LOC103022929 (slc16a6,LOC108444260)


Basic Information

Item Value
gene id LOC103022929
gene name slc16a6,LOC108444260
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 2056100 ~ 2066246 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259095.2
CACATGTAGTCCTGGCAGAGAACACACTGCAGTGTCAGGCAGAGGACCAATAGAGCTTTCCCTTCCAAAAACCGGTGAGAACAGATTTCGCTCAGAAATAATGGCTCTGTGGATCTTCAGAAAAGATGGTTGCCTGGGGCCTAAAGTCTATTCCGAGGTCCCAGATGGAGGCTGGGGTTGGATCGTAGCTGTGGCCTTTTTCCTTGTTGAGGTCTTCACCTACGGGGTCATAAAAAGCTTTGGCATTTTCCTCAAGGATCTGATGTGCGAGTTTAATGAGAGCAACAGCCGAGTTTCGTGGATCGTCTCAATATGCGTGTTTGTAATGGCTTTCACAGCCCCGCTCTCAACTGTGCTGAGTAATCGGTTTGGCTTCCAGCCTGTGGTGATACTTGGAGGACTCCTCATTTCCATTGGAACAATCTCCACTGCGTTCACCAGCCACATCACTCAGATTTACATCACTATCGGGATAGTTGCTGGTTTGGGCTACTGCTTAACATTTCTCCCCACTGTCACAATCCTGTCCCAGTACTTCAGTAAACGCCGCTCCCTGGTGACTGCCATGGCCTCCACCGGAGAATCCTTTGCCATATTTGCTTTTGCTCCTGCATTTACAGCCCTGAAGGCAAACATTGGCTGGAGACACACAATGGTGGTGCTTGGATTATTACAGGGAATAATCGTTGTTTGTGGACTTCTGCTCCGCCCTTTGGTCATAAAGCCAAAGACGAATACTGAGAGTTTCACCCAACCTCTGAAATCCAGAAAGCAGGAGGTCATCAACTCTCTCCCTGAATCTGAACTTCGTGGCTCTTTAAGCTCTGGAGACTCGGGTGTACAGTCACTGGAAATGCCGGAACAGAGTTCTCCAGTGGGAGCACAGCAAAAAGAAGAGGAACATCTTCAGATTCCTCAAACCCAACCAGACAAAGAGGCAGAGCCAGGCAGAGGCAAACTCCTGGACCTCACGGTACTAAAGGAAGGCAGCTTTGTGTGCTATGCTGCTTTTGGCTTGTTTGCAACACTTGGATTCTTCGCCCCACAGCTCTACATGGTGGAGCTGAGTGTCAGCTTGGGCACTGAAAGAGACAAGGCGGCCTACATGCTGTCGATAATGGCCGTGGCGGAGATCTTTGGCCGTCTCTCCATCGGCTGGGTCCTGAACTGGGGGCGCATTAGGAAGATATTTATATTGCTTGGGTGTGTGACACTGATGTGTGTGGTCCTTGTGTTCTTCACGGTGGTCGATGGTTTCTGGGGGCTGGCAGTCTGCTGTGTGCTCTATGGCTTCCTGCTGGGCAACATCGCGTCCACACACATCCCCATGCTGGCAGAGGATGATGTGGTGGGCATCAAGAGAATGCCCTTAGCGGTAGGAGTTTACGTCTGCATTCAAAGTTTTGCAGGGCTTGCTGGACCACCTTTAGGAGGTGTTTTGGTGGACATTACTCAGAATTACAGCTCAGCCTTCTACTCTTGTGCTGTGGGAATGGGGTTAGGTGCACTCTTCCTAGGGCTGGTACATCCAGCGAAGACAGGTTGTCTGTGCACAAAGAAGTGCCTCAGCCCTTGCCAGGACATCCCTGCAGTCGAGCATGTGAGTGAGGATAAAGTTATGCCTGAGGAATTTCTAGAAGTGGACATTTTACCAAATCCTCAAGGTCAATCCTGAAAAAGCAGTCCCCTTTAACCTAAGAAACGATGAAATCTGTGATTGATTGATCACAGAACAGCTTTAAACTAGATGCTATTGTGAGGCTGAGTCACTTTATTCCTAAAACAAATAGAGATTTACAGTGTAGAGCttgtttttttactcttttctcaCACGGGTCACTTTACCCATCACAAGTTGCCTTAAAGAAGGGAGGAGGTTTTGGACGATGTCAGCGGCAGATGTCAGGACCACTGGCTTTTCACATTGAGAATGTAGTAATTTTACATCAGTTCATTTTAGCACTGATTTAGTCAATTACAATAAAGTGCCCTGACTGATATTAGCTTTAAAAAACTTGCAAAACTGGCTGATTGTGgaccatattttaatggattatGTGTCTGCTATTTTAAGCCTGATccagttttgatgcttttatttactgttctaGGAAACTAGAAATCTAACACACTATACATGATTATTTTAAGAAGTTGGCTACCAAACAGAATATATCGCCAAACCACCGATCGAGGACAGGTCTAATTATAATCAGGGTGGCTGTGGTATCACAAATCTTGCTATGTTCAAGCTGCAGGCAAATCGGATTTGTTCCTTAAGTCAGATCTGTTGAAAACGACTGTCTGCACTGTTACTCGAGAGTGACCAGATTGGATTTGCGTGTCCAGACATTACAAAcctgtatctgtatgggttgctaaGGTATCTCAGTCTGCATCTAAAACTAATGGTTGGTGTTAGGTGTTGGACCTTGCACTTTCTTCAATCTggatttttagtgtttttgtcaCAAATTATGCAAACGACACAAAGAAATCCAATTAGTGTCCATAGACAGAGACACATCTgattgcaaataaataaattgcaaaTAAATCAGATTGCAATCATATTTCAAACCACCTGCAAATGTGGTTTGGATTTAATTTGTATACATTTGTTTCTGTTCGTATTTACTAAAATCAATATAGATACAAtctacatatgacaaaaatctgatttagtcTAGCAGTCTGTACATAGCCTTGAACAGCTACACCACCTGGGAGCCGCCGTGATTTTTTCAAAGGTTTTATAGTTagaaacacaacaaacaacattatagtaaatacataaaatgcaaATACTAATGGAACAGAACTATGAACTACTAGATCATACTACACTGGGTTCTCTTAACtcttttatttccttattttgggattttactgaataaatttaaaaaaaactacagtacaCTGGAAAAGAAGACACAgaaaactatattttaaatcactggatttttattttatacttcaGATAAATGTACATAAAGAATGTTTCGTAAACGGTTTAGTGATTAATTTACTGCTAAGAAAATTTAACAATGAAAACCAGCTTGATATACAATGCAGCATTCATTTTATGTAAACATTTTGGaccaattattttaattttattgttttcaagACACTGACTATTTATTTACTGCTTGTAAATCTTTAAATCATCATATTGGTAAACGCATGAAAGTGCTTTCATGTTGAGAAATTCTCAATGTAAGGcattatatgatatgatattaaaattatataatgttttaGTGTAAAGAGATTTTAAGAATGTGCTTTAGACAAACGTTATCATAAAATAATGTCTCAGGCTTTAGGAAACTTTAGGAAAGTGGAGAAGCTTTAAGAAGGCATTTTACCTTAAGGATCATGTGTTCCTATTACTGTACAGAAAATCACGAGTGTCAGTGAGTGAATTTGCATATTAAGTATTAAATTATGCAGAATATACTGTATGACAAATCAGTGGAACATACTGTGAAAATGTCAATATACTGTGAATATTTCTTTACATATTAAGTGTCAGAATGTGAATGAAAAACTTACCAGAATGTAATCAAAAGAATGAGATGGTCAGTCTAAGttaaagcatttacaataaCTGTGAAGTGAAGGTCAACATTTTCAGCAGGTTAATTCTCATTTTTATAATTCTCATATTATTCTGGGCATTATTATTTGACTTGAATTTTGTATGTAtagaaacaaactttttttgtgattttgtcTGTAAGagcaatcacttttttttacacacacaatcatttttatctaaaataaaataacttaagtcATTTT
>XM_022668896.1
cccaaaagagcccatggtGATGTTTGTGTCACAGGCCctctaaaagaaatATTTCGCTCAGAAATAATGGCTCTGTGGATCTTCAGAAAAGATGGTTGCCTGGGGCCTAAAGTCTATTCCGAGGTCCCAGATGGAGGCTGGGGTTGGATCGTAGCTGTGGCCTTTTTCCTTGTTGAGGTCTTCACCTACGGGGTCATAAAAAGCTTTGGCATTTTCCTCAAGGATCTGATGTGCGAGTTTAATGAGAGCAACAGCCGAGTTTCGTGGATCGTCTCAATATGCGTGTTTGTAATGGCTTTCACAGCCCCGCTCTCAACTGTGCTGAGTAATCGGTTTGGCTTCCAGCCTGTGGTGATACTTGGAGGACTCCTCATTTCCATTGGAACAATCTCCACTGCGTTCACCAGCCACATCACTCAGATTTACATCACTATCGGGATAGTTGCTGGTTTGGGCTACTGCTTAACATTTCTCCCCACTGTCACAATCCTGTCCCAGTACTTCAGTAAACGCCGCTCCCTGGTGACTGCCATGGCCTCCACCGGAGAATCCTTTGCCATATTTGCTTTTGCTCCTGCATTTACAGCCCTGAAGGCAAACATTGGCTGGAGACACACAATGGTGGTGCTTGGATTATTACAGGGAATAATCGTTGTTTGTGGACTTCTGCTCCGCCCTTTGGTCATAAAGCCAAAGACGAATACTGAGAGTTTCACCCAACCTCTGAAATCCAGAAAGCAGGAGGTCATCAACTCTCTCCCTGAATCTGAACTTCGTGGCTCTTTAAGCTCTGGAGACTCGGGTGTACAGTCACTGGAAATGCCGGAACAGAGTTCTCCAGTGGGAGCACAGCAAAAAGAAGAGGAACATCTTCAGATTCCTCAAACCCAACCAGACAAAGAGGCAGAGCCAGGCAGAGGCAAACTCCTGGACCTCACGGTACTAAAGGAAGGCAGCTTTGTGTGCTATGCTGCTTTTGGCTTGTTTGCAACACTTGGATTCTTCGCCCCACAGCTCTACATGGTGGAGCTGAGTGTCAGCTTGGGCACTGAAAGAGACAAGGCGGCCTACATGCTGTCGATAATGGCCGTGGCGGAGATCTTTGGCCGTCTCTCCATCGGCTGGGTCCTGAACTGGGGGCGCATTAGGAAGATATTTATATTGCTTGGGTGTGTGACACTGATGTGTGTGGTCCTTGTGTTCTTCACGGTGGTCGATGGTTTCTGGGGGCTGGCAGTCTGCTGTGTGCTCTATGGCTTCCTGCTGGGCAACATCGCGTCCACACACATCCCCATGCTGGCAGAGGATGATGTGGTGGGCATCAAGAGAATGCCCTTAGCGGTAGGAGTTTACGTCTGCATTCAAAGTTTTGCAGGGCTTGCTGGACCACCTTTAGGAGGTGTTTTGGTGGACATTACTCAGAATTACAGCTCAGCCTTCTACTCTTGTGCTGTGGGAATGGGGTTAGGTGCACTCTTCCTAGGGCTGGTACATCCAGCGAAGACAGGTTGTCTGTGCACAAAGAAGTGCCTCAGCCCTTGCCAGGACATCCCTGCAGTCGAGCATGTGAGTGAGGATAAAGTTATGCCTGAGGAATTTCTAGAAGTGGACATTTTACCAAATCCTCAAGGTCAATCCTGAAAAAGCAGTCCCCTTTAACCTAAGAAACGATGAAATCTGTGATTGATTGATCACAGAACAGCTTTAAACTAGATGCTATTGTGAGGCTGAGTCACTTTATTCCTAAAACAAATAGAGATTTACAGTGTAGAGCttgtttttttactcttttctcaCACGGGTCACTTTACCCATCACAAGTTGCCTTAAAGAAGGGAGGAGGTTTTGGACGATGTCAGCGGCAGATGTCAGGACCACTGGCTTTTCACATTGAGAATGTAGTAATTTTACATCAGTTCATTTTAGCACTGATTTAGTCAATTACAATAAAGTGCCCTGACTGATATTAGCTTTAAAAAACTTGCAAAACTGGCTGATTGTGgaccatattttaatggattatGTGTCTGCTATTTTAAGCCTGATccagttttgatgcttttatttactgttctaGGAAACTAGAAATCTAACACACTATACATGATTATTTTAAGAAGTTGGCTACCAAACAGAATATATCGCCAAACCACCGATCGAGGACAGGTCTAATTATAATCAGGGTGGCTGTGGTATCACAAATCTTGCTATGTTCAAGCTGCAGGCAAATCGGATTTGTTCCTTAAGTCAGATCTGTTGAAAACGACTGTCTGCACTGTTACTCGAGAGTGACCAGATTGGATTTGCGTGTCCAGACATTACAAAcctgtatctgtatgggttgctaaGGTATCTCAGTCTGCATCTAAAACTAATGGTTGGTGTTAGGTGTTGGACCTTGCACTTTCTTCAATCTggatttttagtgtttttgtcaCAAATTATGCAAACGACACAAAGAAATCCAATTAGTGTCCATAGACAGAGACACATCTgattgcaaataaataaattgcaaaTAAATCAGATTGCAATCATATTTCAAACCACCTGCAAATGTGGTTTGGATTTAATTTGTATACATTTGTTTCTGTTCGTATTTACTAAAATCAATATAGATACAAtctacatatgacaaaaatctgatttagtcTAGCAGTCTGTACATAGCCTTGAACAGCTACACCACCTGGGAGCCGCCGTGATTTTTTCAAAGGTTTTATAGTTagaaacacaacaaacaacattatagtaaatacataaaatgcaaATACTAATGGAACAGAACTATGAACTACTAGATCATACTACACTGGGTTCTCTTAACtcttttatttccttattttgggattttactgaataaatttaaaaaaaactacagtacaCTGGAAAAGAAGACACAgaaaactatattttaaatcactggatttttattttatacttcaGATAAATGTACATAAAGAATGTTTCGTAAACGGTTTAGTGATTAATTTACTGCTAAGAAAATTTAACAATGAAAACCAGCTTGATATACAATGCAGCATTCATTTTATGTAAACATTTTGGaccaattattttaattttattgttttcaagACACTGACTATTTATTTACTGCTTGTAAATCTTTAAATCATCATATTGGTAAACGCATGAAAGTGCTTTCATGTTGAGAAATTCTCAATGTAAGGcattatatgatatgatattaaaattatataatgttttaGTGTAAAGAGATTTTAAGAATGTGCTTTAGACAAACGTTATCATAAAATAATGTCTCAGGCTTTAGGAAACTTTAGGAAAGTGGAGAAGCTTTAAGAAGGCATTTTACCTTAAGGATCATGTGTTCCTATTACTGTACAGAAAATCACGAGTGTCAGTGAGTGAATTTGCATATTAAGTATTAAATTATGCAGAATATACTGTATGACAAATCAGTGGAACATACTGTGAAAATGTCAATATACTGTGAATATTTCTTTACATATTAAGTGTCAGAATGTGAATGAAAAACTTACCAGAATGTAATCAAAAGAATGAGATGGTCAGTCTAAGttaaagcatttacaataaCTGTGAAGTGAAGGTCAACATTTTCAGCAGGTTAATTCTCATTTTTATAATTCTCATATTATTCTGGGCATTATTATTTGACTTGAATTTTGTATGTAtagaaacaaactttttttgtgattttgtcTGTAAGagcaatcacttttttttacacacacaatcatttttatctaaaataaaataacttaagtcATTTT

Function

symbol description
slc16a6 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: monocarboxylate transporter 7-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0015718 monocarboxylic acid transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008028 monocarboxylic acid transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259095.2 True 3810 mRNA 0.40 6 2056100 2066246
XM_022668896.1 False 3776 mRNA 0.40 6 2056100 2063662

Neighbor

gene id symbol gene type direction distance location
LOC103047336 LOC108444256 coding downstream 38925 1977614 ~ 2017175 (-)
xrcc6 xrcc6,LOC107709651,LOC107554059 coding downstream 151471 1898185 ~ 1904629 (-)
LOC103046112 NA coding downstream 160107 1890271 ~ 1895993 (-)
josd1 josd1,LOC107660868 coding downstream 166821 1879258 ~ 1889279 (-)
cbx7 cbx7,LOC103382143,LOC107554058,LOC107660863,LOC107584093,LOC107709653,LOC106608943 coding downstream 177891 1870610 ~ 1878209 (-)
LOC103023976 snx11,LOC103023976,LOC108444262,LOC105888804 coding upstream 8384 2074630 ~ 2087567 (-)
snf8 snf8,LOC107692042,LOC107734219,LOC107554070 coding upstream 51294 2117540 ~ 2120383 (-)
chmp2a chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding upstream 64772 2131018 ~ 2134043 (-)
psme3 psme3,LOC107582747,LOC107727296,LOC107669474,LOC107706898,LOC107666924 coding upstream 210511 2276757 ~ 2282984 (-)
dhx8 dhx8,LOC107706906 coding upstream 558692 2624938 ~ 2637751 (-)
G33732 NA non-coding downstream 79515 1976329 ~ 1976585 (-)
G33731 NA non-coding downstream 79992 1975829 ~ 1976108 (-)
G33693 LOC108413510,LOC108273944,LOC100698988 non-coding downstream 192588 1862786 ~ 1863512 (-)
G33690 LOC108413510 non-coding downstream 198385 1856968 ~ 1857715 (-)
LOC111192345 NA non-coding downstream 328843 1720811 ~ 1727257 (-)
G33759 NA non-coding upstream 8089 2074335 ~ 2074606 (-)
LOC111192348 NA non-coding upstream 14729 2080975 ~ 2083243 (-)
G33804 LOC108444266 non-coding upstream 62021 2128267 ~ 2130172 (-)
G33833 NA non-coding upstream 125844 2192090 ~ 2192968 (-)
G33835 NA non-coding upstream 128041 2194287 ~ 2194607 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other downstream 13797 2022071 ~ 2042303 (-)
G33675 NA other downstream 243478 1810586 ~ 1812622 (-)
LOC111192416 NA other downstream 1654788 389434 ~ 401312 (-)
G33823 srcap other upstream 102777 2169023 ~ 2177059 (-)
G33836 LOC103393566,LOC105888730 other upstream 128511 2194757 ~ 2196095 (-)
G33904 NA other upstream 237016 2303262 ~ 2309329 (-)
G34046 NA other upstream 1114922 3181168 ~ 3194377 (-)
prr15l prr15l other upstream 1716879 3783125 ~ 3789192 (-)

Expression


Co-expression Network