nrap (nrap,LOC107755535)


Basic Information

Item Value
gene id nrap
gene name nrap,LOC107755535
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5771619 ~ 5803122 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259249.2
AAGACCAGAGCTAAGTTTAACACAGGTCAGAGAGTGAGACACAAGTGGGAACAGGGGACTAACTGGGACGCTTTGCCTTCCCGTTCTGTGGACTGTCCAAAGCTACTGATTTTTTAGAGAATTGGTATGCCGAGTTGGTTTTCTCTGTAGTGACGGATCCAGTGGGGAAAAACTAAACATGAATATTCAAAACTGTGCCAGGTGTGGGTTTGTGGTGTACCCAGCTGAGAAGATCAATCTCATTAGTCAGAACTGGCACAAAGCATGCTTCCACTGTGAGGTCTGTAAGATGGTTCTAACTGCCAATAATTTTGTAAGCCATCAGAAGAGACCGTATTGTCAAGTACATAATCCACGGAACAACACCTTCACCAGCGTCTATGAAACTCCGGTCAACATCAATGCTAAGAAGCAGGCAGAGGCTGTCAGTGAGATTAAATACAGAGAAGAGGGTGAGCGTTTCATGTCCACGTTCCACTATGACATGAGATCAAAGGAACTTGAGCAGGCCCGCAAGGCCAGCCAAATGACCAACCAGGCTTACCAGTCTTTAGGGTTTTCAGAGCAGCAGACATGGTACTCAGGCAGTGTAACCAGTCAGGAGATAGTTCGCATGAGTCAAGCACAGAAGACCATCAGCGATGTGGAGTACAAACGGGGCCATGATGAACGAGTTACACAGTTCACCTCTGTGACTGACACACCTGGAATCCTGCACGCTAAGAGTGGCACCTCACTGGCTAGTGATGTGAAGTACACAGAGGTTTATGAGCAGTCCAAAGGAAAAGGCAGCTTCCCTGCTATGCTAACTCCTGGATATGAAGTGGCCAAGAAAGCAAATACTCTTGCTAGCAATGTGGAGTATAAGAAGGGGCATGAGGAGAGAGTGTCAAAGTACACCACTGTGACAGATTCCCCTGAAGTGCTCCTGGCTAAAAGCCAAGGGAGGATTGCAAGCGATTTTGTCTACACTGAAGATTATGAACAGCAGCGAGGTAAAGGAAGCTTCCCTGCCCACGTCACTCCTGGATACCAAACAGTCAAGAAAGCAAATGAAATGGCCAGCAAAGTGAAGTACCAGCAGAAGTATGAGCAGGAGATGAAGGGTAAAGCGAGTACAGATGCTGGAGCTGCTGAGTTTGCGCTTGCCAAAGAAAATGCTGAGAAATTCAGCCAGCATGCCTATACTGAGGAATATGAGCAGCAGAGAGGCAAAGGAAGCTTTCCTGCTATGATCACTCCTGGATACCAGATGGCCAAGAAAGCCAATGACATTGCCAGCGATCTGAAATATAAGAAGGACCTGAACAAGATGAAGGGCTCCTCTGCCTATCACAGCCTGACAACTGATGACAACCTGACTCTGAAGAACGCCTGCAAGATCAATAAGCTTGTCAGCGAGGTTGAATACAAGAAGGACCTTGAGAACACAAAAGGACACAGCATCAACTACTGCGAAACACCCCAGTTTAAAAATGTGTCCAAGATCGCCCAGTTCACCAGTGATAATAAATATAAGGAGAAGTATACCAGTCACATGAAGGGTCATTATGAGGGGACTGGAGTGGACAAGAAAACTGCACATGCCATGAAAGTCAGAAAGCTGGCCAGTAACattgcATATAAGTCAGACTATGAGCAGGAAAAGACAGAGCAGGGGGAGTACAACTACCCAGCTGACATCACCCCATCTTACCAGACCCAGAAGAAACTGGAGCCTCTGAAAGATAAAAATTACAGACAGCACATTGACAAGCTGAAGTACAGCCAGGTGACAGACACTCCAGATATCATTCAAGCTCGAATCAATGCTCAGCAACTGAGCAATGTGAACTACAAAGCCGATTATGAGAAAACTAAGACCCAGTACACCATAGCTCAAGACACGCCTCAGCTCCAGAAGGCCAAAGCCAATGCTGAGCTTATCAGTGATATTAAGTATAAAGAGGAATGGGAGAAAAATAAGTCTAAAGTACATGATGTTGGTGCGGACACACTGACCTTAAAAGCTGCCAAAGCCTCTAGAGATCTGGCCAGCGATATCAAATATAAGGAATTGTTTGTAAAGAACAAGGACAAAGCAGTGGGTGTGAATGTGAGTGACTCCAAAACCCTCCATTGTCTCCAAGTGGGGAAGCTGAACAGTGAGATTGCCTATAAGAAGAATTCAAAGGAGACTCAGGCTAAGTATAACCTGACGAAAGACATGGTGAATCTAAGCCATGCGAAGAAGGCCCAGGCCCTGGCCAGTGATCTGGACTACAGGAAGAAGCTCCACGAGTACACCATCCTGCCTGATGACATCAAAGTTCAGCAGGCTAAGAAGGCCTACAACCTCCAGAGTGATAACCAGTACCGATCTGACCTGGTCTGGATGAAGGGAGTGGGCTGGGAGGCTGAAGGCTGCCTGGATGTTGAACAGGCCAAGAAGGCTGGAGAGCTTCTGAGCGATAAAAAGTATCGGCAGAAGGTGGACAGTGTAAAATTCACCCAGGTGGCCGACACCCCATCCATACAACATGCCAAGAAGAGCCAGGAACTACAGAGTGATctGACATACAAGGCAGGTACAGAGCAGATCATTCATCAGTACACTGTGAGCAAAGACGAGCCTCTCTACAAGCAGGCCAAAGCTAACGCGGAGCTTCTCAGCAATAAATCATATAAGAGTAGCTGGGAAGCCCAGAGGGAGAAGGGCTTTGAGCTGAGTATGGATGCACTGTCTATCCTCACTGCCAAAGCTAAGAGGGATCTTGCCAGTGATGTGAAGTATAAGCAGCAGTATGAGATGACAAAGGGGAAGATGATAGGGGTGAAGAATGTAACAGATGATTCTCACTTGGCCCACTCAGCTCTGGCCACTAAGCTCCAGAGTGATCGCAACTATAAGAAAGAGTACGAGGATACTAAGACCAAGCACAGTGCCTCGCTTGATATGATGACCATCAGCCATGCTAAAAAGGCCCAAGACCTGGCCACAGAGACCAACTACAGAACCATCCTGCACGAGTACACCACCCTGCCCAGTGATATGAAGGTGGCATGGGCCAAGAAAGCCTACGGCCAACAAAGTGATAAAAAGTACCGCTCAGATCTGAACTGGATGAAAGGTGTGGGCTGGGAGACCACTGGATCTCTCGATGTGAAGCAGGCTAGGAAAGCTAGTGATCTCGCCAGTGAGAAAAAGTACCGCCAGCATGTTAGTGCTCTGAAGTTCACCAGCGTGGAGGACACGCCAGAGATGGTGCAGGCCAAACTCAGCAATAAGCTGGCACTAGACAGGCTGtacagagagaaaggagagactGAGAAGCACAAGTACACAATGACAGGAGATCTGCCAGAGCACGTGCAGGCCAAGATGAACGCTAGGAACATCAGTGAGTCACGATACAAAGAGTCATGGATGAAGCTCAGAGATGGGGGCTACAAGCTGCGCTTGGATGCTATTCCATTCCAGGCTGCCAAATCCTCAGGGGAGGTGCTCAGTGATCAAAAGTACAAAGAGGAGTTTCTGAAGATGAAGGGTAAGATGATCGGGCTGAAAGCACTCCAGGATGACATCAACATCGCCCACTCTGTGCATGCCAGCCATCTACAGAGTGATATCAAATATAAGAAGGATTCTACTAAGGTGCACTCTCAGTTCCACCTACCGATGGACATGCTGGAAGTAGCCCATGCTAAGAAGGCCCAGGCTCTGGTCAGCGATCAGGACTATAGAATGACCCTAcacaactacactacactgcctGATGACCTAAATGTGCAGGCTGCTAAGAGAGCTTATTCTCTGCAGAGCGAGaaaGCCTACCGTTCTGATCTGAATTACCTGCGTGGTGCGGCCTGGATTGCCACCGGCGCCTTACAAATCGAAGGCTCCAAACATGCAACACAGCTGATCAGCGATAAAAAGTATAGACAGCAGCCGTACACATTTAAGCACACATCAGTTACAGACTCTCCTGACATAGTTCACGCCAAGCTCAGCAACAAGCTCACCAACGAGCGTCTATACAAAGAAAAGGGTGAGAACTTCAGGCATAACTACACAATCACAGCTGAGCGACCAGAAATCACCCAGGCCAAGATCAACGCTGCTAATTACAGTGATACCAAGTACAAAGAGTCATGGCACACGCTGAGAGCACAAGGCTATAAACTGACCATGCAAGACATCCCCTTCCAAGCAGCTAAAGCATCTACCGACATTGCCAGTGATTACCAGTACAAGCACAACCACGTCCTGGAAAAAGGCAAGCACATCGGAGCACGGAGCATCATGGATGACTCTCACCTCCTGCACTGCATGCAGACGGCACATCTGCAGAGTGATAAGAATTACCGTAAAGATGCTATTGCCACCAGCGGCCAGTTTCACCTGGGAATGGACCTGGTTAACCTGGTCCACGCTAAGAAAGCCCAGTCTCTGGCCAGTGATCAGGACTACAAGACCCGCCTGCATTCCTACACTGTCCTGCCTGATGACATAAAGGTGCAGTGGGCCAAGAAGGCCTATGAGCTGCAGAGTCAGaATGCGTACAAGTCTGATTTGAACTTCATGAAGGGAGTGGCATGGGATTCAGTAGGAGCTCCTCAGCTGGAGTCTGCAAAGAAAGCAGGAGAGCTCATCAGCGATAAGAAGTATCGTCAGCTTCCTGACAGGCTGAAGTTTACCCAGGTTGCAGACTCACCTGATATCATTCATGCTAAGAACAGCTACATGCAGTGTAGTGAGAGGCTGTATAAGTCTGGAGATTCTGACTCCATGCATAAGTACACCTTACATGCTGATCACCCCGACTTTATCAGAGCAAAGATGAACGCTCAGCAGATCAGTGATAAAGTCTACAAGGCATCAGGAGATCAGGTGAAGACTGCAGGATATGACTTGAGGCTAGATGCCATTCCCTTCCAGACAGCCAAGGCCTCTAGAGAAATTGCAAGTGATTTCCGCTATAAGGAAGCCTTTGTGAAGCAGAAGGGTCAGCAGGTGGGTCTGCTCAGTGTAGAGGACGACCCCAAGATGAGGCACTCGCTGGCAGTAGGCAAACTGCAGAGCAACAACGAGTACAAGAAGCAGTTCCAGGAGACCCGCTCCCAGTATAAGATCCACGCAGACCAGCCTGAATTCCTGCAAGCAAGGAAGAGCCAGGCTCAGGCCAGTGACCTCAGCTACCGCCAACGCCTCCACAACTACACATGTGACACAGAACAGCTCAACTTTAAACACGCCAAAGAGGCCTACAAGCTGCAGAGTGATGTGAAATATAAGTCAGACCTGAACTGGATAAAGGGAGTTGGCTGGACTCCTCCGGGCTCTCATAAGGTAGAGATGGCTCGGAGGGCAGCAGAACTTGGCCTGGCTGATGGAGTGGACACTGATGAAGCTATTGCGAAGTACCAGCAACTAATGATGTTCCAGCGCGAGCAGCAGATgctagagcagcagcagcagcagcaggacttCTCGGATCAGGTGGAAACTGAAGAACATGTCGAACAGTCTGTGGTCAATCCAGATGCCATGGAGATCCTCCATGTGAAGAGAAAGAAGACCATCCACACTACTTTCAAACAAGCAAAGACTATGACATCGCAGTCTGTAACATCTCACTCTTCTACAAAGCAGTCCACCGAGAGCCAGCACAGGTCCATTACAGAGAAATCCACTGAAAACAAGTCCATAACGATGTAAGCCCaaattattacatatttaaattattacatatttaaggATGTGATGTGGAGCCTGGTGTTCCTTGCCAGTAGATCATAGCAAGATTGATGTAGGTTATATGAAACCAAATAAATGAACAGAgtatgtaagtaagtaagtaacaGAAGGGTGAGGATAAGATGAGTGCAGAATGGAAATGTGTATGTGTCTAATGGTCATATAAGGTAGGGGTTGCACAGGTAGTAATTTTTAGTTGTATTTGAATAGTTATTCAAAAAAAGGAGTGAACTAGTCGTAACTCCCATAGCAAATCCTGattcaaaaataaatgtgttgtgttgcaatttattttttttttctttcccattaGCATGGTTTAATACTGATGGACAACAGCAATGAATGCATCAAATCTTAATTCACATTCTAGCTAAATACAGCTccaaattaaattgtttaaaaaaaaaaaaaacatatgcaaaGAAATACAGCTGCACAGGTTCTTACTTTACACCTCGTCTCTCACAGTGGATATTTAAACAGTGATATGAATGTTGTATTGTTCTGTTAAATTATCTTCCTTAAGCAGTCAGTAACTATATTTTACTCACTTTCAAGAATCCTCACAGCTCCATAGCGCAATATGCTCATTGCTCTGTAGTGAGTGAGACACTATGACCTCTTATCTCTGTGGAAATACTGGCTTTTAgaggcagtattttttttactgcagttagtagttttttgtaatttggctcaaaaaagtgcattgctgctgttttttttttctccttctgacTTATCGACAGCTCCACGCCGCAGCCACTAGTGGATGTCCTGGTAGACTAGTCGATTAGTCTGTGCAACCCCTAATATAAGAAGAATATTAATGAAGGAAATATTTTGGAAAGAAGAATATTTTAGAAAGTGTATCGTGCAGGTGCAGAAATTGTGGACTTTTCATGGTTTATTGTTCCTATAGTGAAGACATAAGTgcctttcttgttttttttcctattaaTTAATCTTGTTTCTtcattaaagggaaaaaaaacatattttaaatagtgatgaaactttatttaacattgccattctgtagaaagaaaaaataaacaaatgactgCTGTGAAAAGTCACAGGTGGACGAATAACTGTTTAGACTGCCAAcggcagaattgttatatttcaGATATATTTGATATACTGTATGCCTGACAGGTTCAGCTTTGTGAATTAAGAGTTCCTGCTTGATGTATGATTTATGATCATGAAATCTAGAAATAAAGGTTTTGTAGAAGCTGCACAGCAACTTGA

Function

symbol description
nrap Predicted to enable actin filament binding activity. Predicted to be involved in cardiac muscle thin filament assembly. Predicted to be active in Z disc. Orthologous to human NRAP (nebulin related anchoring protein).

NR:

description
PREDICTED: nebulin-related-anchoring protein

GO: NA

KEGG:

id description
K24421 NRAP; nebulin-related-anchoring protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259249.2 True 6997 mRNA 0.46 44 5771619 5803122

Neighbor

gene id symbol gene type direction distance location
tectb tectb,LOC107755437,LOC107566341,LOC107702437,LOC107722201 coding downstream 84460 5600368 ~ 5687159 (-)
acsl5 acsl5,LOC107702457,LOC107755526,LOC107566323,LOC107581566,LOC107722228,LOC107684041 coding downstream 175181 5579330 ~ 5596438 (-)
vti1a vti1a,LOC107566351,LOC107702459 coding downstream 199985 5400928 ~ 5571634 (-)
LOC103030716 crygmxl2,LOC103030716,LOC108426411,LOC106516994,LOC104933141,LOC103368160,LOC107581669,LOC107702435 coding downstream 605994 5163950 ~ 5165625 (-)
LOC103029658 crygmx,LOC103029658,LOC108426431,LOC107684144,LOC107566847,LOC107755411,LOC107581668 coding downstream 608153 5160908 ~ 5163466 (-)
LOC103041412 LOC103041412,LOC108426492 coding upstream 15600 5818722 ~ 5822431 (-)
dclre1a NA coding upstream 39856 5842978 ~ 5852808 (-)
LOC103043680 NA coding upstream 125439 5928561 ~ 5934694 (-)
afap1l2 afap1l2 coding upstream 177867 5980989 ~ 6038592 (-)
pgs1 pgs1,LOC107690911,LOC107755482,LOC107722233,LOC107601408 coding upstream 350572 6153694 ~ 6178101 (-)
G34719 cpn1,LOC107722209,LOC107684044 non-coding downstream 89680 5677418 ~ 5681939 (-)
G34713 NA non-coding downstream 111715 5659024 ~ 5659904 (-)
G34708 NA non-coding downstream 126514 5644906 ~ 5645105 (-)
G34688 zdhhc6,LOC107684040,LOC107722226,LOC107581631 non-coding downstream 196861 5573473 ~ 5574758 (-)
G34682 NA non-coding downstream 380299 5391095 ~ 5391320 (-)
G34760 nhlrc2 non-coding upstream 59335 5862457 ~ 5867932 (-)
G34765 adrb1 non-coding upstream 83916 5887038 ~ 5891991 (-)
G34769 NA non-coding upstream 124567 5927689 ~ 6012669 (-)
G34791 NA non-coding upstream 239803 6042925 ~ 6043439 (-)
G34829 trub1,LOC107755443,LOC107702428 non-coding upstream 346108 6149230 ~ 6152861 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other downstream 409133 5255619 ~ 5362486 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other downstream 775706 4971698 ~ 4995913 (-)
G34214 NA other downstream 1888150 3836621 ~ 3883469 (-)
prr15l prr15l other downstream 1982427 3783125 ~ 3789192 (-)
G34046 NA other downstream 2577242 3181168 ~ 3194377 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 100466 5903588 ~ 5928154 (-)
G34770 NA other upstream 132713 5935835 ~ 5939400 (-)
ablim1 ablim1 other upstream 245879 6049001 ~ 6147311 (-)
LOC103026268 bahcc1 other upstream 563562 6366684 ~ 6513701 (-)
G34953 NA other upstream 733899 6537021 ~ 6541364 (-)

Expression


Co-expression Network