trnag-ccc


Basic Information

Item Value
gene id trnag-ccc
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18897302 ~ 18897372 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnag-ccc
GCGCCGCTGGTGTAGTGGTATCATGCAAGATTCCCATTCTTGCGacccgggttcgattcccgggcGGCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ccc True 71 tRNA 0.62 1 18897302 18897372

Neighbor

gene id symbol gene type direction distance location
LOC103036574 NA coding upstream 1451 18883895 ~ 18895851 (+)
klhl11 klhl11,LOC107551837,LOC107694394,LOC107556757,LOC107674689 coding upstream 18490 18869146 ~ 18878812 (+)
LOC103023371 LOC108431393,LOC103369716 coding upstream 31626 18829967 ~ 18865676 (+)
LOC103035736 dnajc7,LOC103035736,LOC105007721,LOC108431365,LOC100706534,LOC101467049,LOC102783216,LOC105919562,LOC106589259,LOC106607285 coding upstream 69585 18814772 ~ 18827717 (+)
LOC103023065 LOC108431394,LOC107590592 coding upstream 90320 18725892 ~ 18806982 (+)
LOC103023686 NA coding downstream 1540 18898912 ~ 18914556 (+)
LOC103042924 NA coding downstream 264172 19161544 ~ 19169082 (+)
LOC103037098 LOC108425932 coding downstream 273370 19170742 ~ 19182247 (+)
LOC103043248 col1a1b,LOC108444293,LOC108273947,LOC107708989 coding downstream 351776 19249148 ~ 19277687 (+)
rfng rfng,LOC106610281 coding downstream 396232 19293604 ~ 19311143 (+)
G37652 NA non-coding upstream 84351 18812739 ~ 18812951 (+)
G37592 NA non-coding upstream 256207 18589222 ~ 18641095 (+)
G37557 NA non-coding upstream 424729 18470159 ~ 18472573 (+)
G37534 NA non-coding upstream 510650 18386414 ~ 18386652 (+)
G37501 LOC108441156 non-coding upstream 579350 18313306 ~ 18317952 (+)
LOC111192409 NA non-coding downstream 65865 18963237 ~ 18964036 (+)
G37735 NA non-coding downstream 317196 19214568 ~ 19214818 (+)
G37751 NA non-coding downstream 444727 19342099 ~ 19342794 (+)
G37767 NA non-coding downstream 577250 19474622 ~ 19476578 (+)
G37862 NA non-coding downstream 760133 19657505 ~ 19658477 (+)
LOC103022762 NA other upstream 189574 18645635 ~ 18707728 (+)
G37531 LOC108441158,LOC108273897,LOC107664611,LOC107708947 other upstream 520957 18371378 ~ 18376345 (+)
G37404 NA other upstream 783376 18107564 ~ 18113926 (+)
LOC103046566 NA other upstream 797323 18063983 ~ 18099979 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other upstream 926303 17961940 ~ 17970999 (+)
G37749 NA other downstream 431996 19329368 ~ 19331661 (+)
G37812 mms19,LOC106578995 other downstream 583684 19481056 ~ 19484915 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other downstream 591527 19488899 ~ 19511441 (+)
G37943 NA other downstream 1258356 20155728 ~ 20158339 (+)
G38079 kif22,LOC107664627 other downstream 2121797 21019169 ~ 21030797 (+)

Expression


Co-expression Network