arsg (arsg)


Basic Information

Item Value
gene id arsg
gene name arsg
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 2066377 ~ 2074253 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022668893.1
TACAGCTGATCTGGTACAGAAAGTATAGGagtctctctctggctctgctGGGTGCGGGTGCTGAATTTGACTGGGCTGAGAGTGTGATTTCACATTAAAAATGGCGGACGCTGGATTCTGTGTGCTACTCCTGTGTTGCTCTCTGGTCTCAGGACTGGTGTATTACATCAACAGGAGCTTTGAACATGAAGACAAGATAAAGATCAGCGAGAGGCCCAATTTTATCATTATCCTGGCAGATGATATTGGCTGGGGAGACCTCTGGACAAAGCAGTCCGACAGTACGACACCATGGCTGCACAAGTTAAAGGTGGAAGGCAAaagATTTACTGACTTCCACTCTCCTGCCTCGACGTGCTCTCCGTCACGTGCTGCCCTGCTGACCGGCAGACACGGCTTACGCAACGGAGTCACCCACAACTTTGCAAAAGGTTCTGTTGGAGGTCTTCCACTTAATGAGACCACATTTGCTCAGCTCCTCCGTGATGCAGGCTACTACACTGCCATGATTGGAAAATGGCATCTTGGACACAATGGTCTCTACCATCCAGTCCACAGAGGCTTTGATTATTACCTGGGTATTCCATACAGTAATGACATGGGCTGCACTGACAAGCCAGGCTATGACCTTCCCAGCTGCCCTCCATGTGAACAAAGTCTACATAGCAGCAGGAAGCGTGGGGAATGTGACAGTAAAGTGGCATTACCTCTATTTGAGAACCAGACTATCGTTGAGCAGCCCTTGGACCTGTGGGCCCTGACAGGACGGTATGCTAAAGCTGCAGTCAGGCAGATCCTGACTGCTAGGAATAGGAGGCAGCCTTTCCTGCTGTATGTGGCTCTGGCTCACATGCACGTCCCTCTGTTCCATTACCGCTTTCTAAATGTAACTGGGAAGGATGCCTATTCTGCAAGCCTCAGTGATATGGACAGTTTGGTGGGGTCTATCATGCTTGCCATTGAGGCTTTCAGTGTGGAGAACACACTCATATGGTTTACTGGTGATAATGGACCCTGGGAGCAAAAATGCCAGTTTGCAGGAAGCCCTGGGCCTTTTGTTGGGAGGTGGCAAACCAGCAGAGgtggagGCTCAGCCAAGAGAACGACTTGGGAAGGAGGCCACAGGGTTCCAACAGTGGTCAGCTGGCCTGGGAAGATATCACCTAACACCAACAGCAGCGCACTGCTGAGTGGTTTGGACATCTTTCCTACAGTCCTTTCTCTAGCAGGTGTGGAACCACCATCAGACAGACGTTACGAAGGCATTGACATAACAGATGTTCTGCTCCATGACGCTGACACTGGACATAAGAGTCTCATGCATCCAAACAGTGGAGCAGCAGGGCAATTTGGAGACCTGCAGACTGTGAGGGTGGGACGCTACAAGGCCTTTTACATCACAGgTGGTGCAGAAGCCTGTGGTGGAGGAACTGGAACACCAGAACTTCATGACCCTCCTTTGATTTTTGATCTCGCTAAGGATGAAGCAGAGGAGTCAGTACTGGATCCAGCTAGTGAAGAGTATCAGGCTGTCCTAAAGGACGTGGAACGTGAACGAGAGGCTCTACTGTGGGACATTGCCTTAGACAATGTGTCTATTGCAGACTACACTGTAACACAAGCTGCAGTGCCCTGCTGCCAGACACACAACCCTGCCTGCCGATGCCATGGTTCCAGCTAAACCCTGTAACTGCTAACTAAACAGTTGACCAAACAGCtaattttattcaaaatctTCCAATATACAGTGCTgggaaaaagtaagagaccacttcagtttctgattcagtttctctgattttgctatttataggtatatgtttaata
>XM_022668894.1
AATAGAAGTaagaaattattaatttttaagtcATAAGTGTAACAGAGATTTTCTTTTGACAGATTTCACATTAAAAATGGCGGACGCTGGATTCTGTGTGCTACTCCTGTGTTGCTCTCTGGTCTCAGGACTGGTGTATTACATCAACAGGAGCTTTGAACATGAAGACAAGATAAAGATCAGCGAGAGGCCCAATTTTATCATTATCCTGGCAGATGATATTGGCTGGGGAGACCTCTGGACAAAGCAGTCCGACAGTACGACACCATGGCTGCACAAGTTAAAGGTGGAAGGCAAaagATTTACTGACTTCCACTCTCCTGCCTCGACGTGCTCTCCGTCACGTGCTGCCCTGCTGACCGGCAGACACGGCTTACGCAACGGAGTCACCCACAACTTTGCAAAAGGTTCTGTTGGAGGTCTTCCACTTAATGAGACCACATTTGCTCAGCTCCTCCGTGATGCAGGCTACTACACTGCCATGATTGGAAAATGGCATCTTGGACACAATGGTCTCTACCATCCAGTCCACAGAGGCTTTGATTATTACCTGGGTATTCCATACAGTAATGACATGGGCTGCACTGACAAGCCAGGCTATGACCTTCCCAGCTGCCCTCCATGTGAACAAAGTCTACATAGCAGGAAGCGTGGGGAATGTGACAGTAAAGTGGCATTACCTCTATTTGAGAACCAGACTATCGTTGAGCAGCCCTTGGACCTGTGGGCCCTGACAGGACGGTATGCTAAAGCTGCAGTCAGGCAGATCCTGACTGCTAGGAATAGGAGGCAGCCTTTCCTGCTGTATGTGGCTCTGGCTCACATGCACGTCCCTCTGTTCCATTACCGCTTTCTAAATGTAACTGGGAAGGATGCCTATTCTGCAAGCCTCAGTGATATGGACAGTTTGGTGGGGTCTATCATGCTTGCCATTGAGGCTTTCAGTGTGGAGAACACACTCATATGGTTTACTGGTGATAATGGACCCTGGGAGCAAAAATGCCAGTTTGCAGGAAGCCCTGGGCCTTTTGTTGGGAGGTGGCAAACCAGCAGAGgtggagGCTCAGCCAAGAGAACGACTTGGGAAGGAGGCCACAGGGTTCCAACAGTGGTCAGCTGGCCTGGGAAGATATCACCTAACACCAACAGCAGCGCACTGCTGAGTGGTTTGGACATCTTTCCTACAGTCCTTTCTCTAGCAGGTGTGGAACCACCATCAGACAGACGTTACGAAGGCATTGACATAACAGATGTTCTGCTCCATGACGCTGACACTGGACATAAGAGTCTCATGCATCCAAACAGTGGAGCAGCAGGGCAATTTGGAGACCTGCAGACTGTGAGGGTGGGACGCTACAAGGCCTTTTACATCACAGgTGGTGCAGAAGCCTGTGGTGGAGGAACTGGAACACCAGAACTTCATGACCCTCCTTTGATTTTTGATCTCGCTAAGGATGAAGCAGAGGAGTCAGTACTGGATCCAGCTAGTGAAGAGTATCAGGCTGTCCTAAAGGACGTGGAACGTGAACGAGAGGCTCTACTGTGGGACATTGCCTTAGACAATGTGTCTATTGCAGACTACACTGTAACACAAGCTGCAGTGCCCTGCTGCCAGACACACAACCCTGCCTGCCGATGCCATGGTTCCAGCTAAACCCTGTAACTGCTAACTAAACAGTTGACCAAACAGCtaattttattcaaaatctTCCAATATACAGTGCTgggaaaaagtaagagaccacttcagtttctgattcagtttctctgattttgctatttataggtatatgtttaata

Function

symbol description
arsg Predicted to enable arylsulfatase activity. Human ortholog(s) of this gene implicated in Usher syndrome. Orthologous to human ARSG (arylsulfatase G).

NR:

description
PREDICTED: arylsulfatase G

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K12381 ARSG; arylsulfatase G

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022668893.1 True 1827 mRNA 0.49 12 2066377 2074253
XM_022668894.1 False 1800 mRNA 0.48 11 2067237 2074253

Neighbor

gene id symbol gene type direction distance location
LOC103022306 LOC108444258,LOC108273768,LOC107734232,LOC107660858,LOC107584085 coding upstream 16588 2043565 ~ 2049789 (+)
LOC103047034 shisa8 coding upstream 99037 1930168 ~ 1967340 (+)
LOC103046730 desi1 coding upstream 156646 1905033 ~ 1909731 (+)
LOC103044365 LOC108273944,LOC108413510 coding upstream 197726 1846203 ~ 1868651 (+)
trnaq-cug_1 NA coding upstream 228801 1837505 ~ 1837576 (+)
LOC103025124 si:dkey-220f10.4,LOC108444253,LOC107692044,LOC107660871,LOC107554063,LOC102785326 coding downstream 14304 2088557 ~ 2097830 (+)
LOC103026481 stx4,LOC103026481,LOC108444263,LOC108274127,LOC106579303 coding downstream 24902 2099155 ~ 2107129 (+)
calcoco2 NA coding downstream 34218 2108471 ~ 2117195 (+)
LOC103026968 LOC108444266 coding downstream 51367 2125620 ~ 2130212 (+)
LOC103028296 LOC108444267 coding downstream 60943 2135196 ~ 2148906 (+)
G33737 NA non-coding upstream 36276 2028333 ~ 2030101 (+)
G33623 NA non-coding upstream 194474 1868930 ~ 1871903 (+)
G33611 map2k4,LOC108424869,LOC108274195,LOC103366173,LOC107719678,LOC107556463 non-coding upstream 330400 1732926 ~ 1735977 (+)
G33609 NA non-coding upstream 334419 1728121 ~ 1731958 (+)
LOC111192343 NA non-coding upstream 509087 1547675 ~ 1557290 (+)
G33747 NA non-coding downstream 11390 2085643 ~ 2087531 (+)
G33748 NA non-coding downstream 13706 2087959 ~ 2088160 (+)
G33754 snf8,LOC107692042,LOC107660854,LOC107734219 non-coding downstream 43314 2117567 ~ 2119530 (+)
G33788 NA non-coding downstream 49634 2123887 ~ 2124173 (+)
G33791 chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 non-coding downstream 56421 2130674 ~ 2134078 (+)
amz2 amz2 other upstream 9414 2050742 ~ 2056963 (+)
LOC111192342 dnah9 other upstream 678358 1369173 ~ 1388019 (+)
trnal-aag NA other upstream 1073859 992312 ~ 992518 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other upstream 1080996 983167 ~ 985381 (+)
LOC111192417 NA other upstream 1641906 419010 ~ 424471 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 1489777 3564030 ~ 3659132 (+)
G34309 NA other downstream 2096798 4171051 ~ 4178083 (+)
LOC103025551 sema4g other downstream 2808303 4882556 ~ 4924766 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 3618269 5692522 ~ 5756116 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 4172393 6246646 ~ 6258050 (+)

Expression


Co-expression Network