LOC103023686


Basic Information

Item Value
gene id LOC103023686
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18898912 ~ 18914556 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669288.1
TCTGCGGTCGCTTAGATACTGCAGTCCCGCAGAGCCGCGCTGGAGTTCAGCGCTGAACCCGAGTACTCCTCACTGATACCCGGGTCTAGAGAGCGCAGACAGCGCCCCGACATGCAGACAGACACCATAGAGCGCAGACAGCGGGCTGAGGACACGCAGACAGACTCGACAGAGCGCAGACCGCAGTTCAGCTGCAGGACAGAGCGCAGACAGAGCGCCTGCGGCCGCTGCCAGTCCTGCGCCTACTCTACCCACCTCCAGCACTCAACCCAGTGGCTGAACCGAGCCGGAGACGAGGCTAAACGACGCTTCCTCACCGGCCTTTTACTGCGATGCAGGAGCCTGAAGATCCTGGAGAACCTCCAGAATGTTCTCCAGATAACCTCAGGGAAGGACTTCACTTATTCCAGAGCTCAGATTAAAGCGCAGCTCCCAGTGGAGGGGAGGAACTGGGAGTGTGGAGACAGTGGGAATCTGTGTGGGATGAGCATGATGGAAACCTGGGACTGGTTCATCAGGAGCCCAGACTGGATAAAGTGCAGTTATTTACTGCGGCTCTTCTCGCTGTGCCACTTTGAGCTTCTGCACAGGCTGGGGAACCTGGTCGGGGTCCTCATAGCTCGAGAGAAACGAGGTTTTCTGCACTTTAACACAGcagaGAATGATGAAGACCAGGGCTCTGTATCAGGATCAATCTACTCCTTCCACACTGATGATCATCCAGAGCTGGATCTTCTGGTCCAGGCGAGCTCGGTCTATGAGCCTGTCAGTTTCCCTCATCAAACCCAACATAACAGTGCCGTGGAGATTCTGGACAAACCACAACCCACAAAGAATTCTATCTGGAGTAAGCAAGAGGAGATAACCTACATAGCTCAAAAAAGACAAGATAGTGACACAGACTCAAACAGCTCAGAGGATCCCGCTCTCATGGTCGTCCCCGGGTCTTCCAAATCCATGTCGGGGGTCAGCCTCCACCGAGACTTCATTGGAGGACTTCCAGTCGATATCAGCAAGAGGATTTTAGGTCTGCTGGACAAGGCCACCCTTCAACACTGTAAACGTGTGTCCCAGCACTGGTGCTATCTAACAGAGGAGGTGCTAGGAGAGATGGAGGTGAAGAAGATGGTGGAAAAAGAGGCAATGAATTTGCAGGGCAGCTCTACCTCTGGAGTTAACCCTGTCTACGCCAGGATCCGAAAGGTCTTAGTGCCCCTCGGGGAAGAAGAGGACGACACTCATCCTATAAAGACTGGCCCCAGTAGTATAAAGGAAGTTGGGTGTTTGGAATCAGTCTATACAGGGGTTAAAACCAAGGCGGTGGAACTGGAGGAGAGGAATGTGTTCTGTGGAGACTTCAACATCCTGATTCTGCTGGACAGAGAGGACCCCAGCAGAGTGATCCATTACAGCGGGGGCCAGATGGTGGCGGTGGGCTCGAAGGACCGTGCTGTGCGTCTGCTGGACGTCACTCAGATTAAAGAAGTGCCGCTATTGATGCAGGGCCACGCTGGCAGCGTCCGAGCTGTGCTGATCTGTGAAGAGAGGGGTTTAATCATCAGTGCAAGCTACGACCTCAGCATCAGGTGCTGGAACCTAAAGACAGGAGAGTGTACCATGCTGCTATCTGGACACATGGGAACCATCACCTGTTTGGACCTCCATGAAGATCTTCTGGTGTCTGGGGCCAGAGACTGCAGAGTTAAAGTGTGGAGCCTCCAGTCCGGGCAGTGCTATGagaagctgaagatgggtcacCGTAAgcctgtgctgtgtgtgaagATCAGCGCTTCTCTGGTGCTCAGCAGTTGTGAGGAGGGCCTGGTGAAAGTGTGGGAGACGGAGACGGCAGATCTGCTAAAGATTATAACTGGTCATCAGGGTTATGTGAAGTGTCTGTTCTTCGATCAGTGGCACATTCTGTCTGGAGGGGCAGATGGGCAGGTTCTGGCCTGGAGCACCAAAACCCACTTTACAAACAGCCTCATGACCTTCCACCACCCAAAGGAAGTGCTCACCCTGTCCTTCCTCTTCCTGCGGGTCATCACCGGCTGTTTGGACGGAAAGATCCGGATCTTTAACTTCCTCAGTGGAGACTGTCTTAGAATCATCAAAATCAGCACCCACCAGAGTCCAGTActctccatacacacacatgacAACAGGATTGTGGTGAACAGCAGTAGTCGTGTGTTGCTGCTGCAGTTCACTGAGCAGCGCTGGGATTACTCTGCTGGACCTAAGAGAAGATCCTGGGCTGCTCTGCATCCTCCTCCTCACAGCAATCTTCATCCTGAACCAAAGTCTTCCTCAGGTTCCTCCAGACCAAAGATCTACAACAGAGACAGAAGAACCGGAACACAGGGTTTTCCTCAGAACACCAGGAGCCAGTCAGCCCCCTGCAGGCAGAAAGCACACAATATTCAGGAGCAGATCATACGCCCGGCCACTCTGTCTCCCAACAACCGAGCCAGAAtcacctccagcagcacagcCACCAGCTCAGaaaagtCCTTGGCGACCTCCAAACATGTCAATGAGACAGCTGTCCAAGAGTATCTGAGGAAGAGAGGCCTCCATCATCCAGTCACCACCACCCAGGTGCTGTTAAAGGTGGTGCGCTCCACCCAGGAGCCCCACAACTGTGACCTGGCCACCTCCAACATGAATCTGAATGCAGCAGTGCGAGATTGCTGGGGTCCACCTGCCTCTGATCCGGTCATGGAGATCCAGACCAAaactccacctcctccacctcctcctctaCCACCTGCCAAAACTCACCACCGGCCACATTCAGCTCCCAAGCCGTCCAATCAGACTTCCTTCAAAGGTACGGTGAAAATCTACACCACTCTCAGAACTCACCCGCTGGATCTAAAGCTTCGACATTCCCTTCACTCCAGAGAAGTTCAATCAAATATTCCCTCTCCGACTTTAATCCGACCCCAGACAGTTCATGAGCCCAAGctcaaacccaaacccaaacccaagCGTCCTCAGACGGTCTGTGGGACACGTACGGTCAGTTCCTTCACCACCACCGCAGAAGAAGACGTCCAGAACATTCATAAGGTGTTCATGAGGAGCGCAGTCAAGCATCCAGGCCGCCACGTCGATTTTGAGATGCCTGGAAATCCCAGAAAATCACACATTCCTCTGGATCCattcagaaaacacacaaacttcCAGCTAAAGACTgattcagagctgcaggagctcCTACAGTCCCAATGCACTGAACTACATCACActcaaaaccacacacacactcaaaaccaCAAGGAGAAGCAGCGCAGAACAGCCTGGAAACTGAAGATCAAAGGTCTGCCACCTAACGACTACATGAAGCAGGGTCAGGTGTATGCTCCAGAGCTGGGGGAGGACATCTACATCtgatatatacaggggttggacaatgaaactgaaacacctggttttagaccacaataattgattgtggtgacggacagttctggtggaaacaggagagttgaggtgtacaTTGAATTTTTCAACTTTCAGagagcttcctcttacagcgtcca
>XM_022669289.1
TCTGCGGTCGCTTAGATACTGCAGTCCCGCAGAGCCGCGCTGGAGTTCAGCGCTGAACCCGAGTACTCCTCACTGATACCCGGGTCTAGAGAGCGCAGACAGCGCCCCGACATGCAGACAGACACCATAGAGCGCAGACAGCGGGCTGAGGACACGCAGACAGACTCGACAGAGCGCAGACCGCAGTTCAGCTGCAGGACAGAGCGCAGACAGAGCGCCTGCGGCCGCTGCCAGTCCTGCGCCTACTCTACCCACCTCCAGCACTCAACCCAGTGGCTGAACCGAGCCGGAGACGAGGCTAAACGACGCTTCCTCACCGGCCTTTTACTGCGATGCAGGAGCCTGAAGATCCTGGAGAACCTCCAGAATGTTCTCCAGATAACCTCAGGGAAGGACTTCACTTATTCCAGAGCTCAGATTAAAGCGCAGCTCCCAGTGGAGGGGAGGAACTGGGAGTGTGGAGACAGTGGGAATCTGTGTGGGATGAGCATGATGGAAACCTGGGACTGGTTCATCAGGAGCCCAGACTGGATAAAGTGCAGTTATTTACTGCGGCTCTTCTCGCTGTGCCACTTTGAGCTTCTGCACAGGCTGGGGAACCTGGTCGGGGTCCTCATAGCTCGAGAGAAACGAGGTTTTCTGCACTTTAACACAGaGAATGATGAAGACCAGGGCTCTGTATCAGGATCAATCTACTCCTTCCACACTGATGATCATCCAGAGCTGGATCTTCTGGTCCAGGCGAGCTCGGTCTATGAGCCTGTCAGTTTCCCTCATCAAACCCAACATAACAGTGCCGTGGAGATTCTGGACAAACCACAACCCACAAAGAATTCTATCTGGAGTAAGCAAGAGGAGATAACCTACATAGCTCAAAAAAGACAAGATAGTGACACAGACTCAAACAGCTCAGAGGATCCCGCTCTCATGGTCGTCCCCGGGTCTTCCAAATCCATGTCGGGGGTCAGCCTCCACCGAGACTTCATTGGAGGACTTCCAGTCGATATCAGCAAGAGGATTTTAGGTCTGCTGGACAAGGCCACCCTTCAACACTGTAAACGTGTGTCCCAGCACTGGTGCTATCTAACAGAGGAGGTGCTAGGAGAGATGGAGGTGAAGAAGATGGTGGAAAAAGAGGCAATGAATTTGCAGGGCAGCTCTACCTCTGGAGTTAACCCTGTCTACGCCAGGATCCGAAAGGTCTTAGTGCCCCTCGGGGAAGAAGAGGACGACACTCATCCTATAAAGACTGGCCCCAGTAGTATAAAGGAAGTTGGGTGTTTGGAATCAGTCTATACAGGGGTTAAAACCAAGGCGGTGGAACTGGAGGAGAGGAATGTGTTCTGTGGAGACTTCAACATCCTGATTCTGCTGGACAGAGAGGACCCCAGCAGAGTGATCCATTACAGCGGGGGCCAGATGGTGGCGGTGGGCTCGAAGGACCGTGCTGTGCGTCTGCTGGACGTCACTCAGATTAAAGAAGTGCCGCTATTGATGCAGGGCCACGCTGGCAGCGTCCGAGCTGTGCTGATCTGTGAAGAGAGGGGTTTAATCATCAGTGCAAGCTACGACCTCAGCATCAGGTGCTGGAACCTAAAGACAGGAGAGTGTACCATGCTGCTATCTGGACACATGGGAACCATCACCTGTTTGGACCTCCATGAAGATCTTCTGGTGTCTGGGGCCAGAGACTGCAGAGTTAAAGTGTGGAGCCTCCAGTCCGGGCAGTGCTATGagaagctgaagatgggtcacCGTAAgcctgtgctgtgtgtgaagATCAGCGCTTCTCTGGTGCTCAGCAGTTGTGAGGAGGGCCTGGTGAAAGTGTGGGAGACGGAGACGGCAGATCTGCTAAAGATTATAACTGGTCATCAGGGTTATGTGAAGTGTCTGTTCTTCGATCAGTGGCACATTCTGTCTGGAGGGGCAGATGGGCAGGTTCTGGCCTGGAGCACCAAAACCCACTTTACAAACAGCCTCATGACCTTCCACCACCCAAAGGAAGTGCTCACCCTGTCCTTCCTCTTCCTGCGGGTCATCACCGGCTGTTTGGACGGAAAGATCCGGATCTTTAACTTCCTCAGTGGAGACTGTCTTAGAATCATCAAAATCAGCACCCACCAGAGTCCAGTActctccatacacacacatgacAACAGGATTGTGGTGAACAGCAGTAGTCGTGTGTTGCTGCTGCAGTTCACTGAGCAGCGCTGGGATTACTCTGCTGGACCTAAGAGAAGATCCTGGGCTGCTCTGCATCCTCCTCCTCACAGCAATCTTCATCCTGAACCAAAGTCTTCCTCAGGTTCCTCCAGACCAAAGATCTACAACAGAGACAGAAGAACCGGAACACAGGGTTTTCCTCAGAACACCAGGAGCCAGTCAGCCCCCTGCAGGCAGAAAGCACACAATATTCAGGAGCAGATCATACGCCCGGCCACTCTGTCTCCCAACAACCGAGCCAGAAtcacctccagcagcacagcCACCAGCTCAGaaaagtCCTTGGCGACCTCCAAACATGTCAATGAGACAGCTGTCCAAGAGTATCTGAGGAAGAGAGGCCTCCATCATCCAGTCACCACCACCCAGGTGCTGTTAAAGGTGGTGCGCTCCACCCAGGAGCCCCACAACTGTGACCTGGCCACCTCCAACATGAATCTGAATGCAGCAGTGCGAGATTGCTGGGGTCCACCTGCCTCTGATCCGGTCATGGAGATCCAGACCAAaactccacctcctccacctcctcctctaCCACCTGCCAAAACTCACCACCGGCCACATTCAGCTCCCAAGCCGTCCAATCAGACTTCCTTCAAAGGTACGGTGAAAATCTACACCACTCTCAGAACTCACCCGCTGGATCTAAAGCTTCGACATTCCCTTCACTCCAGAGAAGTTCAATCAAATATTCCCTCTCCGACTTTAATCCGACCCCAGACAGTTCATGAGCCCAAGctcaaacccaaacccaaacccaagCGTCCTCAGACGGTCTGTGGGACACGTACGGTCAGTTCCTTCACCACCACCGCAGAAGAAGACGTCCAGAACATTCATAAGGTGTTCATGAGGAGCGCAGTCAAGCATCCAGGCCGCCACGTCGATTTTGAGATGCCTGGAAATCCCAGAAAATCACACATTCCTCTGGATCCattcagaaaacacacaaacttcCAGCTAAAGACTgattcagagctgcaggagctcCTACAGTCCCAATGCACTGAACTACATCACActcaaaaccacacacacactcaaaaccaCAAGGAGAAGCAGCGCAGAACAGCCTGGAAACTGAAGATCAAAGGTCTGCCACCTAACGACTACATGAAGCAGGGTCAGGTGTATGCTCCAGAGCTGGGGGAGGACATCTACATCtgatatatacaggggttggacaatgaaactgaaacacctggttttagaccacaataattgattgtggtgacggacagttctggtggaaacaggagagttgaggtgtacaTTGAATTTTTCAACTTTCAGagagcttcctcttacagcgtcca

Function

GO: NA

KEGG:

id description
K10266 FBXW10; F-box and WD-40 domain protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669288.1 True 3548 mRNA 0.53 14 18898912 18914556
XM_022669289.1 False 3545 mRNA 0.53 14 18898912 18914556

Neighbor

gene id symbol gene type direction distance location
trnag-ccc NA coding upstream 1540 18897302 ~ 18897372 (+)
LOC103036574 NA coding upstream 3061 18883895 ~ 18895851 (+)
klhl11 klhl11,LOC107551837,LOC107694394,LOC107556757,LOC107674689 coding upstream 20100 18869146 ~ 18878812 (+)
LOC103023371 LOC108431393,LOC103369716 coding upstream 33236 18829967 ~ 18865676 (+)
LOC103035736 dnajc7,LOC103035736,LOC105007721,LOC108431365,LOC100706534,LOC101467049,LOC102783216,LOC105919562,LOC106589259,LOC106607285 coding upstream 71195 18814772 ~ 18827717 (+)
LOC103042924 NA coding downstream 246988 19161544 ~ 19169082 (+)
LOC103037098 LOC108425932 coding downstream 256186 19170742 ~ 19182247 (+)
LOC103043248 col1a1b,LOC108444293,LOC108273947,LOC107708989 coding downstream 334592 19249148 ~ 19277687 (+)
rfng rfng,LOC106610281 coding downstream 379048 19293604 ~ 19311143 (+)
dcxr dcxr coding downstream 403156 19317712 ~ 19328823 (+)
G37652 NA non-coding upstream 85961 18812739 ~ 18812951 (+)
G37592 NA non-coding upstream 257817 18589222 ~ 18641095 (+)
G37557 NA non-coding upstream 426339 18470159 ~ 18472573 (+)
G37534 NA non-coding upstream 512260 18386414 ~ 18386652 (+)
G37501 LOC108441156 non-coding upstream 580960 18313306 ~ 18317952 (+)
LOC111192409 NA non-coding downstream 48681 18963237 ~ 18964036 (+)
G37735 NA non-coding downstream 300012 19214568 ~ 19214818 (+)
G37751 NA non-coding downstream 427543 19342099 ~ 19342794 (+)
G37767 NA non-coding downstream 560066 19474622 ~ 19476578 (+)
G37862 NA non-coding downstream 742949 19657505 ~ 19658477 (+)
LOC103022762 NA other upstream 191184 18645635 ~ 18707728 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other upstream 522567 18371378 ~ 18376345 (+)
G37404 NA other upstream 784986 18107564 ~ 18113926 (+)
LOC103046566 NA other upstream 798933 18063983 ~ 18099979 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other upstream 927913 17961940 ~ 17970999 (+)
G37749 NA other downstream 414812 19329368 ~ 19331661 (+)
G37812 mms19,LOC106578995 other downstream 566500 19481056 ~ 19484915 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other downstream 574343 19488899 ~ 19511441 (+)
G37943 NA other downstream 1241172 20155728 ~ 20158339 (+)
G38079 kif22,LOC107664627 other downstream 2104613 21019169 ~ 21030797 (+)

Expression


Co-expression Network