uts2r (uts2r,LOC108426413,LOC108273405,LOC107754100,LOC107689263,LOC107552777)


Basic Information

Item Value
gene id uts2r
gene name uts2r,LOC108426413,LOC108273405,LOC107754100,LOC107689263,LOC107552777
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 3126382 ~ 3182179 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259142.3
tctctctacccctcacAGGCACACACTCTGTCAGTGGAAGAGAGGATTTCAAAATCCAGCTGTAGCTCAAAGTGCTCGTCTCCTAAGGCATACCCAGCTAAGATGAGTTTTTGGGCTTTTTTCCCCATTTACGTTCTCTCTTTCATGTTTACGACTTCTTTTGAAGACGTAATGCTGTGCTGAGATCTGCCATCAGGAGCTGTGAGGGAGTAGGTGATGTGCTGAAGAAGAGCAGAAGAAGTTTTTAAACAACAGCTGAAGCACCTGCTTGTGACTGATTTGAACGCAGGCGCTCAGACTTCGCATTCTGACACAATGACCGTGTTCCTCTAGAGGGCTCttgctttttttgtgtgtgggcatgtgtgtgagtatgtgtgaatgagtgtgtggagagtgtgagtgtgtgtccgCGTGTTGGTGTGCCTTTGCCTGAACTGGAATCAAACCGTTGGGATCTTTCGAATGGAATTCCGGGACTTTGGAATAACTACCGGGAGAAGTATCATGAGTTCGATCAGTGGGCGCTGAGCTCATTATAAATGTTAAACCACTCTCTGCTGGGAGCCACACAATCTGTGGGAATTCAAGAAGAGATGACCACTGTGTCAGTGGAGTCCCTGATGGCAATGGTGGATCGGATTCCCAATGCCACTGAGACTCCAGTGGAGACATCTGCAGAGGATATGGCCGCCACCTTCACCATTGGCACCATCCTGTCAGTCATGTGCCTCGTGGGCGTGTCAGGAAATATCTACACCCTGGTGGTCATGTGCCACTCCATGCGCGCAGCTGCTTCTATGTACATCTATATTGTCAACCTGGCAATGGCTGACCTGCTCTACCTGCTCACCATTCCCTTCGTGGTGTGCACCCACTTCTTAAAGGGCTGGTACTTTGGTGATATAGGATGTAGGACCCTCATTAGTATGGACTTTCTCACAATGCATGCCAGCATCTTTACACTGACTGTGATGAGCACGGAGCGATACTTTGCGGTTCTTAAGCCCCTGGATACAGTAAAACGATCCAAGAGCTACCGCAAAGCCATCGCTCTCCTTGTATGGACAGCCTCATTGATTCTGACCCTCCCCATGATCATTGACATAGAGCTCAAGATGGAAAATTCCAAGCTGATGTGTCAGACCACGCTGAGCCCTCTGTCTTACAAGATTTACATCTCCTCACTTTTCTGCACCAGCATCGTCGCTCCTGGGGTCATAATCGGCTACCTGTACATATGTCTGGCCCGTGCCTACTGGATCTCGCAGACCGAGACGTTCAAGCAGACTCAGAAGCTGCCAAACCACAAAGTTCTGTACCTCATCTTCACTATCGTTCTCCTCTTCTGGGCCTGCTTTCTGCCTTTTTGGATCTGGCAGCTCCTGGGCCAGTTTAATCCAGAGATGGTCCTGTCCACCAAGGCCAGGCGCAACATCAATTACCTGACCACCTGTCTGACCTACAGCAACAGCTGCATCAATCCCTTCCTCTACACCCTCCTAACCAAGAACTACAAGGAGTACTTGCGGAAGAGGCAGCGGACCTGGATGGCTGGGAGCTATTTCAACCGAAGGAACCGCTTCCAGCGCTCGCCTCGCCGCTCCCTGTCCTCCAGCAGCCAGCAGTGCACAGAGAGCTTCATGCTCACGCACACATCACGCACCAATAACAGCAGTTTGTGAGGGGAAGGAAGAAGAACGGCTGCAGCAGGAAGAGCCTGGAGCTGGCCAAGCTGATTGGCACCCCTTTCCTCAGGAAAGGGAGCGAAAAAagacagaggaagaggagggcaTTAGCCGAAAAGAAAGGACAGAAGTTACGTCAAAAAAATCTTCACCCACCTTCAGATGGATCACCACATCACATCTTCAAAACCTTATATTTTACTCTCTTATAAGTTactctcttaaaaaaatatatatatatatataaataagattCCAAAAAgggttaataatgataatgaaagCACTTgatacaaaaaggaaaaaacactgaTCATTGGGCCACATTGTATCCGGTGCTCACTATTTAGAATCTGTTGAGCACCACTTTGTGTCTGGGAAgcccacatagtatctggtgctcactgcaTAGTATCTGGTGAGCATCATACAGTATGTTGTGAGCCCCACTTTGTTTTAACCTTAACAATTTTACATTATGAAAAAATTCTACctggaaaaaatacacaatgccCCTTTAAGGGCTCCATAAATTGCACAATGCCAAAACACTGAACAAATATTTTTGGGGTTCGCTAGAAGCATCCTTGGTTATGGCTAACTTTAGCTTCCTATAACCAATTACTTAGAGGTATACAATAATACATGACTGTTGCATCATCTCCACCCAACATGCAATGACCTAAATTTTAGGGATGCATGATGATATTGAAATTACATCAGTACATGACGAATATTTCAAACTGGTacttgctgatgtatttattgtgtgcTAGAAAAGGACCAAGCGACACTGGCTGCAGTACCAAAATTGGCCGATACTGGTGGTGCTACTTTAAAAAGCA

Function

symbol description
uts2r Predicted to enable urotensin II receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: urotensin-2 receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0008217 regulation of blood pressure biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001604 urotensin II receptor activity molecular_function

KEGG:

id description
K04241 UTS2R; urotensin 2 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259142.3 True 2533 mRNA 0.47 3 3126382 3182179

Neighbor

gene id symbol gene type direction distance location
cacna1g cacna1g coding upstream 56551 2730484 ~ 3069831 (+)
spata20 spata20 coding upstream 428346 2639255 ~ 2698036 (+)
etv4 etv4,LOC107706904 coding upstream 507011 2574538 ~ 2619371 (+)
meox1 meox1,LOC107577625 coding upstream 609927 2505355 ~ 2516455 (+)
sost LOC108414158 coding upstream 736353 2384374 ~ 2390029 (+)
LOC103043460 LOC108426414,LOC108274136,LOC107754112,LOC107743783,LOC107566616,LOC107691214 coding downstream 140785 3322964 ~ 3342690 (+)
cdk5r1 cdk5r1,LOC108426451,LOC103047129 coding downstream 210129 3392308 ~ 3399142 (+)
tbx21 tbx21 coding downstream 546237 3728416 ~ 3746114 (+)
pnpo pnpo coding downstream 595563 3777742 ~ 3781778 (+)
cdk5rap3 cdk5rap3,LOC107754106 coding downstream 611696 3793875 ~ 3801538 (+)
G33959 NA non-coding upstream 364867 2760908 ~ 2761515 (+)
G33950 dhx8,LOC107706906 non-coding upstream 491360 2628670 ~ 2635022 (+)
LOC111192349 NA non-coding upstream 648895 2395313 ~ 2477487 (+)
G33882 NA non-coding upstream 696180 2429944 ~ 2430202 (+)
G33875 NA non-coding upstream 792297 2333743 ~ 2334085 (+)
G33987 NA non-coding downstream 34825 3217004 ~ 3218342 (+)
G34073 NA non-coding downstream 137535 3319714 ~ 3319922 (+)
G34078 psmd11,LOC108426450,LOC107743775,LOC107568948,LOC103367354,LOC107691212,LOC101174707 non-coding downstream 200809 3382988 ~ 3390577 (+)
G34105 NA non-coding downstream 363274 3545453 ~ 3557491 (+)
G34177 NA non-coding downstream 620800 3802979 ~ 3804577 (+)
amz2 amz2 other upstream 1069419 2050742 ~ 2056963 (+)
LOC111192342 dnah9 other upstream 1738363 1369173 ~ 1388019 (+)
trnal-aag NA other upstream 2133864 992312 ~ 992518 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other upstream 2141001 983167 ~ 985381 (+)
LOC111192417 NA other upstream 2701911 419010 ~ 424471 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 381851 3564030 ~ 3659132 (+)
G34309 NA other downstream 988872 4171051 ~ 4178083 (+)
LOC103025551 sema4g other downstream 1700377 4882556 ~ 4924766 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 2510343 5692522 ~ 5756116 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 3064467 6246646 ~ 6258050 (+)

Expression


Co-expression Network