Gene
RNA
| Item | Value |
|---|---|
| gene id | G52557 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 3049098 ~ 3049653 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59878 | True | 556 | lncRNA | 0.35 | 1 | 3049098 | 3049653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_03009238_03025860 | NA | coding | downstream | 23161 | 3008360 ~ 3025937 (-) |
| CI01000009_03006152_03007243 | NA | coding | downstream | 41243 | 3005386 ~ 3007855 (-) |
| CI01000009_02975388_02982670 | NA | coding | downstream | 63707 | 2975388 ~ 2985391 (-) |
| CI01000009_02916137_02917550 | FUNDC1 | coding | downstream | 131548 | 2915641 ~ 2917550 (-) |
| CI01000009_02904768_02914992 | EFHC2 | coding | downstream | 133851 | 2904691 ~ 2915247 (-) |
| CI01000009_03140599_03143635 | SLC35A5 | coding | upstream | 90946 | 3140599 ~ 3143635 (-) |
| CI01000009_03171440_03194494 | DCAF6 | coding | upstream | 121787 | 3171440 ~ 3195145 (-) |
| CI01000009_03226613_03234223 | ME3.L, ME3 | coding | upstream | 176115 | 3225768 ~ 3234223 (-) |
| CI01000009_03235111_03242103 | NA | coding | upstream | 185361 | 3235014 ~ 3242103 (-) |
| CI01000009_03244366_03259106 | ILDR2 | coding | upstream | 193945 | 3243598 ~ 3259106 (-) |
| G52556 | NA | non-coding | downstream | 3001 | 3045889 ~ 3046097 (-) |
| G52503 | NA | non-coding | downstream | 15421 | 3027695 ~ 3033677 (-) |
| G52553 | NA | non-coding | downstream | 53193 | 2995649 ~ 2995905 (-) |
| G52489 | NA | non-coding | downstream | 135753 | 2913118 ~ 2913345 (-) |
| G52566 | NA | non-coding | upstream | 21508 | 3071161 ~ 3071388 (-) |
| G52518 | NA | non-coding | upstream | 32338 | 3081991 ~ 3082437 (-) |
| G52589 | NA | non-coding | upstream | 98275 | 3147928 ~ 3149432 (-) |
| G52494 | NA | non-coding | upstream | 100610 | 3150263 ~ 3156146 (-) |
| G52496 | NA | non-coding | upstream | 153112 | 3202765 ~ 3207426 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 149691 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 486565 | 2551724 ~ 2562533 (-) |
| G52098 | NA | other | downstream | 1641471 | 1401932 ~ 1407627 (-) |
| CI01000009_03261739_03262843 | NA | other | upstream | 211550 | 3261038 ~ 3262843 (-) |
| G52828 | NA | other | upstream | 1167767 | 4217420 ~ 4231469 (-) |
| G53515 | NA | other | upstream | 2452742 | 5502395 ~ 5505248 (-) |
| G55814 | NA | other | upstream | 5376168 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 5808499 | 8856310 ~ 8860563 (-) |
