LOC103022410


Basic Information

Item Value
gene id LOC103022410
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 25359459 ~ 25364883 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669451.1
GGTATAAATACGGGCCCGGCCTGCAGCATGCTGAGAGATGGAGGGGAAGGACAGTAGTGAGGAGGCGGTGGCCGCCATAGAGGCCTGCTACCAAGGCTTCAACCCTGCGGCGTACCTGCAGTACAACTACACTCCTCCACGAGCCGACTTCCAGCGGAGCGACAGCATCGTGCCGTGGAAACTCAGCTGCCTTCACAAAGCTTTCTCCGAGGGTGAGATGCCTCTCATTATAGCTCTCAGATTCAAGAGAACATCCAACAAAGCACCCGGCCACCGACCCGCCACCACCAAGCACCAGCCACCACGAAATGGGGAAAGTGGGGTGATTTGTGCCAGTGGGCAAGTTGTGCCACCCCCTGTTTCTAGGGAACCACTGAACCCTACAGCCTGGACAGAGAAAGCGGAGAGGCTTCGCTCGGTGGTGACCGATGTGCTGCCCATCAATGTTCACCAGCCCTGCCCCCTGCCGGCTGGATCTATACCCAGCTCAGGAGCTGACTGCCTGGTGTCCTCCTTCTGCCTGGAGAGTGTGAGCCCGGACCTGCCCTCCTTCACACGGGCACTGGGCCATCTGTCCGGCCTCCTGCGGTCCGGCGGTCACCTGCTGCTGATCGGAGCGCTGGGCGAGAGCTTCTATCTCGGGGCTCCTGGCCTGCAGATCCCGGTGGTGCCGCTGGATGAGGCTCAGGTTTGTTCCAGCCTGAGAACCAGCGGCTAccagctgctgcagctcagtgtCTACCACCTACCACCAGATATGAGGGTCGGGGTGGACGATGTCTCCGGAGTGTTCTTCGCCAAGGCCAGGAAACCGTAGTCGTGGCAACTGGATGTAAAGGATGTGAAGGTTAAGTGGTGGGTGGAATGAAGGAGGAATGTTTCCATATTTTTATTGCCTTTGATACGACAGCTATTTCTGATCATGCAGTCTAAAGGTGGAAAGTGATCCTACAATGCCGAGCACAGTGGCACACTCAAACAACTATGAAGTGATactccaaaaaatatatatagaaatttaaattagttttaagaGTCCTTTCCTGACTTTGAAAGCTGCTTTAcactatattttttgttaaatatgtaCTTCTTCACACAGATTCTTCATTGCTGTCTGCTTTGTTAAATCAATATATACAGTGCATCCGGCAAGTATTCTCAGCGCTTCACTTATTCCACATTTTGTTATGTTACAGCTTTAttccaaattgtattaaattaattttagtaattttacataaaataccccattatgaccatgtgaaa

Function

GO: NA

KEGG:

id description
K00553 PNMT; phenylethanolamine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669451.1 True 1269 mRNA 0.51 3 25359459 25364883

Neighbor

gene id symbol gene type direction distance location
LOC103022724 NA coding upstream 25530 25294253 ~ 25333929 (+)
LOC103032189 rpl19,LOC103032189,LOC107084780,LOC107567432,LOC102219718,LOC107670912,LOC107378566,LOC107754295 coding upstream 333565 25022191 ~ 25025894 (+)
LOC103031867 NA coding upstream 338802 25016336 ~ 25020657 (+)
pkmyt1 pkmyt1 coding upstream 351432 24995486 ~ 25008027 (+)
pelo pelo,LOC107653258 coding upstream 493505 24848136 ~ 24865954 (+)
LOC111192426 NA coding downstream 56442 25421325 ~ 25433217 (+)
LOC103024180 tlk2,LOC108431425 coding downstream 71572 25436455 ~ 25461136 (+)
brca1 NA coding downstream 113653 25478536 ~ 25534478 (+)
G39123 NA non-coding upstream 141153 25218047 ~ 25218306 (+)
G39119 NA non-coding upstream 150463 25208497 ~ 25208996 (+)
G38945 patl2,tceb2,elob,LOC100708306,LOC102795145 non-coding upstream 366481 24945980 ~ 24992978 (+)
G39177 NA non-coding downstream 3896 25368779 ~ 25369315 (+)
G39185 NA non-coding downstream 48768 25413651 ~ 25413994 (+)
G39191 NA non-coding downstream 97883 25462766 ~ 25465369 (+)
G39204 NA non-coding downstream 176902 25541785 ~ 25545529 (+)
G39205 NA non-coding downstream 181231 25546114 ~ 25546488 (+)
G38870 NA other upstream 742007 24616784 ~ 24617452 (+)
G38817 NA other upstream 1384939 23974161 ~ 23974520 (+)
trnar-ccu_27 NA other upstream 1609266 23750121 ~ 23750193 (+)
trnar-ccu_26 NA other upstream 1609368 23750019 ~ 23750091 (+)
trnar-ccu_25 NA other upstream 1609470 23749917 ~ 23749989 (+)
G39179 NA other downstream 10076 25374959 ~ 25375344 (+)

Expression


Co-expression Network