Gene
RNA
| Item | Value |
|---|---|
| gene id | G52409 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 2563762 ~ 2566564 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59705 | True | 898 | lncRNA | 0.42 | 5 | 2563762 | 2566564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_02403219_02417215 | FAM160A2 | coding | downstream | 146547 | 2403156 ~ 2417215 (-) |
| CI01000009_02391182_02393863 | NA | coding | downstream | 169899 | 2390445 ~ 2393863 (-) |
| CI01000009_02358636_02361913 | HPX | coding | downstream | 201813 | 2358470 ~ 2361949 (-) |
| CI01000009_02352214_02356619 | NA | coding | downstream | 206921 | 2352214 ~ 2356841 (-) |
| CI01000009_02327693_02335035 | NA | coding | downstream | 228727 | 2327693 ~ 2335035 (-) |
| CI01000009_02591882_02593586 | RPL8.S, RPL8 | coding | upstream | 25299 | 2591863 ~ 2593761 (-) |
| CI01000009_02610459_02610721 | NA | coding | upstream | 43696 | 2610260 ~ 2610721 (-) |
| CI01000009_02654102_02655554 | CASK | coding | upstream | 87538 | 2654102 ~ 2656438 (-) |
| CI01000009_02682050_02707583 | NA | coding | upstream | 115044 | 2681608 ~ 2707623 (-) |
| CI01000009_02786421_02791586 | NA | coding | upstream | 219747 | 2786311 ~ 2792435 (-) |
| G52440 | NA | non-coding | downstream | 50091 | 2512957 ~ 2513671 (-) |
| G52379 | NA | non-coding | downstream | 112122 | 2448366 ~ 2451640 (-) |
| G52378 | NA | non-coding | downstream | 135914 | 2427249 ~ 2427848 (-) |
| G52330 | NA | non-coding | downstream | 162382 | 2401035 ~ 2401380 (-) |
| G52328 | NA | non-coding | downstream | 162868 | 2399814 ~ 2400894 (-) |
| G52406 | NA | non-coding | upstream | 7922 | 2574486 ~ 2578978 (-) |
| G52469 | NA | non-coding | upstream | 244481 | 2811045 ~ 2811334 (-) |
| G52478 | NA | non-coding | upstream | 256398 | 2822962 ~ 2823928 (-) |
| G52488 | NA | non-coding | upstream | 345741 | 2912305 ~ 2912542 (-) |
| G52489 | NA | non-coding | upstream | 346554 | 2913118 ~ 2913345 (-) |
| G52410 | NA | other | downstream | 1229 | 2551724 ~ 2562533 (-) |
| G52098 | NA | other | downstream | 1156135 | 1401932 ~ 1407627 (-) |
| CI01000009_02885473_02893975 | NA | other | upstream | 317124 | 2883688 ~ 2893975 (-) |
| CI01000009_03261739_03262843 | NA | other | upstream | 694639 | 3261038 ~ 3262843 (-) |
| G52828 | NA | other | upstream | 1650856 | 4217420 ~ 4231469 (-) |
| G53515 | NA | other | upstream | 2935831 | 5502395 ~ 5505248 (-) |
| G55814 | NA | other | upstream | 5859257 | 8425821 ~ 8428012 (-) |
