LOC103045303


Basic Information

Item Value
gene id LOC103045303
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5765856 ~ 5771877 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022668957.1
CCTTTAAAACACACTATAAGGAGGTGTGTGCTGTTTGTTGGGGCAGAATAAAGAATCAATGCTGTGGGCTAATGATTACCAGCCTGAGAGACGAGAGATACCCATGAATTTCTGAGAAGTGACTTTAGGAATCAAAGCTTCAGTGCTGTATTGGATTATCTCCTGAATACTGTCCAGTATTTCCAGCACCATGATCCCACTGCTGCTGTTACTGCTGGGCCTGCAGAGCTTCAGTCAGCCTGCAGTAGCAGCTGAGACCACGTTCTGGGATGCTTTGAGTGCTATAGCTGATGcacttACTGATTATTCCTAcgactacactgaggaacccacTGAACTGGATGCAACTATTGACAGCACTGTTGACTGGCTGTTTGCTCTCTTAGATGAGGAAGATGTGTGTGACCCAAACCCTTGTCTCAACAATGGAACCTGTGAGACTGGAACTGATGGCCATTACAAATGCACCTGCCCCCGACCTTTCATAGGCAAAAAGTGTCAAGATGttgagAATGTGTGTAAGAATGTTAACTGTGGTAAAGGCGAGTGTGTGCGCATTCCAACAGAGCCCTTTTATGAGTGCAAGTGTAGATCCCCCTACCGGCCCCCCAGGTGCAAGAAACCTTCACCCTGTAGGCCCAGCCCCTGTTTGAATGGTGGGACGTGTGTTAAAGGGGGTAAAAGAagctttaagtgtgtgtgtcctgACAACTATACCGGAAAATTCTGCCAAGTTGGTCCTGATGACTGTTATGAAGGAGATGGAGAATCCTACAGAGGATTTGTAACTGAAACAGTGAGTGAACTGGAGTGTTTACCCTGGAACTCTCACCTCTTACCATACAGTGACTTTAATGAAGACGATGATGGAGTCGGACCTCATAACTACTGCAGGAACCCAGATGGGGAGAGCCAGCCCTGGTGCTTCGTCAGATACCAGGGAAAGCTGCAGTGGGATGACTGTAATGTCAGACAGTGCCCAGAAGCAGTTACCACAACCAGCACAGAAGGAGCGTATCCGGCAGTGTTCACTACAGCTCTCCCGAAGAAGGACTTCTCTGTGTGTGGGAAGTCTCAGCCTGCCAGGGCTATGGCTAAGATCTTTGGTGGGAGAAAAGCTCGACCTGGAGCTCATCCCTGGCAGGCCTCTCTACAGGCTCGCCGCAAGCGCAGTGCTGAGGCCTTCCGTCACATATGTGGAGGAATACTAATCGACTCCTGCTGGGTCCTCACTGCAGCTCACTGCATTGAAAGAATGAATGAGATGCAGGTGAATCTGGGTGGAGTGAACCTGGACAAAGACGAGGCTGCAGATCAGACATTTGATGTGGAAAATTATGCCGTTCATGAAAACTACACAGAGTCTGAAGATGCCCTCTACAATGACATAGCTCTGCTGAAGCTGAAGGCAGTAGATGGGCAGTGTGCCAGAGAGACCAAGTTCGTAAAGGCTGCCTGTCTGCCCACTGGTCCAATCCCTGATGGAACAGAGTGCACTATATCAGGATATGGAGTCACTGAGCACGATGAAGAAGGTTCCAAACAGCTGCTGGAGGCAAAAGTTCTCCTGATCTCTCAGAAGCAATGCATGGCTCCTCATGTCCATGGGGACGTGATGGATAATGGCATGTTCTGTGCTGGACACATGAAAGGAGGAGTGGACTCCTGCCAGGGAGACTCTGGGGGTCCTCTGGTCTGTAAGCAGAATGGCACATATTATATTTATGGCGTGGTGAGCTGGGGTGATGCCTGTGGCAAGAAGAATAAACCTGGAGTGTATGCCCGAGTAACTCACTTCCTCGACTGGATCAATGAAAAGATGCGctccttataaaacagaaccacAAGGAGATCATATAAACCAGGGATGAACATCAGGACATCAGCCTCAAGTTGCTGTGCAGCTTCTACAAAACCTTTATTTCTAGATTTCATGATCATAAATCATACATCAAGCAGGAACTCTTAATTCACAAAGCTGAACCTGTCAGGCATACAGTATATCAAATATATCtgaaatataacaattctgccgTTGGCAGTCTAAACAGTTATTCGTCCACCTGTGACTTTTCACAGcagtcatttgtttattttttctttctacagaatggcaatgttaaataaagtttcatcactatttaaaa

Function

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K08648 HABP2; hyaluronan binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022668957.1 True 2147 mRNA 0.47 13 5765856 5771877

Neighbor

gene id symbol gene type direction distance location
LOC107197899 NA coding upstream 974 5758072 ~ 5764882 (+)
cpn1 cpn1,LOC107722209,LOC107684044,LOC107702463 coding upstream 81693 5669067 ~ 5684163 (+)
LOC103038312 NA coding upstream 112179 5642317 ~ 5653677 (+)
gpam gpam,LOC107702461,LOC107755524,LOC107566297,LOC107581571,LOC107722223 coding upstream 124061 5615695 ~ 5641795 (+)
LOC103039360 LOC108426428 coding upstream 158465 5596081 ~ 5607391 (+)
casp7 casp7 coding downstream 35285 5807162 ~ 5819997 (+)
LOC107197901 NA coding downstream 52511 5824388 ~ 5828009 (+)
plekhs1 NA coding downstream 57757 5829634 ~ 5841843 (+)
nhlrc2 nhlrc2 coding downstream 81030 5852907 ~ 5875214 (+)
adrb1 adrb1 coding downstream 115167 5887044 ~ 5891991 (+)
G34615 NA non-coding upstream 23412 5739614 ~ 5742444 (+)
G34606 NA non-coding upstream 105954 5659266 ~ 5659902 (+)
G34605 NA non-coding upstream 106657 5658969 ~ 5659199 (+)
G34587 vti1a,LOC107566351,LOC107702459 non-coding upstream 194175 5400955 ~ 5571681 (+)
G34580 NA non-coding upstream 379678 5385883 ~ 5386178 (+)
G34602 NA non-coding downstream 16881 5788758 ~ 5793818 (+)
G34636 dclre1a non-coding downstream 73025 5844902 ~ 5847925 (+)
G34644 ccdc186,LOC107755417,LOC107566113 non-coding downstream 142364 5914241 ~ 5916402 (+)
G34657 NA non-coding downstream 194811 5966688 ~ 5967194 (+)
G34790 NA non-coding downstream 270969 6042846 ~ 6043340 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other upstream 9740 5692522 ~ 5756116 (+)
LOC103025551 sema4g other upstream 841090 4882556 ~ 4924766 (+)
G34309 NA other upstream 1587773 4171051 ~ 4178083 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other upstream 2106724 3564030 ~ 3659132 (+)
amz2 amz2 other upstream 3708893 2050742 ~ 2056963 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 474769 6246646 ~ 6258050 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other downstream 730268 6502145 ~ 6541460 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other downstream 820730 6592607 ~ 6663607 (+)
G34931 NA other downstream 959077 6730954 ~ 6731424 (+)
G35021 NA other downstream 1130540 6902417 ~ 6903997 (+)

Expression


Co-expression Network