAACGAGACGGGCTGCGGGGAGCAGATCCTGAGCTACGGCCGGGCTGAGAAGGTgctgataggaggagtcctcaCCATGCTCACCTTCCTCACCATCTGCGGGAACCTGCTGGTGGTCATCTCCGTCTGCTTCGTGAAGAAGCTGAAGCAGCCCTCCAACTACCTGATCGTGTCCCTGGCCGTGGCCGACCTGTCCGTGGCCGTGGCCGTCATGCCCTTCGTCAGCATCACTGATCTGATAGGAGGACAGTGGATCTTTGGACGAGTTTTCTGTAACGTCTTCATCGCCATGGATGTGATGTGCTGCACAGCCTCTATCATGACTCTGTGTGTGATCAGTATAGACAGATATCTGGGCATAACTAAGCCGCTGACGTATCCCGTGCGACAGAGCGGAAAGTGTATGGCTAAAATAGTGCTGTCCGTATGGCTTCTGTCGGCTTCCATCACACTGCCACCTTTATTCGGCTGGGCTCAGAACGTCAACGACGACAACGTGTGTTTGATCAGCCAGGACCTGGGCTACACTGTCTACTCCACAGCCGTGGCCTTCTACATCCCCATGTCTGTCATGCTCTTCATGTACTACAGGATATACAGGGCTGCCAAAGTAAGCGTTGCCAAGCACGCCATCGCCATCATGCCCAAAGACGAGGACAACCGTGTGGACTGTGTTTCAGCTGTGCTGAAGCTTCAGAGGGACGCGGAGGACTGCGGCAGCTTCTCGCGTCTTCTGAGGAACGACCGCAGGAACATCTCCATCTTCAAGCGTGAGCAGAAGGCGGCGGCTACACTGGGTATAGTGGTTGGGGCCTTCAGTGTCTGCTGGCTGCCTTTCTTCCTGCTGTCCACTGCACGTCCCTTCATCTGCGGTGTGACGTGCAGCTGTGTGCCCCTGTGGGTGGAAAGGACCCTTCTTTGGCTGGGTTATGCCAATTCCCTGATCAACCCCTTTATATACGCCTTCTTCAACAGGGACCTCAGGACCACCTACCAGAACATCATCTGCTGCCGATACCGCAACATCAACCGCAAACTCTCTGCAGCCAGCATGCACGAGGCCCTCAGATTAGCAGAAAGGCCAGGCATGATGATGTAGGCTGGTCATAAAGGGAAACATGTTTCCATCCCCCCCATAAATTTGGGGTTTTCAAGGGTTGAATGGTTTGGAACTATGTCAACTTAGAGTGTTTTCACTCCTTGGAACGGTTAGTTTCAGCAGGTGTGAATGCAGTAATAACACTCTGGTGCAAAGCAAAACAACTATACCGAGACCCGCAGGAGGAGATGGGTTCGGGCTACAGCAGTTAGTTTGTAACTAACTCTTGTAGCTCtttgagctaaacagctgttcaggtgcagtttaacctgatttaataCACAGATAATTAGTCCAGCTATTAACAAATGCATTTTCTGCTGCTGCGGCTTCATGCTAAATTGCACTGAAATACATTCTAATCCAGAACAaaggaccttcttcctgtatttactttgttCTGCCCCAAACAGCTCGAAccaataagtaaagaaaatatcaTCATATAGTTTGTTGTGAAATAGTTTGATGTGACACATTTTGTTGCATTCGTGgttttgcctgtgtgaaaccaaaccaaaccaagtagAAAAATGCACCAAGTTAATGGACTcttaaactgattcagaccacaGAAttgaactacaggtgtgaaaacacttttaatgCACAATGGATCTTCGATTCTTGGATTCTTCATATATGACATACctcttgtatatatttttatggacATTTCAAAAGAAATGATTGTATATAACACCAAAAGTGATTCCACTATTGTTACGGGTCAGAGAACATCTTTTCAGAACTAATGTATATAGAATCCTTTTGATCAGAGAGTGTAAGAACAGTGCCACACAGAGACTTATTCCAGCGGATGGTTCTTTGACGGACCATTCTATTGACATGGACTTTTGGGAACCAAGTGTGGCTAGTCTAAAGCATCAGTAGGTCATGTACTTCTTACATGTGAACAGACATTTTTATGCACCTTTCAAATACTGTGCTGGGCTCGTGGGACTCAAAGGAGACCTGTGGATAAAGTaacaaaagtgcaaatacaaCCTGTATGGACAAGAGCGAGAAGCCAACATCGCTGAGGACCTTTAACCATTTTCCGTCACTGGGTTTCActgatgaaaatgaaaaaaaatgcatttactgCATCTATGTTATTATTAACACGGTTTTCAGGTTCAGGttcaaaataacttattttgtCCATTCACATGCAGTTGTATGCAAAATTGTGGACACCCTCTGGCCAAATGTCATATTGTATTTCTGTGAAGGGAAGTAAACAACCTCTGCAGAAAATAGACAGCAGTCAAATAATAAGTATAAGTATGACAGAACAGCTTATTTTTATCCTCTAACTTGTATTTCCCTATCTGGTGTCTAATTTCAACAGTTAGTTACTCTTTGTTAATGTTGTCACAtaatttcccccaaaaaaatcagttttaaaaaatgtctctCCATGCCTAGAATGTATGTGAATGTTGGAAGTGTAAACATAATGAGTTATTTACCAGTTTTGGGGTTTTGAATCGGCTCATTGTAAAGGTTTGTTTTGGTTGTCAGATTTTCTCTAAAGGAATGTTCAAGTATTTCACTTTATTGTAATGAActtcctgtttttatttaaccatACCAAGATAAAAACAGCTTTCCATTCTATGACACCTTTAATGCATATGGCTGTTGAAGGTAAGCACAATTTTGTAAGGTGACAGATCCTAATGACACTTCTAAACTTGCCCAATCAGTTTTAATGAGTCAATTAAAAGCTATTGAGTTAATGAAGTCAGAGCATCATTAGACACTATTTTGTAAGGCACATGACTATGTGAAATTAGCTGGGGCTCTTAATAATTGCACATAAAAATCATAAGCTATACCAGATGTGTCAAGCAACAGAAAATCACTGTTAATAACATTTACAAAACAGTGCAGTTAGCTTAAGTTTGGGATCAGATTTGTTAGGTGACTACAGTCTGGTTTGTATCCTGATAAGATTTTATTtcacatacatttacatttggtAGTCAAATCCAATTTCTGTGATGGATAGAATATGGAGAATTCACTCATTCCAAATTAATTGTTGCTAGAGCTTTGGTTGCACTGGACCTTTTGGTTTTACTTTGAGAAGTTTTGGTCTCCATAGAAGGATTTTTattgtactgggaggagttttggttgtattaGGAGAAGTTTGGGTTatactgggaggagttttggttgtattaGGAaaagttttggttgtactgggaggagttttggttgtc

Function

symbol description
htr7 Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; chemical synaptic transmission; and regulation of synaptic vesicle exocytosis. Predicted to be located in plasma membrane and trans-Golgi network membrane. Predicted to be active in dendrite. Predicted to be integral component of postsynaptic membrane and integral component of presynaptic membrane. Implicated in alcohol use disorder.

NR:

description
PREDICTED: 5-hydroxytryptamine receptor 7

GO: NA

KEGG:

id description
K04163 HTR7; 5-hydroxytryptamine receptor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251148.2 True 3653 mRNA 0.44 2 42719 47563

Neighbor

gene id symbol gene type direction distance location
LOC103045384 si:dkey-100n10.2,LOC108424892,LOC107758432,LOC107584158,LOC107661094,LOC108273498,LOC107727700 coding downstream 409608 457171 ~ 483231 (+)
acbd4 LOC107662569 coding downstream 688265 735828 ~ 745143 (+)
LOC103047415 LOC103469343 coding downstream 705025 752588 ~ 754996 (+)
LOC103022594 LOC108424886 coding downstream 790742 838305 ~ 850262 (+)
trnac-gca_9 NA coding downstream 833804 881367 ~ 881438 (+)
G33147 NA non-coding upstream 3703 38493 ~ 39016 (+)
G33141 NA non-coding upstream 18857 21445 ~ 23862 (+)
G33160 NA non-coding downstream 10066 57629 ~ 58188 (+)
G33211 NA non-coding downstream 223087 270650 ~ 306318 (+)
G33206 NA non-coding downstream 240469 288032 ~ 324053 (+)
G33231 NA non-coding downstream 313864 361427 ~ 362460 (+)
G33235 NA non-coding downstream 322102 369665 ~ 372776 (+)
rpp30 rpp30 other downstream 48740 96303 ~ 101051 (+)
LOC103039306 pcgf5,LOC108410714,LOC106589380 other downstream 80793 128356 ~ 166390 (+)
hectd2 hectd2,LOC107584154,LOC107594154,LOC107758436,LOC107753452 other downstream 133506 181069 ~ 231917 (+)
LOC111192417 NA other downstream 371447 419010 ~ 424471 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other downstream 935604 983167 ~ 985381 (+)

Expression


Co-expression Network