LOC111192346 (gas7)


Basic Information

Item Value
gene id LOC111192346
gene name gas7
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 1784438 ~ 1799673 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022668880.1
GGAGGCGCTGGGTCAGTCCGTGTTGTGCGCGGAGAGCGAGGTGAAGCGCTGCGGGGCTGAGCGGCTGGTTTCCCGGCGGGGTTTGGGACTGAGGAGCGCGGCTGGTCGAGTCTCGAGATTAGTGTGGGAACAGCGCGGGGTTCAGTGATTAATGATACCGTATCGTGTCAGTAAGAAGAAGCTGAATTCGGGTGTTTTTGAGGAAAGCGAGCTGAGCTAACCTGTTGTCAGAGAGCGGCTGGAGAAGTTGGTCATGTCTGGATCGTTCTGTAAAAGTTTGTACGCCTTCAGCGGAGAGCAGCATCAGCAGGGGCTGAAGTTCGAGGTCGGGGAGATGATCAGGATAACCCAGGCTTTACCTGGAGGATGGTGGGAGGGAGAGAAGGACGGAGAGAGGGGATGGTTTCCCTCCAGTTACGTTCAGGTCGTGgagAAGTCTGTGTCCATGAGTGTGTTGCCTGGTGAAGAGCCTTGCCAAAGCCCCCTGCCCAAAGACTGGAAGAGCTACATGTCACCACAAGGACGGAGATACTATGTCAACACGCTAAGCAACGGTGAGCAAACACAAGAAACGAAATATTTTACCACTGCACACATTTAGAAATAGAAAATGTCCTGGAACTCAATCTGTGTC

Function

symbol description
gas7 Enables identical protein binding activity. Predicted to be involved in actin filament polymerization and neuron projection morphogenesis. Predicted to act upstream of or within actin filament bundle assembly; neuron differentiation; and regulation of cell shape. Predicted to be located in ruffle. Predicted to be active in actin filament; cytoplasm; and plasma membrane.

NR:

description
PREDICTED: growth arrest-specific protein 7 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022668880.1 True 634 mRNA 0.53 2 1784438 1799673

Neighbor

gene id symbol gene type direction distance location
LOC103043447 LOC101477534,LOC105888841,LOC102192639,LOC100710639,LOC102295130,LOC103368359 coding upstream 1686 1759608 ~ 1782752 (+)
myocd myocd coding upstream 62536 1598940 ~ 1721902 (+)
LOC103039538 LOC108424875 coding upstream 417920 1260650 ~ 1366518 (+)
foxk2 foxk2,LOC107719587 coding upstream 628267 1138439 ~ 1156171 (+)
wdr45b wdr45b,LOC107598578 coding upstream 646270 1129955 ~ 1138168 (+)
LOC103043879 NA coding downstream 7338 1807011 ~ 1814314 (+)
LOC103042228 chadl,LOC108413512 coding downstream 16565 1816238 ~ 1827981 (+)
trnaq-cug_1 NA coding downstream 37832 1837505 ~ 1837576 (+)
LOC103044365 LOC108273944,LOC108413510 coding downstream 46530 1846203 ~ 1868651 (+)
LOC103046730 desi1 coding downstream 105360 1905033 ~ 1909731 (+)
G33611 map2k4,LOC108424869,LOC108274195,LOC103366173,LOC107719678,LOC107556463 non-coding upstream 48461 1732926 ~ 1735977 (+)
G33609 NA non-coding upstream 52480 1728121 ~ 1731958 (+)
LOC111192343 NA non-coding upstream 227148 1547675 ~ 1557290 (+)
G33511 NA non-coding upstream 439517 1343410 ~ 1344921 (+)
LOC111192399 NA non-coding upstream 563308 1185065 ~ 1221130 (+)
G33623 NA non-coding downstream 69257 1868930 ~ 1871903 (+)
G33737 NA non-coding downstream 228660 2028333 ~ 2030101 (+)
G33747 NA non-coding downstream 285970 2085643 ~ 2087531 (+)
G33748 NA non-coding downstream 288286 2087959 ~ 2088160 (+)
G33754 snf8,LOC107692042,LOC107660854,LOC107734219 non-coding downstream 317894 2117567 ~ 2119530 (+)
LOC111192342 dnah9 other upstream 396419 1369173 ~ 1388019 (+)
trnal-aag NA other upstream 791920 992312 ~ 992518 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other upstream 799057 983167 ~ 985381 (+)
LOC111192417 NA other upstream 1359967 419010 ~ 424471 (+)
hectd2 hectd2,LOC107584154,LOC107594154,LOC107758436,LOC107753452 other upstream 1552521 181069 ~ 231917 (+)
amz2 amz2 other downstream 251069 2050742 ~ 2056963 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 1764357 3564030 ~ 3659132 (+)
G34309 NA other downstream 2371378 4171051 ~ 4178083 (+)
LOC103025551 sema4g other downstream 3082883 4882556 ~ 4924766 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 3892849 5692522 ~ 5756116 (+)

Expression


Co-expression Network