glrx3 (glrx3,LOC107745700)


Basic Information

Item Value
gene id glrx3
gene name glrx3,LOC107745700
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12073363 ~ 12094731 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669102.1
GGGAATCGATGAGCGGATACTTTTGTCTGTGATCATGGCGAACCTGACGGACGCAGCGACGCCGAAGCAGTTTGAGGAGCTGCTAAAAAATGCCGGCAGGTCTCTCACAGTTGTCCATTTCCACGCACCATGGGCTCCACAATGCTCTCAGATGAACGATGTGATGAAGGAGTTAGCCAAGGAGCACAAACAGACCATGTTGTCATGcTGGAGGCTGAAGCAGTCCCTGAGGTGTCTGAGAAATATGAGATCAGCTCAGTTCCTACGTTCCTCTTTTTCAAGGGTGGCGAGAAGATTGACAGGCTGGATGGCGCGCATGCCCCTGAGCTGACCAATAAGGTGCAGCGGCTGGCATCCAGTGGGGGTGGGCCTGCCGGGGTGGGAGATGTCCCTAAAGAGGAGCTTAACAAGAGACTGAAGAAACTCATCAACGCTGCGCCCTGCATGCTGTTCATGAAGGGATCGCCCCAGGAGCCACGCTgcggCTTCAGCAGACAGATCGTGCAGATTCTAAAGGACCGCAGCATCCAGTACAGCAGTTTCGATATCCTGTCTGATGAGGAGGTGCGACAGGGGCTAAAGACCTACTCCAACTGGCCCACCTACCCTCAGGTGTACGTTAATGGAGAGCTGGTTGGGGGGCTGGACATTGTCAAGgaGCTGGTAGAATCTGGCGAGATTGAGAATACCTTCCCAAAGACAGTCACACTGGAGCatagGTTGAAGGCTCTCGTAAATAAATGTCCCATCATGCTCTTCATGAAAGGAAATAAAGAGGTCGCCAAATGTGGATTCAGCCGGCAGATACTTGAAATAATGAACAACGCAGGggttGAATACGACACCTTTGATATTCTTCAGGACGAGGAGGTTAGGCAGGGCCTTAAGGCATATTCCAACTGGCCCACATACCCACAGCTGTATGTAAAAGGAGAGCTGATTGGAGGCCTGGATATTATTAAGGAGCTGAAGGAGAATGGTGAGCTGGAGTCAGTGCTCAGAGGAGAAAACTGAGAGAGGAGACGGGAACAAAGATACGCTGaagtctctgctgctgctgctgaggacATCGGAGACACGTCCAAGAGGTCACAAGGGGGACACAGCCGTCATATTCCAGCCAGTTAATTTCTTTTTGGAGATCAGCTAGTACCGGAACTGCTGTATAATTGTCCATGATCTGGCTATATGTGAAAAATAAGTCCAATAAAGACATTGCCACAGAGATAATAATCCA
>XM_022669103.1
GGGAATCGATGAGCGGATACTTTTGTCTGTGATCATGGCGAACCTGACGGACGCAGCGACGCCGAAGCAGTTTGAGGAGCTGCTAAAAAATGCCGGCAGGTCTCTCACAGTTGTCCATTTCCACGCACCATGGGCTCCACAATGCTCTCAGATGAACGATGTGATGAAGGAGTTAGCCAAGGAGCACAAACAGAtctctttttcacagcTGGAGGCTGAAGCAGTCCCTGAGGTGTCTGAGAAATATGAGATCAGCTCAGTTCCTACGTTCCTCTTTTTCAAGGGTGGCGAGAAGATTGACAGGCTGGATGGCGCGCATGCCCCTGAGCTGACCAATAAGGTGCAGCGGCTGGCATCCAGTGGGGGTGGGCCTGCCGGGGTGGGAGATGTCCCTAAAGAGGAGCTTAACAAGAGACTGAAGAAACTCATCAACGCTGCGCCCTGCATGCTGTTCATGAAGGGATCGCCCCAGGAGCCACGCTgcggCTTCAGCAGACAGATCGTGCAGATTCTAAAGGACCGCAGCATCCAGTACAGCAGTTTCGATATCCTGTCTGATGAGGAGGTGCGACAGGGGCTAAAGACCTACTCCAACTGGCCCACCTACCCTCAGGTGTACGTTAATGGAGAGCTGGTTGGGGGGCTGGACATTGTCAAGgaGCTGGTAGAATCTGGCGAGATTGAGAATACCTTCCCAAAGACAGTCACACTGGAGCatagGTTGAAGGCTCTCGTAAATAAATGTCCCATCATGCTCTTCATGAAAGGAAATAAAGAGGTCGCCAAATGTGGATTCAGCCGGCAGATACTTGAAATAATGAACAACGCAGGggttGAATACGACACCTTTGATATTCTTCAGGACGAGGAGGTTAGGCAGGGCCTTAAGGCATATTCCAACTGGCCCACATACCCACAGCTGTATGTAAAAGGAGAGCTGATTGGAGGCCTGGATATTATTAAGGAGCTGAAGGAGAATGGTGAGCTGGAGTCAGTGCTCAGAGGAGAAAACTGAGAGAGGAGACGGGAACAAAGATACGCTGaagtctctgctgctgctgctgaggacATCGGAGACACGTCCAAGAGGTCACAAGGGGGACACAGCCGTCATATTCCAGCCAGTTAATTTCTTTTTGGAGATCAGCTAGTACCGGAACTGCTGTATAATTGTCCATGATCTGGCTATATGTGAAAAATAAGTCCAATAAAGACATTGCCACAGAGATAATAATCCA

Function

symbol description
glrx3 Predicted to enable iron-sulfur cluster binding activity; metal ion binding activity; and protein-disulfide reductase activity. Acts upstream of or within hemoglobin metabolic process and iron ion homeostasis. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in brain; eye; heart; and intermediate cell mass of mesoderm. Orthologous to human GLRX3 (glutaredoxin 3).

NR:

description
PREDICTED: glutaredoxin-3

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005938 cell cortex cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669102.1 False 1237 mRNA 0.51 11 12073363 12094731
XM_022669103.1 True 1238 mRNA 0.50 11 12073363 12094731

Neighbor

gene id symbol gene type direction distance location
ptpre ptpre,LOC103359937,LOC107387775 coding upstream 855991 11184890 ~ 11217372 (+)
foxi2 foxi2 coding upstream 1030470 11040698 ~ 11042893 (+)
trim65 trim65 coding upstream 1587565 10476390 ~ 10485798 (+)
LOC103039374 NA coding upstream 1631425 10437323 ~ 10441938 (+)
cdc42ep4 NA coding upstream 1649118 10385012 ~ 10424245 (+)
jakmip3 jakmip3 coding downstream 509226 12603957 ~ 12664928 (+)
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding downstream 576814 12671545 ~ 12692068 (+)
LOC103039392 chmp6b,chmp6,LOC108429718,LOC107749864,LOC107684156,LOC107755461,LOC107690936 coding downstream 609607 12704338 ~ 12710368 (+)
LOC103024023 LOC108273716,LOC108429130,LOC107690938 coding downstream 622922 12717653 ~ 12831319 (+)
tekt3 tekt3,LOC107753251,LOC107684491 coding downstream 870051 12964782 ~ 12976020 (+)
G35931 NA non-coding upstream 963 12070195 ~ 12072400 (+)
G35913 NA non-coding upstream 222023 11851124 ~ 11851340 (+)
G35912 NA non-coding upstream 223615 11849532 ~ 11849748 (+)
G35908 NA non-coding upstream 251055 11821892 ~ 11822308 (+)
LOC111192404 NA non-coding upstream 630695 11440412 ~ 11442668 (+)
G35971 NA non-coding downstream 365043 12459774 ~ 12461856 (+)
G35977 NA non-coding downstream 474447 12569178 ~ 12569580 (+)
G35973 NA non-coding downstream 475382 12570113 ~ 12572345 (+)
G35974 NA non-coding downstream 479184 12573915 ~ 12575448 (+)
G35984 ppp2r2d,LOC105009682,LOC107553689 non-coding downstream 492167 12586898 ~ 12602796 (+)
G35903 NA other upstream 271159 11801458 ~ 11802204 (+)
dock1 dock1,LOC107740868 other upstream 1071558 10747637 ~ 11001805 (+)
G35744 mrpl38 other upstream 1597580 10471380 ~ 10475783 (+)
LOC103024481 adamts14,LOC103367006 other upstream 3221971 8719354 ~ 8851392 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other upstream 3600374 8442132 ~ 8472989 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other downstream 16959 12111690 ~ 12566941 (+)
G35967 NA other downstream 271809 12366540 ~ 12370962 (+)
G35995 NA other downstream 607574 12702305 ~ 12703056 (+)
LOC103039668 LOC108435045 other downstream 1407515 13502246 ~ 13520702 (+)
G36371 NA other downstream 2368406 14463137 ~ 14463639 (+)

Expression


Co-expression Network