LOC103046869


Basic Information

Item Value
gene id LOC103046869
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18100566 ~ 18117853 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669247.1
GTTTCTTATAAAGTCTTACCACAGAGACGTCAGGGTCATTTTCAACAAGCTGCGCTTCCTTTACTGACTGTTTAGTTGGAGTAAGATGGACTGGGTTTATTTGCTGACTCTGGCTGCTCTTCTTTACCAGGACTCTCATGGGCAGTTAGATGTGTGTGGCACCACTGGGATTAACAGCAGGATAGTAGGAGGTCATGATGCCGCAGCAGAGAGCTGGCCCTGGCAGGCGAGTCTGCATCTGTTCGGAGGGCACTTGTGCGGAGGTTCCCTCATCAATAAAGAATGGGTGCTGTCTGCAGCACACTGCTTCTACTCAGGATCCAATGCAGCAAGCTGGACTGTGTTTCTGGGACGTCAAAGTCAAGAAGGCGTGAACCCAAATGAGGTCTCCAGACGAGTCTCTGTGATAATCCTGCACCCTGACTACGACTCCGACACGGAAGATAACGATATTGCTCTACTCAAACTGAGCAGCCCGGTCAACTTCACCAGATACATCAGACCAGTGTGCCTGGCATCAGATAGCAGTGTTTTTCACAGCGGGACAGAGAGCTGGGTCACTGGATGGGGAGACGTGGCATTTGGTGTGCCTCTTCCGTCTCCACAGACTTTACAGGAGGTGGAGGTTCCAGTTGTGGGAAACAGGCAGTGTAACTGTTTTTACGGTGTTGGAACAATCACAAACAACATGATATGCGCTGGTTTACTGGAAGGAGGAAGAGACTCATGTCAGGGAGACTCGGGAGGTCCGATGGTGAGCAGGCAGGGCTCGGTGTGGGTTCAGGCCGGTGTGGTGAGTTTCGGCTATGATTGTGCTCAGCCTGAGTTTCCTGGAGTTTACACCAGAGTGTCCCGCTACCAAACCTGGATCAGCTCTCTGATCACCAGCGACCCTCCAGGATTCATCCAGTTCCAGTCCAGTGGAGTCGACCCTGACAGATCATACACCTGCCCTGGCCTGCCGCCACCAGTGACTGACACCCCGGAAATCTCCACAGTGGCTCCAGCCACGGAGAACCAGTCATCTACTGTTTGTGGTAGTGTCCCGCTCCTGTCCAGGATAGTAGGAGGTCAGGACGCCCCCGCTGGACGCTGGCCATGGCAGGCGAGCCTACACTGGAACAGATTTCATGCTTGTGGGGGTTCTCTTATTAACAGGGAATGGGTTCTGTCTGCAGCTCACTGTTTCTTCAGCTCCAGTACATCTGAGTGGACTGTGTATCTCGGTCGGCAGAGTCAGGAGGACGACAACCCCAACGAATTGTTCAGAAGTGTGGATGTGATCATCACACATCCTGATTACGACTTTAACGCTGCCGAGAATGATAACGATATGGCTCTGCTGAAGCTGAGTGCTCCGGTTATCTTCACTGACTACATCCGGCCGGTGTGTCTGGCAGCAGACAGCAGTGTTTTCCACACGGGAACAGACAGCTGGGTCACCGGCTGGGGGGACGTTCGGGAAGACGTGCCGCTTCCCTCTCCTCAGACTCTACAGGAAGTGGAAGTGCCTGTAGTGGGAAACAGACAGTGCCGCTGCCTCTACAGGAACACTGCAGCCGTCACAGATAACATGATCTGCGCCGGCCTGCTGGAGGGAGGCAGAGACTCCTGTCAGCGAGACTCTGGAGGTCCGATGGTGAGCAGGCAGGGCTCGGTGTGGGTTCAGGCCGGTGTGGTGAGTTTCGGCTATGGTTGTGCTCAGCCTGGGTTTCCTGGAGTTTACACCAGAGTGTCCCGCTACCAAACCTGGATCAGCTCTCTGATCACCAGCGACCCTCCAGGATTCATCCAGTTCCAGACCAGTGGAGTCGACCCTGACAGATCATACACCTGCAGCACCAGCGCCCCACCGAGGTCCAGCTCCGTCTCCCAGCAGCACGGGTGTGGAGAGGCCCCTGGAGGAGGAGGGGTGTGGCCCTGGATGGTCAGCCTGCAGTGGAACGGGTTACACATGTGCACCGCCTCGCTGCTGAGCGCTGATTTCATCATGACCACCGCATCCTGCCTTTCAGATTTTTCCCAGAATGCCAGTGGCTGGAGAGCGTCTTTAGGCTATCAGTCTAACAGAAACAGCTCAGATCCTTTCCTGCTCTCTGTGGCTGTGATAAATATCACCCTCAGTAACCTGAACCACGGGCTGAACATCTCCGTGCTGCAGCTGGAGGAGCCGGTGGAGTTCAGTGATCTCGTCCAGCCTGTGTGTTTGGACCTGGATAACCGGAGGAGCTTTCCCCCCGGGTTAACCTGCTTATTCACCGgctataaaaataacaattctACAGGTTTAGTGCTGGAGGAGCAGCAGGTGACAGTAATGGACTGTGGTAGAAacctctcctcatctgagtccATCTGCACTGGATCTCTGTCTCCTAAACAGgatGGTGTAGGAGGGGTGTTAGCGTGTGTATCAGGTGTGTCCTGGTTTCAGGTGGGTGTGATTATGTTGGATTATGGAGATTCAGGACTGCAGGTTTTCTCCAGGGTCTCTCAGTTTGGGAATTTCCTCCAGAGAACTGTCCCTGATCTTCCTCAGCCGCCCACCGTCGCCCCCTTACCCTCCAACCACGAGACCCCCCCATCAGCGGGGGCTCCGCTAGCTCCCATATCCTGTTACAGAAATGCTATTGTCTTTACTGTCttagtattgttattattatcataaaaaCTGTGACATGGGCGAAACTGTGAACCCTGATCTCACCAACCGAGTTTTTATATCATCTGTAACATTATTAACTATGATACTGTTATATAAGTCTGTGTTCAGATAAAGTAAATCTGATGATCTGTGTTAGTTGTTGCAGAATAGGGTTATTACTATGTTACCCATGCCTATGTTACTAAGCTTGGATAAATGAGTTGTACACAAAATGCATAGCTACTCCAGGCATCACATCCTGCAAAAACTCTTTTTAGAAAGGTAGCATTAAGAATACTAACCAAACAAAGTTATTCTTCAAAAATAGcctttaaaaactcatttaaacatacaaatgcatgcaaagtgaatttaagagcaaTAAAActtactacaataaaataaaatatcaaaactgcacaaaataaggCCACGCAATTATATATTTCACTTAtctgcatatctctgcattcagaatacattagtaagaaactctctctgtctcaattTTCCAATATAAGAGACGAGTACAAATTCAGATGAGccctaattatttttaatacatttttttaaatatatt
>XM_022669248.1
AGTTTCTTATAAAGTCTTACCACAGAGACGTCAGGGTCATTTTCAACAAGCTGCGCTTCCTTTACTGACTGTTTAGTTGGAGTAAGATGGACTGGGTTTATTTGCTGACTCTGGCTGCTCTTCTTTACCAGGACTCTCATGGGCAGTTAGATGTGTGTGGCACCACTGGGATTAACAGCAGGATAGTAGGAGGTCATGATGCCGCAGCAGAGAGCTGGCCCTGGCAGGCGAGTCTGCATCTGTTCGGAGGGCACTTGTGCGGAGGTTCCCTCATCAATAAAGAATGGGTGCTGTCTGCAGCACACTGCTTCTACTCAGGATCCAATGCAGCAAGCTGGACTGTGTTTCTGGGACGTCAAAGTCAAGAAGGCGTGAACCCAAATGAGGTCTCCAGACGAGTCTCTGTGATAATCCTGCACCCTGACTACGACTCCGACACGGAAGATAACGATATTGCTCTACTCAAACTGAGCAGCCCGGTCAACTTCACCAGATACATCAGACCAGTGTGCCTGGCATCAGATAGCAGTGTTTTTCACAGCGGGACAGAGAGCTGGGTCACTGGATGGGGAGACGTGGCATTTGGTGTGCCTCTTCCGTCTCCACAGACTTTACAGGAGGTGGAGGTTCCAGTTGTGGGAAACAGGCAGTGTAACTGTTTTTACGGTGTTGGAACAATCACAAACAACATGATATGCGCTGGTTTACTGGAAGGAGGAAGAGACTCATGTCAGGGAGACTCGGGAGGTCCGATGGTGAGCAGGCAGGGCTCGGTGTGGGTTCAGGCCGGTGTGGTGAGTTTCGGCTATGATTGTGCTCAGCCTGAGTTTCCTGGAGTTTACACCAGAGTGTCCCGCTACCAAACCTGGATCAGCTCTCTGATCACCAGCGACCCTCCAGGATTCATCCAGTTCCAGTCCAGTGGAGTCGACCCTGACAGATCATACACCTGCCCTGGCCTGCCGCCACCAGTGACTGACACCCCGGAAATCTCCACAGTGGCTCCAGCCACGGAGAACCAGTCATCTACTGTTTGTGGTAGTGTCCCGCTCCTGTCCAGGATAGTAGGAGGTCAGGACGCCCCCGCTGGACGCTGGCCATGGCAGGCGAGCCTACACTGGAACAGATTTCATGCTTGTGGGGGTTCTCTTATTAACAGGGAATGGGTTCTGTCTGCAGCTCACTGTTTCTTCAGCTCCAGTACATCTGAGTGGACTGTGTATCTCGGTCGGCAGAGTCAGGAGGACGACAACCCCAACGAATTGTTCAGAAGTGTGGATGTGATCATCACACATCCTGATTACGACTTTAACGCTGCCGAGAATGATAACGATATGGCTCTGCTGAAGCTGAGTGCTCCGGTTATCTTCACTGACTACATCCGGCCGGTGTGTCTGGCAGCAGACAGCAGTGTTTTCCACACGGGAACAGACAGCTGGGTCACCGGCTGGGGGGACGTTCGGGAAGACGTGCCGCTTCCCTCTCCTCAGACTCTACAGGAAGTGGAAGTGCCTGTAGTGGGAAACAGACAGTGCCGCTGCCTCTACAGGAACACTGCAGCCGTCACAGATAACATGATCTGCGCCGGCCTGCTGGAGGGAGGCAGAGACTCCTGTCAGCGAGACTCTGGAGGTCCGATGGTGAGCAGGCAGGGCTCGGTGTGGGTTCAGGCCGGTGTGGTGAGTTTCGGCTATGGTTGTGCTCAGCCTGGGTTTCCTGGAGTTTACACCAGAGTGTCCCGCTACCAAACCTGGATCAGCTCTCTGATCACCAGCGACCCTCCAGGATTCATCCAGTTCCAGACCAGTGGAGTCGACCCTGACAGATCATACACCTGCAGCACCAGCGCCCCACCGAGGTCCAGCTCCGTCTCCCAGCAGCACGGGTGTGGAGAGGCCCCTGGAGGAGGAGGGGTGTGGCCCTGGATGGTCAGCCTGCAGTGGAACGGGTTACACATGTGCACCGCCTCGCTGCTGAGCGCTGATTTCATCATGACCACCGCATCCTGCCTTTCAGATTTTTCCCAGAATGCCAGTGGCTGGAGAGCGTCTTTAGGCTATCAGTCTAACAGAAACAGCTCAGATCCTTTCCTGCTCTCTGTGGCTGTGATAAATATCACCCTCAGTAACCTGAACCACGGGCTGAACATCTCCGTGCTGCAGCTGGAGGAGCCGGTGGAGTTCAGTGATCTCGTCCAGCCTGTGTGTTTGGACCTGGATAACCGGAGGAGCTTTCCCCCCGGGTTAACCTGCTTATTCACCGgctataaaaataacaattctAGTTTAGTGCTGGAGGAGCAGCAGGTGACAGTAATGGACTGTGGTAGAAacctctcctcatctgagtccATCTGCACTGGATCTCTGTCTCCTAAACAGgatGGTGTAGGAGGGGTGTTAGCGTGTGTATCAGGTGTGTCCTGGTTTCAGGTGGGTGTGATTATGTTGGATTATGGAGATTCAGGACTGCAGGTTTTCTCCAGGGTCTCTCAGTTTGGGAATTTCCTCCAGAGAACTGTCCCTGATCTTCCTCAGCCGCCCACCGTCGCCCCCTTACCCTCCAACCACGAGACCCCCCCATCAGCGGGGGCTCCGCTAGCTCCCATATCCTGTTACAGAAATGCTATTGTCTTTACTGTCttagtattgttattattatcataaaaaCTGTGACATGGGCGAAACTGTGAACCCTGATCTCACCAACCGAGTTTTTATATCATCTGTAACATTATTAACTATGATACTGTTATATAAGTCTGTGTTCAGATAAAGTAAATCTGATGATCTGTGTTAGTTGTTGCAGAATAGGGTTATTACTATGTTACCCATGCCTATGTTACTAAGCTTGGATAAATGAGTTGTACACAAAATGCATAGCTACTCCAGGCATCACATCCTGCAAAAACTCTTTTTAGAAAGGTAGCATTAAGAATACTAACCAAACAAAGTTATTCTTCAAAAATAGcctttaaaaactcatttaaacatacaaatgcatgcaaagtgaatttaagagcaaTAAAActtactacaataaaataaaatatcaaaactgcacaaaataaggCCACGCAATTATATATTTCACTTAtctgcatatctctgcattcagaatacattagtaagaaactctctctgtctcaattTTCCAATATAAGAGACGAGTACAAATTCAGATGAGccctaattatttttaatacatttttttaaatatatt

Function

GO:

id name namespace
GO:0051179 localization biological_process
GO:0051234 establishment of localization biological_process
GO:0006810 transport biological_process
GO:0006811 ion transport biological_process
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669247.1 True 3224 mRNA 0.50 13 18100566 18117852
XM_022669248.1 False 3222 mRNA 0.50 13 18100566 18117853

Neighbor

gene id symbol gene type direction distance location
aldoa aldoa,aldoab,LOC101465268,LOC107720037 coding downstream 43837 18043042 ~ 18056729 (-)
LOC103046263 NA coding downstream 85472 17992067 ~ 18015094 (-)
LOC103023915 NA coding downstream 114077 17972588 ~ 17986489 (-)
ppp4c ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 coding downstream 129546 17961930 ~ 17971020 (-)
LOC103023166 LOC108425993 coding downstream 140275 17941850 ~ 17960291 (-)
LOC103029702 LOC108441164,LOC108413442 coding upstream 5168 18123021 ~ 18126382 (-)
LOC111192381 NA coding upstream 24964 18142817 ~ 18160060 (-)
LOC111192382 NA coding upstream 103018 18220871 ~ 18232563 (-)
LOC111192383 NA coding upstream 117285 18235138 ~ 18241122 (-)
LOC103031189 NA coding upstream 125066 18242919 ~ 18253834 (-)
G37333 LOC103045739 non-coding downstream 391961 17705734 ~ 17708605 (-)
G37309 NA non-coding downstream 544644 17553572 ~ 17555922 (-)
G37298 tmem101,LOC107720276 non-coding downstream 606151 17488885 ~ 17494415 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding downstream 710145 17385841 ~ 17390421 (-)
G37254 tnrc6b,LOC107690060 non-coding downstream 763244 17335591 ~ 17337322 (-)
G37443 NA non-coding upstream 8681 18126534 ~ 18126807 (-)
G37444 NA non-coding upstream 9401 18127254 ~ 18127560 (-)
G37449 NA non-coding upstream 20096 18137949 ~ 18139122 (-)
G37450 NA non-coding upstream 22939 18140792 ~ 18141076 (-)
G37451 NA non-coding upstream 24154 18142007 ~ 18142377 (-)
vps25 vps25 other downstream 304578 17789951 ~ 17795988 (-)
cntd1 NA other downstream 395543 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 411182 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 623688 17473910 ~ 17476878 (-)
G37290 NA other downstream 634542 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 164637 18282490 ~ 18317957 (-)
G37603 NA other upstream 454838 18572691 ~ 18573176 (-)
G37616 NA other upstream 515725 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1426372 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1700415 19818268 ~ 19825652 (-)

Expression


Co-expression Network