get4 (get4)


Basic Information

Item Value
gene id get4
gene name get4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 14823653 ~ 14834347 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260032.3
GGCGGGGTCAGTGCTGGTGTAGCGGTCGCGCGTTTTGCGGGGAGGATGATGTCGGAGCAGGACAGCGCGAAGGGCCGAAATCGCGGCGGAGTGCAGCGGGTGGAGGGCAAGCTCCGGGCCAGCGTAGAGCGGGGAGACTATTATGAAGCCCACCAGATGTACCGCACCTTGTTCTTCAGGTACATGGCCCAGGCGAAGCATGCAGAGGCCCGAGAGCTGATGTACAACGGAGCCCTGTTGTTCTTCAGCTACAACCAGCAAAACAGTGCAGCTGATCTGTCCATGCTGGTGCTAGAGACATTAGAGAAATCTGAGGCCAAAGTAGAAGAAGACATATTAGAGCATTTGGTTAAACTCTTTAGCTTAATGGATCCAAATTCACCTGAGAGGGTGGCATTCGTGTCCAGGGCACTAAAGTGGTCCACAGGGGGCTCGGGCAAGCTGGGCCACCCCAAACTACACCAGCTGCTTGCAGTCACACTCTGGAAAGAACAAAACTACAGTGAGTCACGCTACCACTTTCTGCATTCCTCCGATGGTGAGGGCTGTGCACAGATGCTGGTGGAATATTCGGCCGCCAGGGGCTTCCGCAGCGAGGTGGATATGTTTGTTGCTCAGGCAGTCTTACAGTTCCTCTGCCTAAAGAACAAAACTAGTGCATCAGTGGTCTtcaccacatacacacagaagCACCCATCCATAGAGAAAGGTCCTCCTTTTGTGCAGCCTCTTCTCAACTTCCTCTGGTTCCTCCTCTTAGCAGTGGACGGTGGGAAGCTGACAGTCTTCACAGTGTTATGTGAACAGTATCAACCGTCACTGAAGAGGGACCCCATGTATAATGAGTATCTGGACAGAATAGGACAGCTGTTCTTCGGCATACCACCAAAACAGTCATCGTCATACGGTGGACTACTAGGTAATCTCTTGAACAGTCTAATGGGTTCAGGTGAAgaagaggagggagaggaggcTCAGGAGAACAGCAGCCCCATTGAGCTGGACTGAAAATTGTCCCTCTACAACTGGAGGCGATGTCGTCCTTTTCAAAACTAGCCTCCTGACTTCTCCACcatcccaaaaaaataaaaaaggcaccAAATCAGATTATTCCCTTCTCCACCATCACTGAGAAACCAACAACCCAACCCAAAACTGAAACTCGCTCTCAGCGCATTCAGGACTGACTCAGAACAGAAACTTTCTCCTTCTTCAGCCAGATTGGGGAGGCGTCCTGCAGCTTGAGTGGCTGCGTTTTACGGGATCTTCtccctatttttctttttttgtttttttgctctctTCTTTCGTAGTTTTAAGAAGAGGGTGCCAGTGTGTTGACCATAATGGACTTGTTTTTTTCCCGTGTCAAAAAAAATGAGGGGAAAACAGAACCCAAATACATTTCCATTAACTCACTgaattctgggaaatgtagtccGTTATTTAAGATGGCCGAACCCAGACTCCTGCTCATTTCCAGCCACGACGAGTGAAAGtagttaattaattatgttGCTTATGGAAGTAACAGAATTACTTTTAAACCATTCTAATGTACTTTGATAAGTCTCAGTATGCTACACCAGAGGTGGTGAGCAGCTCCACCGTGTCTCGTCTTACAGGAGAGGTGTTTGCTGTATTTTTATGTTCTGGACTGACTTCACCGCCACTACTCCCGTTATTactgtgtgcgtgcgtgcacGTGTGCATGCATGCGTgcgtgagagagtgtgtatgtgtgtgtgtgcatatatgttGGAGTCGGATGTCAAGACTTTAGCTTGCTGTCCGTAGTATGCTGCTCACCTTTGCAGTCTGAAGCAggtgtttgttcttttttttttcgtctttgCTGAACATTGGAAGaggtcaataataataat
>XM_022669168.1
CATGGTTGCTAACGAAACGATACGCACTTAAAACTGAAGAGTTTGGGGTTTAAATAATTACTCTTCGGCTCAGTTTGGTGATTTACCAACACGCTGCACTGTTTTGCCTTTAATGAGCCATAAAAGCCTCAAATATGAACAGAAATGGGCTTCAGTGAAGCACAGCTGTTAGCCTATCTGGCTAAGATAGCTAGTCACAGCTCTGGCAGTGTCAGTTCAGCCCATTTGATTCCATTCACTGTCAGAATACTTCAGCTAacagagctagttagcttagGTACATGGCCCAGGCGAAGCATGCAGAGGCCCGAGAGCTGATGTACAACGGAGCCCTGTTGTTCTTCAGCTACAACCAGCAAAACAGTGCAGCTGATCTGTCCATGCTGGTGCTAGAGACATTAGAGAAATCTGAGGCCAAAGTAGAAGAAGACATATTAGAGCATTTGGTTAAACTCTTTAGCTTAATGGATCCAAATTCACCTGAGAGGGTGGCATTCGTGTCCAGGGCACTAAAGTGGTCCACAGGGGGCTCGGGCAAGCTGGGCCACCCCAAACTACACCAGCTGCTTGCAGTCACACTCTGGAAAGAACAAAACTACAGTGAGTCACGCTACCACTTTCTGCATTCCTCCGATGGTGAGGGCTGTGCACAGATGCTGGTGGAATATTCGGCCGCCAGGGGCTTCCGCAGCGAGGTGGATATGTTTGTTGCTCAGGCAGTCTTACAGTTCCTCTGCCTAAAGAACAAAACTAGTGCATCAGTGGTCTtcaccacatacacacagaagCACCCATCCATAGAGAAAGGTCCTCCTTTTGTGCAGCCTCTTCTCAACTTCCTCTGGTTCCTCCTCTTAGCAGTGGACGGTGGGAAGCTGACAGTCTTCACAGTGTTATGTGAACAGTATCAACCGTCACTGAAGAGGGACCCCATGTATAATGAGTATCTGGACAGAATAGGACAGCTGTTCTTCGGCATACCACCAAAACAGTCATCGTCATACGGTGGACTACTAGGTAATCTCTTGAACAGTCTAATGGGTTCAGGTGAAgaagaggagggagaggaggcTCAGGAGAACAGCAGCCCCATTGAGCTGGACTGAAAATTGTCCCTCTACAACTGGAGGCGATGTCGTCCTTTTCAAAACTAGCCTCCTGACTTCTCCACcatcccaaaaaaataaaaaaggcaccAAATCAGATTATTCCCTTCTCCACCATCACTGAGAAACCAACAACCCAACCCAAAACTGAAACTCGCTCTCAGCGCATTCAGGACTGACTCAGAACAGAAACTTTCTCCTTCTTCAGCCAGATTGGGGAGGCGTCCTGCAGCTTGAGTGGCTGCGTTTTACGGGATCTTCtccctatttttctttttttgtttttttgctctctTCTTTCGTAGTTTTAAGAAGAGGGTGCCAGTGTGTTGACCATAATGGACTTGTTTTTTTCCCGTGTCAAAAAAAATGAGGGGAAAACAGAACCCAAATACATTTCCATTAACTCACTgaattctgggaaatgtagtccGTTATTTAAGATGGCCGAACCCAGACTCCTGCTCATTTCCAGCCACGACGAGTGAAAGtagttaattaattatgttGCTTATGGAAGTAACAGAATTACTTTTAAACCATTCTAATGTACTTTGATAAGTCTCAGTATGCTACACCAGAGGTGGTGAGCAGCTCCACCGTGTCTCGTCTTACAGGAGAGGTGTTTGCTGTATTTTTATGTTCTGGACTGACTTCACCGCCACTACTCCCGTTATTactgtgtgcgtgcgtgcacGTGTGCATGCATGCGTgcgtgagagagtgtgtatgtgtgtgtgtgcatatatgttGGAGTCGGATGTCAAGACTTTAGCTTGCTGTCCGTAGTATGCTGCTCACCTTTGCAGTCTGAAGCAggtgtttgttcttttttttttcgtctttgCTGAACATTGGAAGaggtcaataataataat

Function

symbol description
get4 Predicted to be involved in protein insertion into ER membrane. Predicted to be part of BAT3 complex. Predicted to be active in cytosol. Orthologous to human GET4 (guided entry of tail-anchored proteins factor 4).

NR:

description
Golgi to ER traffic protein 4 homolog

GO: NA

KEGG:

id description
K23387 GET4; golgi to ER traffic protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260032.3 False 1886 mRNA 0.48 9 14823653 14834347
XM_022669168.1 True 1984 mRNA 0.46 9 14824044 14834347

Neighbor

gene id symbol gene type direction distance location
LOC103041718 LOC108435036 coding upstream 1490 14798910 ~ 14822163 (+)
LOC103041103 htra1,LOC107660481,LOC107745581 coding upstream 48456 14720879 ~ 14775197 (+)
LOC103046321 plekha1 coding upstream 121154 14651650 ~ 14702499 (+)
btbd16 NA coding upstream 178077 14623229 ~ 14645576 (+)
ccser2 NA coding upstream 1193639 13525763 ~ 13630014 (+)
LOC103032486 lrrc3c,lrrc3ca,LOC107598050,LOC107716457,LOC107660473,LOC107678436 coding downstream 133533 14967880 ~ 14991299 (+)
LOC103032173 NA coding downstream 198042 15032389 ~ 15035954 (+)
top2a top2a coding downstream 282477 15116824 ~ 15133253 (+)
gjd3 gjd3 coding downstream 299955 15134302 ~ 15135903 (+)
LOC103030376 raraa,rara,LOC108410801,LOC107678286,LOC107745620,LOC107716487 coding downstream 390105 15224452 ~ 15383888 (+)
G36442 LOC103041415 non-coding upstream 29317 14793471 ~ 14794336 (+)
G36437 NA non-coding upstream 36352 14786050 ~ 14787301 (+)
LOC111192375 NA non-coding upstream 205019 14616723 ~ 14618634 (+)
G36382 LOC108435041,LOC107716480,LOC107660482,LOC107745560 non-coding upstream 233865 14580534 ~ 14589788 (+)
G36372 NA non-coding upstream 344331 14478818 ~ 14479322 (+)
G36499 NA non-coding downstream 203431 15037778 ~ 15037977 (+)
G36503 med24,LOC107716488,LOC107598039,LOC107706820,LOC107678252,LOC107560528 non-coding downstream 218695 15053042 ~ 15064113 (+)
G36510 med24,LOC107716488,LOC107660474 non-coding downstream 243437 15077784 ~ 15081345 (+)
G36511 med24,LOC107598039,LOC107660474 non-coding downstream 247217 15081564 ~ 15083940 (+)
G36512 NA non-coding downstream 252009 15086356 ~ 15090376 (+)
G36439 LOC103041415 other upstream 32820 14789380 ~ 14790833 (+)
LOC107197918 NA other upstream 255741 14564925 ~ 14567912 (+)
G36371 NA other upstream 360014 14463137 ~ 14463639 (+)
LOC103039668 LOC108435045 other upstream 1302951 13502246 ~ 13520702 (+)
G35995 NA other upstream 2120597 12702305 ~ 12703056 (+)
LOC103028998 pyyb,LOC103028998,LOC108410797,LOC107745683,LOC107569181,LOC107684781,LOC107695522,LOC107753323,LOC107560546 other downstream 598482 15432829 ~ 15440157 (+)
cabcoco1 NA other downstream 1379443 16213790 ~ 16233839 (+)
sun1 NA other downstream 2166035 17000382 ~ 17040957 (+)
phf5a phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 other downstream 2367150 17201497 ~ 17205033 (+)
cby1 cby1 other downstream 2398473 17232820 ~ 17234559 (+)

Expression


Co-expression Network