LOC111192383


Basic Information

Item Value
gene id LOC111192383
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18235138 ~ 18241122 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669252.1
ATTTCCCTCACCTACAGACCAGAGAACATCCTGCTGAAAGatgaaAGCTCAGCTAATCACACTTCTTGCAGTCTGTCTGCTTCCCACTGTTGTGAGTAACGGCTCTGCAGCTGGTTGGTGCTATCACCTGCCAACCTGCAattacaCCACATGGGCTGCTTTAGTGCCTGAACACTGCAGCGGCGCCCGTCAGTCTCCTGTTAATATCATCACCGCTGATGTTCAGGCAGATCCCAGCCTGACTGCCTTCACCTTCACTGGGTTTGGTGACAGTTCCTCAGTCCTGCAGATAGTGAACGCTCGCGGCAAGACAGtgAAAGTTCTCCTGGATGACAGGAAGATGAGTGTTTCTGGAGGGGGTCTTCCAGGCCTCTACAGGACCCAACAGTTCCACCTCCACTGGGGCAACGGCAGCTCTAAACCTGGATCAGAGCACACTGTGAATGGAAAACAATATCCCatggagCTGCACATTGTAAATGTCAGATCCATTTACCCGAATGCTAGGACTGCTCTCAAGCACTCAATGGGTCTGGCAGTTCTTGCTTTCTTCATCGaagcaACCAATGATCGTGGCAAGCCGGCAAGCTGGAATAATCTGACCTCCTACTTGTCACGTATTCCTGACAAAGGTGATGTGTTGGACATCATGCACGAACTCACTATGGACAGTCTTCTTCAAGGGGTGGACAGGACTAAATATTACCGTTACTCGGGCTCCCTGACCACGCCCCCCTGTAATGAGACTGTGGTGTGGACCGTCTTCAAAGAGCCAATCAAAATCAGCCAAGACTTGATCAGCCTCTTCAGCACGACCACATACGTCAATACGAAAGACGATCCTCTGAACACCAACAACTTCAGAGGAGTTCAGCCTCTCAATGGCAGAGTGATAACATCGCAGATTTATTAATCAGCAGCTATAATTTATCAATACCTGTCCATCACCACGAATACCACACTGCTGCAGTCTGTACCCTGCTGGTCGCTGTATGCATTGGTTGGACTGAATCCTGCTTCTCTGCTACAAttaaaagaatattaaaaaaacaaaatttgctttttttctttctacatTGGTTTAGAAAAATGTACTGAATATATA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01674 cah; carbonic anhydrase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669252.1 True 1105 mRNA 0.47 10 18235138 18241122

Neighbor

gene id symbol gene type direction distance location
LOC111192382 NA coding downstream 2575 18220871 ~ 18232563 (-)
LOC111192381 NA coding downstream 75078 18142817 ~ 18160060 (-)
LOC103029702 LOC108441164,LOC108413442 coding downstream 108756 18123021 ~ 18126382 (-)
LOC103046869 NA coding downstream 117285 18100566 ~ 18117853 (-)
aldoa aldoa,aldoab,LOC101465268,LOC107720037 coding downstream 178409 18043042 ~ 18056729 (-)
LOC103031189 NA coding upstream 1797 18242919 ~ 18253834 (-)
LOC103031500 LOC108441168 coding upstream 29260 18270382 ~ 18278701 (-)
LOC103032028 NA coding upstream 107375 18348497 ~ 18358860 (-)
LOC103033182 LOC108441158,LOC108273897,LOC107664611,LOC107708947 coding upstream 119450 18360572 ~ 18384405 (-)
LOC103033508 si:ch211-255p10.4,brsk1,LOC108441159,LOC107598587,LOC108247084,LOC103033508,LOC107557374,LOC108274928,LOC107654020,LOC107658484 coding upstream 147556 18388678 ~ 18409918 (-)
G37459 NA non-coding downstream 45694 18188473 ~ 18189444 (-)
G37458 NA non-coding downstream 47130 18187049 ~ 18188008 (-)
G37457 NA non-coding downstream 48227 18186368 ~ 18186911 (-)
G37456 NA non-coding downstream 48848 18185594 ~ 18186290 (-)
G37455 NA non-coding downstream 63784 18171142 ~ 18171354 (-)
G37565 NA non-coding upstream 169399 18410521 ~ 18449197 (-)
LOC103033820 NA non-coding upstream 170225 18411347 ~ 18418294 (-)
LOC103035005 NA non-coding upstream 291494 18532616 ~ 18534771 (-)
G37596 LOC108435052 non-coding upstream 306503 18547625 ~ 18547908 (-)
G37597 scn4a non-coding upstream 306961 18548083 ~ 18550231 (-)
vps25 vps25 other downstream 439150 17789951 ~ 17795988 (-)
cntd1 NA other downstream 530115 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 545754 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 758260 17473910 ~ 17476878 (-)
G37290 NA other downstream 769114 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 41368 18282490 ~ 18317957 (-)
G37603 NA other upstream 331569 18572691 ~ 18573176 (-)
G37616 NA other upstream 392456 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1303103 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1577146 19818268 ~ 19825652 (-)

Expression


Co-expression Network