tmem184b (tmem184ba,tmem184b,LOC107690057,LOC107584104,LOC107692069,LOC107731404,LOC107554044)


Basic Information

Item Value
gene id tmem184b
gene name tmem184ba,tmem184b,LOC107690057,LOC107584104,LOC107692069,LOC107731404,LOC107554044
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17358723 ~ 17374122 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251250.3
gttcagttatAATCCTCTCAGTGTCTGTCGGGCTGCGCTGTGTTGCTGCTGGTGAAGCGGCTGCTGGGAGAGTAGAGTTACTTACAGACGGGAAGTTTCTCCGGTTTTTCTACGGGACTTTCTGAGGGTAGAGCGGGTCTGAGCTTCTCTGAGAGGACGCTGTTTTTCCTAATGGCGGAGAGGAAAGCTGCTGTAAATCCTACGCTGCTCGGAGAAAGGAGGGTAAATAAACCCGCGGCCATGACGGAGAGGATTTAGGGCCCGAGCCGCTtcgtctgctgctgctgctgctgtccccTTCCTCCAGAGCCGCTGCGCCGCTTTCTTCACACACAGCGTTACTGAGCCTGATGTACCGGCTGTGGAGACGTGACGTACCGTTGCCAGAACGCTTTGGGGAAGACTCAGTGGCCGCGATGGCTCCAGGATCTCCAGCCACGGCGGCCCCTGCTGGCCCAAACATTTCCTGGCTGCCCGAGGTTCCACTGCTCACCCCCGAGCGCCCCATCTTCATCATGACCACCACGGCTCAGGCTCTTGCTGGATTCTTCGTGTGGACGGCTCTGCTGCTCACCTGCCACCAGaTCTACATGCACTTGCGTTTCTACCGTTCTCCTAATGAGCAGCGACATATCGTACGCATCCTCTTCATCGTGCCCATCTATGCCTTTGACTCGTGGCTCAGCCTGCTTTTCTTCACTAATGATCAGTACTACGTCTACTTTGACACAGTGAGGGACTGCTATGAAGCATTTGTGATCTATAACTTCCTGAGCCTTTGTTACGAGTATCTGGGAGGTGAAAGTGCCATCATGGCAGAGATCAGAGGGAAGCCTATTGAGTCCAGCTGTATATATGGGACTTGCTGTCTCTGGGGCAAGACGTATTCCATTGGCTTCCTCAGATTCTGCAAACAGGCCACGCTACAATTCTGTGTGGTGAAACCTCTGATGGCTGCGATCACCGTCATCCTGCAGGCCTTTGGGAAGTATCGTGATGGAGACTTCAATGTGGCCAGTGGTTACCTCTATGTGACCATCATCTACAACATCTCAGTCAGTCTGTCGCTCTACGCTCTCTTCCTCTTCTACTTCGCTACCCGAGACCTGCTAAGCCCCTACAGCCCCATGCTGAAGTTCTTAATGGTCAAATCGGTCATCTTCCTCTCCTTCTGGCAGGGTATGCTGCTGGCTATCCTGGAGAAGTGTGGTGCCATTCCTCAGATCAGCTCTGCAGAGGTGTCTGTTGGCGAGGGCACTGTGGCGGCAGGCTATCAGAACTTCATCATCTGCATTGAGATGTTCTTTGCTGCTCTGGCACTGCGCCATGCCTTCACATTTACAGTCTACATGGACAAGAGGCTGGACTCTCAGGGCCCTGTTCCAATATATGGACAGTACGGGCGATCGGCCCCCATGAAAAGCATCTCCAGCAGCCTGAAGGAGACCATGAACCCTGGGGACATGGTGCAGGACGCCATCCACAACTTCTCCCCAGCCTATCAGCAATACACCCAGCAGTCCACTCTGGAACAGGGCACCACAGCACCACCGGTCTCTCGCAGTCACAGCTGCGTCAGCGCCAGGGACAATGAGAAAACCCTGCTGCTCAGCTCAGACGATGAGTTTTAACTCAGTACAGTAGTCTCCTTCTTCAGTGTCCCAGTCCACGTAGAGGTGCTCTTTTTCACGATGTCTCTAGGAACAGGTTCTGCAGTGGCTTCATGTACTGATGGTGTGAGTACAGCTGATTTCTCTTAGGgacacatcatcatcattacagGACCATATGGCAACTAAACAATCCAAGGATTTATATGTTTAAAGCTGGTAGAAGAGTATTAGGATTACTGCTGCTTATTGTTTCATTATTACTCATGATGAAACAACAAAGACTTTAGTGAACGCCTTTTGGTACGCAATGGTCTGCCTTGCTTGCTtcgagaaataataaaaaaatatttaaagtgtttagaaCCTGATCACAGTTAAGTTTCAGTAGTTAAGCGACTGTATTTAGACAGTTTAAGAAGTGGTCATGAGCATTTGAGCACATTTATACTTGAAATGAGGTGACTTTGGGTGGGTTTTCCAGGTTGtgagaataaaaaagtaatttttgaaCTCCAGGAATGTTGCTAACTGTTAAATAcgtgtaggcctgtcacaataactccAAAAAAGGATTgggataaacaatattattgtctttTTAAGACAGTTATGCCTCTGGCATAATGATAATGCAATTACACTCTTTCATAGAGCAATTCACTTTTGATATTTAAGGATATTAAGTCATTGCATTTAGATTAAATATAGGTTTTGGCATATAAGAGGTTGGTATACTGGCTCATGCACATAAACATTTCACATAGAAACTCTTTACATGtattatataaacataatagaaaatacatttataacatgtttataacATTATCATTGTGATGGGCCTAaacatgttgttgttgttttttttttttcttttaatttatttttaatattttttgaagaGGAGGATTTGCCTCTGATGTTTTCCAAGTTGAAGCTCCGCCCTGCATAAGATTGACAgctttgttttacagtgttccCAGACGTGGTGTAAAGGGACAGAGCGAGGGAATGTGCTGATCTGTGGCAGCTGTCTGGAGTACATTGTTGTcattctttttgtgtttttttttgttttgtttttttccgaTTGATGCACAGGGAGCCGAGTAGAGGAGCAGTTGATGGGACTTGATGAGATTACAGATTAAGAGAAATCTGCTCTTGGCTTGGCTGAAGGGGGCGAGTGCTCAGCAGACTGGATTATAAGGGCGTAATTGGGGCGTTATTTTGCGCCGTGGAGATTAGCACAGGCTTTCGTCAATATGTCAGACAGGAGACCACTGCAGTAAAACCCACTATCTGGGTTAGCTGCGTGGGTGAAATAAAATCTAGGTTATAGATGCGCGTGGAGTGGTCAGGGGCGTACTTAATGCTGCTAATATTCAAAGCAGAATCGTCAACAAAGACCCAGATGTTTCACAGTGAGgtgaaacatataaaacatataagatGATGCTGTAAAAAATtctttgttttatagttttgtctttgtatttttttgcttttacgttTTAATGCTTATTAAGGCAGCAGGTATgttataaatttaattattataaatgaatagGTTTACAATAGGTTCTTTAGGCTTGTTGTTTCTTGATAGCCAATAGAGGGCAGCATCTTGTACGTTTACGTCATTCACATGGGGACAGCTCCACCTTATCTCAGAAGGACACAGCAGCTGCTGCGTGTGTTTCAGTGGGAGGCTCACATTGATATTTCCTTCATGTTCGCTGTCGTTTTCTCTTTGATAGCACTAGAGCCTTACTGACTAGTCAGGGTCTGACCTGTGGGCTTTGATAGGTCTTTAGTATATCTAGTATATCAGGCAGCTTTGGAGTATTTAGTGCAATAGAGGCCAGTATACATGATCTAGCTGCATCAGCAGGCAAGTACAAACATTTATGGTACCtgcttttagttttagtttttggcgtgtgattatatatatttttatgactatttttgcaaatatttatCACTAGTGCACTAAAGGGGCTATTCTCCACATTCAGAAAATAGTGTCAggcctttttttgttgtttttcctttaaaaagatAAGAAAGCTAATCCCTCATTTATTCTGAACAGTttttagagagtgagagaaacacAATGTTCACACTACAGAATATAATAAAGACAATTAGGGGTGTACTCTCACTATGTTGGCTTGTTTTGTACCATGCCCGGGCACAAGTGCTtgggcttaatccctgtcttgTAAAACTGCCTCAatatgcctgtttttttttttttttatcaacaacaataatataataataattcattgtgCCTAATTTGaaactgcaaaacaaacaaTTGCAGTATACCTTGGCTCCTACTAATAATCATCTTCTTTGGTTAAATTATTAATGGATAAACACCACAACCGGATTATTTACAAAGCCCTGTCCCCtccttattttacttttttctctctttctatgaaAATATGATGCAAGTCTTCTTAAATTAATACACATGCACAGATTTGGCGGACAGTGCagactgtatttattttgtggTTTATTTGGAGTCTATTATGAAACGGCGGCATGGTTGGTGACGATGACAGTAGATTCATACCGTTCCAAAGTCCAACCCAACTGTTCTTGGCCCACATCTGTAAGCAGGCCTGGGCAAAGTTTACTCTACTGAGCTCACTCTAGCGAAACAAACTGGGCTTTTGATTGGGAGCCTGCTCGCTCATGGTACGTAATTCATAGTGTGAGTAAACCCATAGAGACAGCATTAAAAGATGGGGATCAAGTAAATgctaaattgttatttttacattttttaaaaagctgttgtATATTTTTCCTTCAAAGATTGTGCTTCTATTTTTCCTTGTGATGTTGCAACAAAGCTCTAGAACAATAAACAAGAATTTTGTCTGTA
>XM_007251251.3
gttcagttatAATCCTCTCAGTGTCTGTCGGGCTGCGCTGTGTTGCTGCTGGTGAAGCGGCTGCTGGGAGAGTAGAGTTACTTACAGACGGGAAGTTTCTCCGGTTTTTCTACGGGACTTTCTGAGGGTAGAGCGGGTCTGAGCTTCTCTGAGAGGACGCTGTTTTTCCTAATGGCGGAGAGGAAAGCTGCTGTAAATCCTACGCTGCTCGGAGAAAGGAGGGTAAATAAACCCGCGGCCATGACGGAGAGGATTTAGGGCCCGAGCCGCTtcgtctgctgctgctgctgctgtccccTTCCTCCAGAGCCGCTGCGCCGCTTTCTTCACACACAGCGTTACTGAGCCTGATGTACCGGCTGTGGAGACGTGACGTACCGTTGCCAGAACGCTTTGGGGAAGACTCAGTGGCCGCGATGGCTCCAGGATCTCCAGCCACGGCGGCCCCTGCTGGCCCAAACATTTCCTGGCTGCCCGAGGTTCCACTGCTCACCCCCGAGCGCCCCATCTTCATCATGACCACCACGGCTCAGGCTCTTGCTGGATTCTTCGTGTGGACGGCTCTGCTGCTCACCTGCCACCAGaTCTACATGCACTTGCGTTTCTACCGTTCTCCTAATGAGCAGCGACATATCGTACGCATCCTCTTCATCGTGCCCATCTATGCCTTTGACTCGTGGCTCAGCCTGCTTTTCTTCACTAATGATCAGTACTACGTCTACTTTGACACAGTGAGGGACTGCTATGAAGCATTTGTGATCTATAACTTCCTGAGCCTTTGTTACGAGTATCTGGGAGGTGAAAGTGCCATCATGGCAGAGATCAGAGGGAAGCCTATTGAGTCCAGCTGTATATATGGGACTTGCTGTCTCTGGGGCAAGACGTATTCCATTGGCTTCCTCAGATTCTGCAAACAGGCCACGCTACAATTCTGTGTGGTGAAACCTCTGATGGCTGCGATCACCGTCATCCTGCAGGCCTTTGGGAAGTATCGTGATGGAGACTTCAATGTGGCCAGTGGTTACCTCTATGTGACCATCATCTACAACATCTCAGTCAGTCTGTCGCTCTACGCTCTCTTCCTCTTCTACTTCGCTACCCGAGACCTGCTAAGCCCCTACAGCCCCATGCTGAAGTTCTTAATGGTCAAATCGGTCATCTTCCTCTCCTTCTGGCAGGGTATGCTGCTGGCTATCCTGGAGAAGTGTGGTGCCATTCCTCAGATCAGCTCTGCAGAGGTGTCTGTTGGCGAGGGCACTGTGGCGGCAGGCTATCAGAACTTCATCATCTGCATTGAGATGTTCTTTGCTGCTCTGGCACTGCGCCATGCCTTCACATTTACAGTCTACATGGACAAGAGGCTGGACTCTCAGGGGCGATCGGCCCCCATGAAAAGCATCTCCAGCAGCCTGAAGGAGACCATGAACCCTGGGGACATGGTGCAGGACGCCATCCACAACTTCTCCCCAGCCTATCAGCAATACACCCAGCAGTCCACTCTGGAACAGGGCACCACAGCACCACCGGTCTCTCGCAGTCACAGCTGCGTCAGCGCCAGGGACAATGAGAAAACCCTGCTGCTCAGCTCAGACGATGAGTTTTAACTCAGTACAGTAGTCTCCTTCTTCAGTGTCCCAGTCCACGTAGAGGTGCTCTTTTTCACGATGTCTCTAGGAACAGGTTCTGCAGTGGCTTCATGTACTGATGGTGTGAGTACAGCTGATTTCTCTTAGGgacacatcatcatcattacagGACCATATGGCAACTAAACAATCCAAGGATTTATATGTTTAAAGCTGGTAGAAGAGTATTAGGATTACTGCTGCTTATTGTTTCATTATTACTCATGATGAAACAACAAAGACTTTAGTGAACGCCTTTTGGTACGCAATGGTCTGCCTTGCTTGCTtcgagaaataataaaaaaatatttaaagtgtttagaaCCTGATCACAGTTAAGTTTCAGTAGTTAAGCGACTGTATTTAGACAGTTTAAGAAGTGGTCATGAGCATTTGAGCACATTTATACTTGAAATGAGGTGACTTTGGGTGGGTTTTCCAGGTTGtgagaataaaaaagtaatttttgaaCTCCAGGAATGTTGCTAACTGTTAAATAcgtgtaggcctgtcacaataactccAAAAAAGGATTgggataaacaatattattgtctttTTAAGACAGTTATGCCTCTGGCATAATGATAATGCAATTACACTCTTTCATAGAGCAATTCACTTTTGATATTTAAGGATATTAAGTCATTGCATTTAGATTAAATATAGGTTTTGGCATATAAGAGGTTGGTATACTGGCTCATGCACATAAACATTTCACATAGAAACTCTTTACATGtattatataaacataatagaaaatacatttataacatgtttataacATTATCATTGTGATGGGCCTAaacatgttgttgttgttttttttttttcttttaatttatttttaatattttttgaagaGGAGGATTTGCCTCTGATGTTTTCCAAGTTGAAGCTCCGCCCTGCATAAGATTGACAgctttgttttacagtgttccCAGACGTGGTGTAAAGGGACAGAGCGAGGGAATGTGCTGATCTGTGGCAGCTGTCTGGAGTACATTGTTGTcattctttttgtgtttttttttgttttgtttttttccgaTTGATGCACAGGGAGCCGAGTAGAGGAGCAGTTGATGGGACTTGATGAGATTACAGATTAAGAGAAATCTGCTCTTGGCTTGGCTGAAGGGGGCGAGTGCTCAGCAGACTGGATTATAAGGGCGTAATTGGGGCGTTATTTTGCGCCGTGGAGATTAGCACAGGCTTTCGTCAATATGTCAGACAGGAGACCACTGCAGTAAAACCCACTATCTGGGTTAGCTGCGTGGGTGAAATAAAATCTAGGTTATAGATGCGCGTGGAGTGGTCAGGGGCGTACTTAATGCTGCTAATATTCAAAGCAGAATCGTCAACAAAGACCCAGATGTTTCACAGTGAGgtgaaacatataaaacatataagatGATGCTGTAAAAAATtctttgttttatagttttgtctttgtatttttttgcttttacgttTTAATGCTTATTAAGGCAGCAGGTATgttataaatttaattattataaatgaatagGTTTACAATAGGTTCTTTAGGCTTGTTGTTTCTTGATAGCCAATAGAGGGCAGCATCTTGTACGTTTACGTCATTCACATGGGGACAGCTCCACCTTATCTCAGAAGGACACAGCAGCTGCTGCGTGTGTTTCAGTGGGAGGCTCACATTGATATTTCCTTCATGTTCGCTGTCGTTTTCTCTTTGATAGCACTAGAGCCTTACTGACTAGTCAGGGTCTGACCTGTGGGCTTTGATAGGTCTTTAGTATATCTAGTATATCAGGCAGCTTTGGAGTATTTAGTGCAATAGAGGCCAGTATACATGATCTAGCTGCATCAGCAGGCAAGTACAAACATTTATGGTACCtgcttttagttttagtttttggcgtgtgattatatatatttttatgactatttttgcaaatatttatCACTAGTGCACTAAAGGGGCTATTCTCCACATTCAGAAAATAGTGTCAggcctttttttgttgtttttcctttaaaaagatAAGAAAGCTAATCCCTCATTTATTCTGAACAGTttttagagagtgagagaaacacAATGTTCACACTACAGAATATAATAAAGACAATTAGGGGTGTACTCTCACTATGTTGGCTTGTTTTGTACCATGCCCGGGCACAAGTGCTtgggcttaatccctgtcttgTAAAACTGCCTCAatatgcctgtttttttttttttttatcaacaacaataatataataataattcattgtgCCTAATTTGaaactgcaaaacaaacaaTTGCAGTATACCTTGGCTCCTACTAATAATCATCTTCTTTGGTTAAATTATTAATGGATAAACACCACAACCGGATTATTTACAAAGCCCTGTCCCCtccttattttacttttttctctctttctatgaaAATATGATGCAAGTCTTCTTAAATTAATACACATGCACAGATTTGGCGGACAGTGCagactgtatttattttgtggTTTATTTGGAGTCTATTATGAAACGGCGGCATGGTTGGTGACGATGACAGTAGATTCATACCGTTCCAAAGTCCAACCCAACTGTTCTTGGCCCACATCTGTAAGCAGGCCTGGGCAAAGTTTACTCTACTGAGCTCACTCTAGCGAAACAAACTGGGCTTTTGATTGGGAGCCTGCTCGCTCATGGTACGTAATTCATAGTGTGAGTAAACCCATAGAGACAGCATTAAAAGATGGGGATCAAGTAAATgctaaattgttatttttacattttttaaaaagctgttgtATATTTTTCCTTCAAAGATTGTGCTTCTATTTTTCCTTGTGATGTTGCAACAAAGCTCTAGAACAATAAACAAGAATTTTGTCTGTA

Function

symbol description
tmem184ba Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM184B (transmembrane protein 184B).
tmem184b Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 184B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251250.3 True 4524 mRNA 0.43 10 17358723 17374122
XM_007251251.3 False 4497 mRNA 0.43 9 17358723 17374122

Neighbor

gene id symbol gene type direction distance location
LOC103024972 csnk1e,LOC103024972,LOC108431980,LOC107584103,LOC108273445,LOC107690058,LOC107731422 coding upstream 130 17343937 ~ 17358593 (+)
LOC103027934 pdap1a,LOC103027934,LOC106609414,LOC106589537,LOC105025093,LOC107554049,LOC107734239,LOC107690063 coding upstream 111210 17241694 ~ 17247513 (+)
slc16a8 slc16a8,LOC107197668 coding upstream 118091 17237424 ~ 17240632 (+)
LOC103030465 kctd17,kcd17,LOC107734225,LOC107584096,LOC107692061,LOC103382075,LOC101463851,LOC105025089 coding upstream 209375 17132606 ~ 17149348 (+)
LOC103032149 NA coding upstream 227010 17123605 ~ 17131713 (+)
tomm22 tomm22,LOC107554024,LOC107584213,LOC107692102 coding downstream 11772 17385894 ~ 17390425 (+)
dmc1 dmc1 coding downstream 17608 17391730 ~ 17396057 (+)
LOC103022777 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding downstream 23031 17397153 ~ 17409934 (+)
LOC111188179 NA coding downstream 49563 17423685 ~ 17424194 (+)
tmem101 tmem101,LOC107708986,LOC107693682 coding downstream 109797 17483919 ~ 17491064 (+)
G37001 NA non-coding upstream 134316 17224041 ~ 17224407 (+)
G37000 NA non-coding upstream 135023 17223335 ~ 17223700 (+)
G36998 NA non-coding upstream 135848 17222400 ~ 17222875 (+)
G36983 NA non-coding upstream 186098 17172425 ~ 17172625 (+)
G36982 NA non-coding upstream 188867 17169351 ~ 17169856 (+)
G37055 NA non-coding downstream 93835 17467957 ~ 17468321 (+)
G37056 NA non-coding downstream 94358 17468480 ~ 17468772 (+)
G37058 NA non-coding downstream 96202 17470324 ~ 17470774 (+)
G37060 NA non-coding downstream 101296 17475418 ~ 17475771 (+)
G37066 NA non-coding downstream 135295 17509417 ~ 17509619 (+)
tnrc6b tnrc6b other upstream 17831 17297479 ~ 17340892 (+)
LOC103027613 cdc42ep1,LOC106609444,LOC105025094,LOC106589540,LOC107734237,LOC107584101,LOC107690062 other upstream 76492 17250981 ~ 17282231 (+)
cby1 cby1 other upstream 124164 17232820 ~ 17234559 (+)
phf5a phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 other upstream 153690 17201497 ~ 17205033 (+)
sun1 NA other upstream 317766 17000382 ~ 17040957 (+)
LOC103045739 LOC103045739 other downstream 331557 17705679 ~ 17708597 (+)
G37098 NA other downstream 341007 17715129 ~ 17715992 (+)
G37099 NA other downstream 344109 17718231 ~ 17719376 (+)
G37131 taok2,LOC108425925,LOC108273910 other downstream 483795 17857917 ~ 17863066 (+)
G37152 LOC108425993 other downstream 578458 17952580 ~ 17960304 (+)

Expression


Co-expression Network