G51529


Basic Information

Item Value
gene id G51529
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3062033 ~ 3062587 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58708
ATAACCAGCTTGCGGCCATTTCGCTCCTGATTTTCGGCGAGCGTGTGATGCACTCGCACACACACGCGCGCATCGCGGGGGTGTTCGCTGAATCGCTGAGTACCGAATTGAAATGCACTCAGTGGATTAGTGCTATTTGAGAGAGGAGTGCCTCTCCGAGGGGCTGAATGTGCCGCAGGAAAACTGACCTGCGCCCATCACGATTAAAGCCGCCCAGTTTGTTATGCAACAGCTCTACAAGTGCAGTCAGACAACTCCTACAGCTGTTTCATGCAGGAGTCACGACTCAAATGTGTAGGCTCTCCATTACCTTTTGTCCGCTACCGGCGCTGATTTTTCACAGACTGCCGCTGCGACCCATTGTAGCCCTCCTCCACCCCCACACACTGGATTGTGAGCCCCCGTTTTGGAGTGTTTCAAATGGAGATGGAGGTGGTGGGGTGACCCCTCGACAGAGTGTGGGAAGCCCGTTTGGGCACCGAAGGGCTGATTAAGCCTTCCATATCCCCTGTTGTGCTCCACTGTGATGTAACACCTTCTCCTAGACGAATGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58708 True 555 TUCP 0.47 1 3062033 3062587

Neighbor

gene id symbol gene type direction distance location
CI01000009_02918681_02973307 KDM6A coding upstream 88081 2918681 ~ 2973952 (+)
CI01000009_02799246_02827589 NA coding upstream 234393 2799031 ~ 2827640 (+)
CI01000009_02713403_02713914 NA coding upstream 348035 2712958 ~ 2713998 (+)
CI01000009_02674026_02678655 NA coding upstream 383287 2673802 ~ 2678746 (+)
CI01000009_02667840_02668883 NA coding upstream 392869 2667442 ~ 2669164 (+)
CI01000009_03123137_03137452 CCDC80 coding downstream 59529 3122116 ~ 3138311 (+)
CI01000009_03145417_03159851 F5 coding downstream 82830 3145417 ~ 3159914 (+)
CI01000009_03164135_03169470 GPR161 coding downstream 99731 3162318 ~ 3170140 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S coding downstream 139620 3202207 ~ 3208984 (+)
CI01000009_03211734_03220047 NXPE3 coding downstream 149147 3211734 ~ 3222297 (+)
G51527 NA non-coding upstream 7021 3054332 ~ 3055012 (+)
G51525 NA non-coding upstream 10669 3050909 ~ 3051364 (+)
G51523 NA non-coding upstream 11925 3049792 ~ 3050108 (+)
G51522 NA non-coding upstream 14934 3046149 ~ 3047099 (+)
G51514 NA non-coding upstream 60125 3001610 ~ 3001908 (+)
G51531 NA non-coding downstream 1613 3064200 ~ 3064432 (+)
G51537 NA non-coding downstream 13555 3076142 ~ 3076380 (+)
G51539 NA non-coding downstream 19342 3081929 ~ 3082410 (+)
G51553 NA non-coding downstream 45139 3107726 ~ 3108011 (+)
G51552 NA non-coding downstream 45876 3108463 ~ 3108912 (+)
G51274 NA other upstream 711547 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 1160607 1897343 ~ 1919516 (+)
G51122 NA other upstream 1380067 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 1623678 1429873 ~ 1435328 (+)
G50920 NA other upstream 2291800 769841 ~ 770233 (+)
G53388 NA other downstream 2459655 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 2797715 5931718 ~ 5943899 (+)
G53651 NA other downstream 3182977 6245564 ~ 6248392 (+)
G56100 NA other downstream 6066713 9129300 ~ 9130286 (+)

Expression


Co-expression Network