Gene
RNA
| Item | Value |
|---|---|
| gene id | G51504 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 2913372 ~ 2913800 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58679 | True | 429 | lncRNA | 0.38 | 1 | 2913372 | 2913800 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_02799246_02827589 | NA | coding | upstream | 85732 | 2799031 ~ 2827640 (+) |
| CI01000009_02713403_02713914 | NA | coding | upstream | 199374 | 2712958 ~ 2713998 (+) |
| CI01000009_02674026_02678655 | NA | coding | upstream | 234626 | 2673802 ~ 2678746 (+) |
| CI01000009_02667840_02668883 | NA | coding | upstream | 244208 | 2667442 ~ 2669164 (+) |
| CI01000009_02656782_02657768 | NA | coding | upstream | 255549 | 2656557 ~ 2657823 (+) |
| CI01000009_02918681_02973307 | KDM6A | coding | downstream | 4881 | 2918681 ~ 2973952 (+) |
| CI01000009_03123137_03137452 | CCDC80 | coding | downstream | 208316 | 3122116 ~ 3138311 (+) |
| CI01000009_03145417_03159851 | F5 | coding | downstream | 231617 | 3145417 ~ 3159914 (+) |
| CI01000009_03164135_03169470 | GPR161 | coding | downstream | 248518 | 3162318 ~ 3170140 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | coding | downstream | 288407 | 3202207 ~ 3208984 (+) |
| G51503 | NA | non-coding | upstream | 2441 | 2910576 ~ 2910931 (+) |
| G51502 | NA | non-coding | upstream | 3133 | 2909983 ~ 2910239 (+) |
| G51501 | NA | non-coding | upstream | 3434 | 2909572 ~ 2909938 (+) |
| G51500 | NA | non-coding | upstream | 5776 | 2907366 ~ 2907596 (+) |
| G51496 | NA | non-coding | upstream | 11060 | 2901947 ~ 2902312 (+) |
| G51505 | NA | non-coding | downstream | 83 | 2913883 ~ 2914099 (+) |
| G51507 | NA | non-coding | downstream | 69743 | 2983543 ~ 2983764 (+) |
| G51508 | NA | non-coding | downstream | 75108 | 2988908 ~ 2989239 (+) |
| G51510 | NA | non-coding | downstream | 84079 | 2997879 ~ 2998415 (+) |
| G51514 | NA | non-coding | downstream | 87810 | 3001610 ~ 3001908 (+) |
| G51274 | NA | other | upstream | 562886 | 2255099 ~ 2350486 (+) |
| CI01000009_01897343_01919208 | PIKFYVE | other | upstream | 1011946 | 1897343 ~ 1919516 (+) |
| G51122 | NA | other | upstream | 1231406 | 1680146 ~ 1681966 (+) |
| CI01000009_01431700_01434463 | NA | other | upstream | 1475017 | 1429873 ~ 1435328 (+) |
| G50920 | NA | other | upstream | 2143139 | 769841 ~ 770233 (+) |
| G51529 | NA | other | downstream | 148233 | 3062033 ~ 3062587 (+) |
| G53388 | NA | other | downstream | 2608442 | 5522242 ~ 5540638 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | downstream | 2946502 | 5931718 ~ 5943899 (+) |
| G53651 | NA | other | downstream | 3331764 | 6245564 ~ 6248392 (+) |
