mrpl10


Basic Information

Item Value
gene id mrpl10
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 3770639 ~ 3776185 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259165.3
taatttttgttggacctggcaaccctggcatAGTCGTTCCGCATCACATCCGGCACAACATGGCAGCGACCTTGTGCAGCAGGATTCTACTAACAAAACCCGGATGTCTGCCTTTGGCTCAGAGTGTCCGCCATGGCTCCAAGGCAGTCACCCGCCATAGAAAGCCTATGCACATTCTGAAGCAGAAGCTGTTGGCTGTTACTGAATACATTCCACCCAAACCGTCTGCTGCACCTGGTGCTTACCCTTCACAGACCAAGAGGATGGAGCAGGAAAGCGGCTTGGTGAGGTTTTTGAAGAAAAAGGTGGAAACTACGTTTGAAGAGTGCAAGATGCTTGTCGTGGTTCAGAACAATGCCACCAATGCTGAAGACATGCTTTTGCTAAGACACAGACTTCATAAACATGATATTGCCATTAAATTTTTCCCCAACCAGGTAATGAGATCCTACCTGCCCAGCAGCCAGTACAGAAACATGCTGCCTCTCTTCATTGGACAAACTGTTATGTTTGTCAGTAAGGAGCCAAAAGTAAAGGAAATGTTGCGAGTGTTGAGGAGTAGCCCACAGATGATACTCTTAGGAGGATGTATAGAGAACACAATGTTATCACGAGAAGGAATACTTAACTACTCCAGACTGCCATCTATAACCACTGTCCAGGGTGAGCTGGTCGGAGGCCTGACCTTAATGACCTCACAGACTGTGTCAATGCTGCAGCGGCACCCTGCCCACCTCTCGGCTCTCCTCCAGCAGTATATCAAACAGAATCAGCCCGGAGGCACCCCAGAGTCTACAGCACCAGAGACCACCCCTAAGACAGAGGGGGCAGCTGTCTGAACATGTTCATGTCACTAGATTGCTCTGTGATGGGTATGATTTGTCCAATGTTTGTTTATAATGTCTATAAGCTTGAAGTGCATTGATTGGACTCTCTGACGAGGACATTAATGCTCTACTGATGTTGCATATACtggtctggaaaaaattaagagactacttcagtttttgaatcagtttctctgatttagctatttatagaataaaacaacaattttcattttactcaaacatatacctataaagtacgaacaacatttcttccaaattctaaataaaaatattgtcatatagagcatttatttgaagaaaatgagaaatggtcaaattgcCAACAAAGGTGCagtgctttcaaacctcaaatcatgcaaagaaaacaagttcatattctaaacttttaagagttcagaaatgaatatttggtagaataaccctgattttgtatcacagttttcatgcatctcggcatgttctcctccaccagtcttacacactgctttaggataactttatgccactcctggtgcaaaaaatcaagcagttcagtttggtttgatggttgtgatcatctaCCTTTctcttgaatatattccagaggatttaatttgttaaaaaaagtcaatttttaagtggtctcctatgtttgtccagagctgtatatgtcttGTATTTATGAACTGATTAGTACAGTGTATGATCAGTGGATTGACATTAAAAAGAAACTTGTAAAAAACATCTGACATTCAGGCTTATTCGTTCTTCCTTTTTTAAGCATTTGGGTGACCacatttacaatacatttattgTAGATGTGAATAACATAAACCAATAAAGTCATATTTAACATCA

Function

NR:

description
39S ribosomal protein L10, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0005840 ribosome cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K02864 RP-L10, MRPL10, rplJ; large subunit ribosomal protein L10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259165.3 True 1688 mRNA 0.41 5 3770639 3776185

Neighbor

gene id symbol gene type direction distance location
LOC103044690 osbpl7 coding downstream 147 3749171 ~ 3770492 (-)
LOC103046317 LOC103046317,LOC108426453,LOC107565668,LOC107754097,LOC107677886,LOC108274275,LOC107743772 coding downstream 215420 3545433 ~ 3555219 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773 coding downstream 238250 3403947 ~ 3532389 (-)
LOC103047433 psmd11,LOC108426450,LOC107743775,LOC107568948,LOC107691212,LOC103367354 coding downstream 380061 3382775 ~ 3390578 (-)
ogfod3 ogfod3,LOC106959269 coding downstream 390040 3340612 ~ 3380599 (-)
LOC103042441 LOC108426417,LOC107677865,LOC108273677 coding upstream 26727 3802912 ~ 3807018 (-)
cbx1 cbx1,cbx1b,LOC107677876 coding upstream 47733 3823918 ~ 3829363 (-)
ccdc189 NA coding upstream 60438 3836623 ~ 3839557 (-)
LOC103039858 LOC108426464 coding upstream 85389 3861574 ~ 3870176 (-)
LOC103038619 NA coding upstream 107829 3884014 ~ 3893365 (-)
G34159 NA non-coding downstream 41679 3728642 ~ 3728960 (-)
G34101 NA non-coding downstream 371526 3391629 ~ 3399113 (-)
LOC111192350 NA non-coding downstream 581203 3107202 ~ 3189436 (-)
G34036 NA non-coding downstream 685233 3060369 ~ 3085406 (-)
G33944 etv4,LOC107743788 non-coding downstream 1167450 2574387 ~ 2603189 (-)
G34166 pnpo non-coding upstream 1715 3777900 ~ 3781741 (-)
G34218 rnf40,LOC108273672,LOC107743762,LOC107677883,LOC107563784,LOC107565773 non-coding upstream 63818 3840003 ~ 3842727 (-)
LOC103038927 NA non-coding upstream 104397 3880582 ~ 3883412 (-)
G34230 NA non-coding upstream 127149 3903334 ~ 3903569 (-)
G34232 NA non-coding upstream 134104 3910289 ~ 3910512 (-)
G34046 NA other downstream 576262 3181168 ~ 3194377 (-)
G33904 NA other downstream 1461310 2303262 ~ 2309329 (-)
G33836 LOC103393566,LOC105888730 other downstream 1574544 2194757 ~ 2196095 (-)
G33823 srcap other downstream 1593580 2169023 ~ 2177059 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other downstream 1728336 2022071 ~ 2042303 (-)
prr15l prr15l other upstream 6940 3783125 ~ 3789192 (-)
G34214 NA other upstream 60436 3836621 ~ 3883469 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other upstream 1195513 4971698 ~ 4995913 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other upstream 1479434 5255619 ~ 5362486 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 2127403 5903588 ~ 5928154 (-)

Expression


Co-expression Network