G51501


Basic Information

Item Value
gene id G51501
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2909572 ~ 2909938 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58676
TCATCACTGAGGTAGACGCATATGATAAAAACACGTTCCTTGTCGATAGGACTGTCAGTCAGCATTTTCCCAACAAATCTCAACACATTGCTCACCAGACCTTGCCTAAAGTTGAGAAAAAAAGCTAATTTATCCCCAAACTTTGATCAGTTAAAAAACTGACTTTTAACTTTTTCTATTCTCAAATCTATGTGCATCCTAACTACAAACAGCTAATGTGAGCATCAGCCACAGCCTGCACGGATGAGCTCATTGGTGACCTGTTTGCTCACCATCTCCATCTTGACAGCCTTATAGACTAAACAGACTAAACTGCATCTGACATACTTGTGCCAAGCATTTTTATATGCTCATTATACTAATGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58676 True 367 lncRNA 0.39 1 2909572 2909938

Neighbor

gene id symbol gene type direction distance location
CI01000009_02799246_02827589 NA coding upstream 81932 2799031 ~ 2827640 (+)
CI01000009_02713403_02713914 NA coding upstream 195574 2712958 ~ 2713998 (+)
CI01000009_02674026_02678655 NA coding upstream 230826 2673802 ~ 2678746 (+)
CI01000009_02667840_02668883 NA coding upstream 240408 2667442 ~ 2669164 (+)
CI01000009_02656782_02657768 NA coding upstream 251749 2656557 ~ 2657823 (+)
CI01000009_02918681_02973307 KDM6A coding downstream 8743 2918681 ~ 2973952 (+)
CI01000009_03123137_03137452 CCDC80 coding downstream 212178 3122116 ~ 3138311 (+)
CI01000009_03145417_03159851 F5 coding downstream 235479 3145417 ~ 3159914 (+)
CI01000009_03164135_03169470 GPR161 coding downstream 252380 3162318 ~ 3170140 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S coding downstream 292269 3202207 ~ 3208984 (+)
G51500 NA non-coding upstream 1976 2907366 ~ 2907596 (+)
G51496 NA non-coding upstream 7260 2901947 ~ 2902312 (+)
G51495 NA non-coding upstream 7849 2901474 ~ 2901723 (+)
G51388 NA non-coding upstream 65253 2840410 ~ 2844319 (+)
G51470 NA non-coding upstream 85866 2822962 ~ 2823706 (+)
G51502 NA non-coding downstream 45 2909983 ~ 2910239 (+)
G51503 NA non-coding downstream 638 2910576 ~ 2910931 (+)
G51504 NA non-coding downstream 3434 2913372 ~ 2913800 (+)
G51505 NA non-coding downstream 3945 2913883 ~ 2914099 (+)
G51507 NA non-coding downstream 73605 2983543 ~ 2983764 (+)
G51274 NA other upstream 559086 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 1008146 1897343 ~ 1919516 (+)
G51122 NA other upstream 1227606 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 1471217 1429873 ~ 1435328 (+)
G50920 NA other upstream 2139339 769841 ~ 770233 (+)
G51529 NA other downstream 152095 3062033 ~ 3062587 (+)
G53388 NA other downstream 2612304 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 2950364 5931718 ~ 5943899 (+)
G53651 NA other downstream 3335626 6245564 ~ 6248392 (+)

Expression


Co-expression Network