dnajc9 (dnajc9,LOC107684784,LOC107751706)


Basic Information

Item Value
gene id dnajc9
gene name dnajc9,LOC107684784,LOC107751706
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 13508956 ~ 13514238 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260021.3
TCCCGGACCTCAACCTGACCGGCCGAAGAAGAGCAGAAGGCGGCAAAGTGAGAGGAGAGAAACAGCGAGAAGAGGGGGATTAGAGGGAAGAGAGGAAAACAACGGAAAACAGGGGACTATTTTAATCCCGTATCCAGTGTACAGCggGAGTCATGGGTTTGCTGGAGCAGTGCGAGCAGCTGTTTGGTTCCTCCAGTCTGTATGAGGTGCTGGGGGTCCAGAAGGGGGCTTCAGACGCTGATATGCGGCGCGGCTACTACAAGCTCTCCCTGCAGGTTCACCCTGACCGAGCCCCCGGGGATGAGCAGGCCACCACCAAGTTCCAGATTCTCGGAAAGGTTTATGCTGTGTTAAGCGACAAGGAGCAAAGGGCTGTGTATGATGAACAGGGCATAGTGGATGAAGAATCAGACTCCATTGATCAGGACCGTGACTGGGAAGAACATTGGAGGAGGCTGTTTCCAAAGATCACCCTTCAGGACATCTTAAACTTTGAGAAGCAGTACAAGGGCTCAGATGAGGAAGTGCAGGACCTGAAGAGGCTCTACCTGCTTCATGAGGGAGACATGGACCACATCATGGACCACGCACTGTGCTGTGAGCACGGAGATGAGCCTCGCATCCGGGAGATCCTTCAGAATGCCATAGATGCTGAAGACATACCTGCTTACAAAGCTTTCACCCATGAGAGCACCAAGAAGAAGGCCAACCGCAAAAGGAAGGCCAAGAAGGAGCAGCAGGAGGCGGATGAGATGCGGAAAGAGATGGGACTGGATGCTGAGGACAGTCTAGTGGCCATGATCCAGCAAAGACAGAAGTCCAAGGAGAAAGGCTTCAACTCTCTCATCGCAGATCTTGAGGCCAAGTACTGCAAGAAGCCCGCTGGAGGGAAGAAAGGGTCCAAAAAAAAGTGAGAGCTCATTGTTCGTACCTGAACTGGAGAAACCTTTTGCATCTCCCAGGACTGGCAAAGAGCTGGCTGCTCAGTTGTGACTGAAGGAACCTGCAGTGCGTGACTCTGGGCTGTTATCCATTCACAGCACACCAGATGAgttatttattatacagctGATGTGCAGTTATGAACCCTAAATGTGTTTACAAGTTTTAGGTTCACACTTAAAGGCCCACTGTCTGCTGTTTCCATCCATAGAACTGGggtttgtttgattgattggGATTTCTTTTCCTGCTCTTATGTTTGGTTTATCATGTATAAACAAGTTGTATGTAGTTGATCTTAAGCTTTTGTGGCACTTTCACATGTGTGTCTGTTGCAGTGGAACACACATGCTCATTTAAACATGTTGGAAttgaataaactttttttttttccta
>XM_007260022.3
GGCCGAAGAAGAGCAGAAGGCGGCAAAGTGAGAGGAGAGAAACAGCGAGAAGAGGGGGATTAGAGGGAAGAGAGGAAAACAACGGAAAACAGGGGACTATTTTAATCCCGTATCCAGTGTACAGCgggttagtgagtgtgtgtttaattcAGCCTTGTGTTAAATCCTGTGGACTTCTCTTCTTATTGGAATTcttcgttccaccttaaactttCAGGCACTGAATAGAAAAGCGCTGctctgtttaaggtggaattgaggATTGTAGCTAGCTAATAGAAGGAGTCATGGGTTTGCTGGAGCAGTGCGAGCAGCTGTTTGGTTCCTCCAGTCTGTATGAGGTGCTGGGGGTCCAGAAGGGGGCTTCAGACGCTGATATGCGGCGCGGCTACTACAAGCTCTCCCTGCAGGTTCACCCTGACCGAGCCCCCGGGGATGAGCAGGCCACCACCAAGTTCCAGATTCTCGGAAAGGTTTATGCTGTGTTAAGCGACAAGGAGCAAAGGGCTGTGTATGATGAACAGGGCATAGTGGATGAAGAATCAGACTCCATTGATCAGGACCGTGACTGGGAAGAACATTGGAGGAGGCTGTTTCCAAAGATCACCCTTCAGGACATCTTAAACTTTGAGAAGCAGTACAAGGGCTCAGATGAGGAAGTGCAGGACCTGAAGAGGCTCTACCTGCTTCATGAGGGAGACATGGACCACATCATGGACCACGCACTGTGCTGTGAGCACGGAGATGAGCCTCGCATCCGGGAGATCCTTCAGAATGCCATAGATGCTGAAGACATACCTGCTTACAAAGCTTTCACCCATGAGAGCACCAAGAAGAAGGCCAACCGCAAAAGGAAGGCCAAGAAGGAGCAGCAGGAGGCGGATGAGATGCGGAAAGAGATGGGACTGGATGCTGAGGACAGTCTAGTGGCCATGATCCAGCAAAGACAGAAGTCCAAGGAGAAAGGCTTCAACTCTCTCATCGCAGATCTTGAGGCCAAGTACTGCAAGAAGCCCGCTGGAGGGAAGAAAGGGTCCAAAAAAAAGTGAGAGCTCATTGTTCGTACCTGAACTGGAGAAACCTTTTGCATCTCCCAGGACTGGCAAAGAGCTGGCTGCTCAGTTGTGACTGAAGGAACCTGCAGTGCGTGACTCTGGGCTGTTATCCATTCACAGCACACCAGATGAgttatttattatacagctGATGTGCAGTTATGAACCCTAAATGTGTTTACAAGTTTTAGGTTCACACTTAAAGGCCCACTGTCTGCTGTTTCCATCCATAGAACTGGggtttgtttgattgattggGATTTCTTTTCCTGCTCTTATGTTTGGTTTATCATGTATAAACAAGTTGTATGTAGTTGATCTTAAGCTTTTGTGGCACTTTCACATGTGTGTCTGTTGCAGTGGAACACACATGCTCATTTAAACATGTTGGAAttgaataaactttttttttttccta

Function

symbol description
dnajc9 Predicted to enable heat shock protein binding activity. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; corneal epithelial cell; head; and immature eye. Orthologous to human DNAJC9 (DnaJ heat shock protein family (Hsp40) member C9).

NR:

description
dnaJ homolog subfamily C member 9-like

GO: NA

KEGG:

id description
K09529 DNAJC9; DnaJ homolog subfamily C member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260021.3 False 1338 mRNA 0.49 6 13508956 13514238
XM_007260022.3 True 1473 mRNA 0.48 6 13508956 13514218

Neighbor

gene id symbol gene type direction distance location
LOC103043889 ppp1r9bb,LOC107741705,LOC107684769,LOC107713069,LOC107675672 coding downstream 88014 13391819 ~ 13420942 (-)
cdh20 cdh20 coding downstream 123693 13361736 ~ 13385263 (-)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding downstream 157862 13339493 ~ 13351094 (-)
avl9 avl9,LOC102783546 coding downstream 172933 13312552 ~ 13336023 (-)
LOC103042649 NA coding downstream 211526 13271875 ~ 13297430 (-)
grid1 grid1,grid1b,LOC106578986,LOC106589364,LOC103147060 coding upstream 368219 13882457 ~ 14439229 (-)
wapl LOC108435041 coding upstream 1051700 14565938 ~ 14616622 (-)
c4h16orf62 cunh16orf62,c13h16orf62,zgc:163107,cssa28h16orf62 coding upstream 1320214 14834452 ~ 14861783 (-)
trnal-caa_1 NA coding upstream 1437399 14951637 ~ 14951749 (-)
trnal-caa_2 NA coding upstream 1437603 14951841 ~ 14951953 (-)
G36236 NA non-coding downstream 4906 13501296 ~ 13504050 (-)
G36223 NA non-coding downstream 58750 13446047 ~ 13450206 (-)
G36114 NA non-coding downstream 497944 13006516 ~ 13011012 (-)
G36125 NA non-coding downstream 503209 13005499 ~ 13005747 (-)
G36124 NA non-coding downstream 506937 13001731 ~ 13002019 (-)
G36253 NA non-coding upstream 44980 13559218 ~ 13573367 (-)
G36257 NA non-coding upstream 73548 13587786 ~ 13609936 (-)
G36283 NA non-coding upstream 164558 13678796 ~ 13758346 (-)
G36300 NA non-coding upstream 318685 13832923 ~ 13833170 (-)
G36330 NA non-coding upstream 322627 13836865 ~ 13841911 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other downstream 8779 13475166 ~ 13500177 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other downstream 197431 13307088 ~ 13311525 (-)
G36074 NA other downstream 797411 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 1436529 12067533 ~ 12072427 (-)
clrn3 NA other downstream 2425774 11053659 ~ 11083182 (-)
c4h10orf88 LOC103041415 other upstream 1271714 14785952 ~ 14797212 (-)
G36677 NA other upstream 2233162 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2322867 15837105 ~ 15840516 (-)
LOC103043629 LOC108412394 other upstream 3399332 16913570 ~ 16915285 (-)
G37183 NA other upstream 3501890 17016128 ~ 17018918 (-)

Expression


Co-expression Network