kbtbd2 (kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836)


Basic Information

Item Value
gene id kbtbd2
gene name kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 13339493 ~ 13351094 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260018.3
TCCCCGCGTCCAGTTGGCTCACTTCCGTTCCGGAGCAGCGACTGCTCAGTTTGTAGTATAAAGGCTTTAGTAGCTAAAGGTCGCGGATTATTAGTTTATCGATATCGGATTTTATGGTGTAAACCTGTATTTGAGACTCGGACTAATCCTGGTCAGTTATCGCTGTGCTATAAGGAGTTAGCCGGCTAAGTTCAGGATTTAACAGGCTGTAAGTAAGgaggttagctaagttagcttagcttggttagctaggCTAGATGACTAGCTCGCATGTAAGCGGCGAAATCTGCagtagctaggttagctatagCTAGCCTGTTTTGATAGCCCGGCGGGTATCAGGATGAGTGGTGTAGGGTGTGTTAACGGTTAGTTGGGACTCATAGTGGTGATAGGTTAGCTGTTAGTGGAGCTTTTAAACGTATCGAGGGTTAGATATCTTGTTAGATACTTGACTGCAGGCTTTTGGCAAGCTAACGGCTCTGCAGTATtatttagctaacgttagctaggtagTTAGCTTAGCTGTTAGCTAGCGCAGTGTGTGGATGTGCGGCTGCAGGTTTACTGCAGGAGAAACAGAAGCCGGAGAAGGAAGCTGCTTTTATTTCTGGTGTCTATAGTAAAGTGTGTGAACTAATTTAGGTGGTTGGAACGGCTAAACTGGCCTGATAGCTGTTAAATCACCCGGATACTCCGCGCAGAGCTCCTGGAGCTGAGGATTGCAGCAGTGAGATACACTGGACGTAGCACTGATGTAAAATCCTTTGACCTCTCTCCGCCGCTACCTCAAACTGAAGAAAAAGTCTTCATTACCTTTCTTCAGTATCCAAACACATTCAGTTTCTTAGCACATTCCCTTCTAAATAGTTATCATGTTGATAAGAAGCATCTGcatctataaatctataaaagTTTAAGGTTTATCTTCTGAGATTTGCAGGGATTTTAGTtgtttgttagattttttttcccctctgctGCTGTATTTGTTGTTGGGACCGGTTAAGCCGGTGGTTGGATGAGTTTTTGAAGCTGGGGTGTGACTCATGGGCTGCAATGATGTCGGAGGCAGGAGTTTGCCGTCCGGTGAACACAGAGTATGCTGTTTCTGTGCTGGAACAGCTCAAGTTTTTCTACGAGCAGAAATTACTGACGGACATCACTTTGCTGGTGGAAGACAATGAGTTCCCCTGCCACAAGATGATTCTGGCTACATGCAGCTCTTATTTCAGAGCGATGTTTATGAGCGGTTTAAGTGAAAGTAAGCAGTCACATGTTCATCTGAGGAATGTGGATCCTGTCACTCTGCAGACAATCATCACCTATGCTTATACAGGCAATTTGGCCATCAGCGACAGTACTGTTGAACCTCTGTATGAAACAGCCTGCTTTCTACAGgttgagGATGTGTTGCTGCAGTGTCGTGATTACTTGGTGAAGAAAATCACGGCAGATAACTGCGTGCGAATGCTGAGCATTGGCGATATGTTCAGCTGTAATGAGTTAAAGCAGAGCGCGAAGCGGATGGTGGAGCACAAGTTCCCAGTGGTATATCGTCAAGAGGCCTTCCTGCAGCTTTCCCACGAGCTGCTGCTAGACCTGCTCAGCAGTGACAACCTGAATGTGGAGAAAGAGGAGACGGTGCGGGAGGCGGCCATGTTGTGGCTGGAGTACAACATGGAAGCCCGCTCGCAGTACCTGTCGTCTGTCCTTAGCCAGATTCGGATTGACGCGCTTTCTGAAGTCACGCAGCGTGCCTGGTTCCAGGGCCTTCCTCCTAATGATAAATCAGTGGTGGTGCAGGGTCTTTATAAGTCCATGCCCAAGTTCTTCAAGCCAAGGCTGGGGATGACCAAGGAAGAGATGCTCATTTTTGTGGAAGCTGAGTCGCCCGGTGACAGTCAGCCAATAGTGGTCGGTCCTCGTCACACTGTGGTGTGTTACAGTCCGCAGGCTGAGAAGGTCTACAAACTAAGCAGTCCGCCTGGAGACCTGCAGAAGGTTGGTACTTTGGTCACTCCGGACAATGATGTTTTTATTGCTGGTGGTCAGGTACCTCTTAAAAGTGCTTTGGCTAGCCATGGCAGCAAAAGTGGCAAGCTTCAGGCTGCATATTGCTCTGTTGACAGTTTCTACTGGCTGGATGCCCAGCAGAACGCCTGGGTTGCCAAGACGCCCATGCTCTGTGCTCGCACCAAACCTTCCCTGGTGTACTGCCAGGGGCATATATACGCTATTGGTGGTGATAACGTAGGCGGAGAGCTTAATAAGCGCACGGTTGAACGGTATGACTGTGAGCGAGATGAATGGAGCATGACTAGCCCCCTGCCCTGTGCctggagctggagcacagcCGTGGCTGCCCGAGACTGTGTCTACGTTATGAGCCACGACCTCATGTACTGCTATTTCCCTCACGCCGACACGTGGGTGGAAATGGCCATGCGGCAGACGAGCCGCTGCTTTGCTTCTGCTGCAGCGCTGGGTGACCTCATCTTCTACATAGGTGGCCTTCATGTCGTGGGGAACTCCAGTTTGCGGCTACCCACGAGCACTATTGATGGTTCTTCTGTTACTGTGGAGATTTACGACGTGAACAAGAACGAATGGCGGATGGCTGCCAACATCCCAGCTAAACGCTACTCTGATCCATGCGTTCGTGCTGTAGTTTTGTTGAATTCCTTATGCATCTTTATACGTGAAACTCACCTTAACGAACGTGCAAAATACGCCCTTTACCAGTACAACCTGGAGCTGGACCGGTGGTGCCTGCGGCAGCCTGTCTCTGAGCGCGTGCTGTGGGACCTGGGTAAGGACTTCCGTTGCACTGTGGGGAAACTGTACCCATCCTGCTTGGAAGAGTCACCATGGAAACCGCCCACCTACCTCTTTTCCCCGGATGGAGTGGAGGAATTTGAAGTGGACAGGGACAGGGACATGGTAGCACTGCCGCATGTATAGCCTTAGAGCTCAAACTTTGAGATCATAGCATTTTTCCCCCCCTAGCCCAGGGTAACTAGTTGCAATTCTTAAGGGTTGTAGTTCCACCAAGTTTCTCTTCAAAATCATTTCTTATCAAACACACCCGATTACACCTGGTTACTGAAGGAATACTCCATTTTACTCTCCGTCTGATGCATCTGTAGTCTCCAGTCAGTCCAAAGAAATAATATGATTATAAATATGTTCTAACTTGCGAAGAACTTGCTGGACATTCATGAAATTGTATCAGTAATGTTACCCATAGTTTTGTACTTCATTGAGGTAACCGTATTTGTAatacagagctgtaaatatgtatatttggtTCTTTCAAAGAATTGACTAGTCAAGAGGGATGAAGTACAACCATAATGATGTGTGTCTGAAGTTTGGTTTCACCTAATTAGATTGAATACCAGAAAGCCTTTGGGGGGAAAATAAGTCAAAAGTACTAAAACTGTTCTTCGTTTTGCATTGTCAAGTTGGATAAAACGAAACCTTATAAGCGCAGCACTGGCATGGCATGACATGATTGTCAGCAGTAATTGTCCTGTAAAAGCCGAAAACTGAGATTAGGCTGAGCACACTGGAGTATTCCTTTAATTCCATGAATCATGTGTGTTCGAGCCGGGAAAGCCCTAAATCATGCTCGGCTTCCACCTTCCTGCAGGACTAAGGTAGACACTCCTGCATTAGCTTACCTGTTTTCTGGAACTTTCTTTAAGTCTTCAAATTACTTCCAGTAGGATGTTCTGAGAGGATTAAAGAGTGAGAATCATTTAACATAGCAGGGTGTTCGTGTTCTTACTTCCATtaggaatttaaaaaaaaaatacgtacTTTGCAAAATGAAGTAAGACCCACCCAGTCAACCACAACCTCCAATCCCAACCTGCCCATGCTGCCCCAGGAGTCACCACTGATAACTTGTACCATAACCATTATACACTTTAGCTGTAATCATCATAATCATTTTTTGGTTGAACAATGTGATAATGTTAAGAAACTGATGGTATTGATTTTGATTATGATGACATAAAGGTTAACCGCCAGCTAACTGGCATTAGCAGTGAAATACTGTtttatctgtattattttttgaCAACATACCCAAATAAGGGACTCCTGAATTCAAGCTGGATTTGTGCATGACGAAAAAAAACCcattaatttttaaatgctgtACTAAACTGAAATGTACAAAAGCTTACCCTACACACACAGTAGTCGAAATGTGAGCTATTACAATTATTACTACTTAAAGCTACATGCATGCAACTGAGTTCCTGTTCTAGTAAGGCTACTACTTTTATTCAATGGAACTGCATCATCTCGGCCACAGTATACAATGGCCAGGGCCTACTTAAACTAGTCTCATGTCTCAGAAGAGTTAATGTTACACACATTTCTCAGTGTTATACAatgttaggattaggttttttATTTCTGATCAGTGCATAACTCCACCACACTAAATCTCCCAAAGtcacttaaaggagaaatctggtgtgaaatggacatTAGGTGTAGTGAAACGTAATAACGAGaataaacttttgttgaatagcccacctccattcaccctcAGCATTCCGAATTAAAGCAcgtttagccgatgctcccaacaggctaaTGCAATGCTAATAATAGTAACATAGTGGCGCACATGCAAAGaaattgctattatttaacATGCTCAAAGAAGCTCCGcatttcattggtagaattctgagggcccttaCATTTAAATCGAGACACTGAGAAATTTGAAAGTGCACAGCCAgtttattaaaaagtgtttataaacAGAGTACCTTGAGCTAGTTCTCCGGGCGATAGTCACAATAAGTCGACAGATTGCTAAATGAATTCAGTGGAAATGGAATCTGTTCCCCTTTCCTACCTATTCACTCAGCAGTCGACTTATCGTGACTTAATTTctcaaggtactgtgtgtataaatagtctTTTTTTCTCAAAGTTATCAGTGCATTTTTTAATGTCAAAGCCattagaattctaccaatgaagttcTGAGATTGACCttgttaatgatgtaaaaatggCGAATTCTTTATGTGGGTAACACTATGTCCTTATCACTAgcgttgtttgtttgttgaaagcatcagctaaaagctctgtatttcagaatgctgggggtaaACGAAGGTAGTCTGTTCGACAAAGTTTGACAGAAGTTCGTGCTTgccatcatgtttcactacattaAGTCCATTTCactccatatttttttcctttaactaTGGTTTGCATGTGAATTTAATGTTAACAGATGGTGACTTGCTTATAGACTTGTTTAGTGTGGATCTAGCAATGTCTGCATTATGCTAGGACTCAGGAGTTCCTTATTTGGGCATTTTGGCGATACAGTGGCATGTCTGCAGAAAGGTTATTGTACCAAACATCctgttttattctttctttgCCTTTTTACATGGTTTGTCCCATCTTTACTAACCATAGAATGCAGTGTAATCATGTGTACGGGTCACGTGTAGGTGAGTGTGTTTAGGTTCTTAGGAGCTGACTGCTGGTCCAGTCGGTGGTTCACTTGTTCATTTCATGCATCTCTCAGCTCCAATCCTTGTTGCCTCTACAAAACTACAGATCCCTCTATACAGTAGGCAcggcatcatcatcatcatctcctcTGTTGGGTTTgctggaatttttttttcttctgtatctCTAATAATCTGGCTTACATGCTCACATACCCATCGCCGCGCTCAATGGAATTTGACTTTATACATATTTGTGAGCTGCTGAAGTATTGTCTCCTTCACATAAAAAACACCTTGCAGTGTGGGGGACAATGATCAGGTCTATtttgtattaagtatattttatattatttaatatcagCCATTACTGTAGTAAGACTgggtatgtatatgtattttgtcttttctctgttagtttgttttttggtCAGATTTGAGGGGACTTGCTGCTGATTGATTCTTTTAGGGGGGGAAGAGGACACGCCCAAGCCTGTTGCTATGGCAAATGTTCCAGCAACCACTAGCAGTTGGGAAGGGGTGGGAGTTGATGGGATTCTCGTACCATAACCATTTGAGCACAGGTGCTATCAGCAGATTCTTTACTAGCATGTTCAACTGCGTCCTGTTTTTTTGGCACTGTATTTTGAAtgaacattaatttattaaaaaccatACCAAAATA

Function

symbol description
kbtbd2 Orthologous to human KBTBD2 (kelch repeat and BTB domain containing 2).

NR:

description
PREDICTED: kelch repeat and BTB domain-containing protein 2

GO: NA

KEGG:

id description
K10470 KBTBD2; kelch repeat and BTB domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260018.3 True 6195 mRNA 0.44 4 13339493 13351094

Neighbor

gene id symbol gene type direction distance location
avl9 avl9,LOC102783546 coding downstream 3470 13312552 ~ 13336023 (-)
LOC103042649 NA coding downstream 42063 13271875 ~ 13297430 (-)
LOC103042955 LOC108431373,LOC106578596,LOC103365861,LOC106590056 coding downstream 78667 13254448 ~ 13260826 (-)
LOC111192419 NA coding downstream 129986 13207594 ~ 13209507 (-)
trnam-cau_20 NA coding downstream 139255 13200166 ~ 13200238 (-)
cdh20 cdh20 coding upstream 10642 13361736 ~ 13385263 (-)
LOC103043889 ppp1r9bb,LOC107741705,LOC107684769,LOC107713069,LOC107675672 coding upstream 40725 13391819 ~ 13420942 (-)
dnajc9 dnajc9,LOC107684784,LOC107751706 coding upstream 157862 13508956 ~ 13514238 (-)
grid1 grid1,grid1b,LOC106578986,LOC106589364,LOC103147060 coding upstream 531363 13882457 ~ 14439229 (-)
wapl LOC108435041 coding upstream 1214844 14565938 ~ 14616622 (-)
G36114 NA non-coding downstream 328481 13006516 ~ 13011012 (-)
G36125 NA non-coding downstream 333746 13005499 ~ 13005747 (-)
G36124 NA non-coding downstream 337474 13001731 ~ 13002019 (-)
G36123 NA non-coding downstream 344606 12994574 ~ 12994887 (-)
G36122 NA non-coding downstream 348072 12991074 ~ 12991421 (-)
G36223 NA non-coding upstream 94953 13446047 ~ 13450206 (-)
G36236 NA non-coding upstream 150202 13501296 ~ 13504050 (-)
G36253 NA non-coding upstream 208124 13559218 ~ 13573367 (-)
G36257 NA non-coding upstream 236692 13587786 ~ 13609936 (-)
G36283 NA non-coding upstream 327702 13678796 ~ 13758346 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other downstream 27968 13307088 ~ 13311525 (-)
G36074 NA other downstream 627948 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 1267066 12067533 ~ 12072427 (-)
clrn3 NA other downstream 2256311 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3908265 9426075 ~ 9431228 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 124072 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1434858 14785952 ~ 14797212 (-)
G36677 NA other upstream 2396306 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2486011 15837105 ~ 15840516 (-)
LOC103043629 LOC108412394 other upstream 3562476 16913570 ~ 16915285 (-)

Expression


Co-expression Network