trnam-cau_19


Basic Information

Item Value
gene id trnam-cau_19
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 13197702 ~ 13197775 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnam-cau_19
CCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCCTGAAGGTCGTGAGTTCGATCCTCACACGGGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnam-cau_19 True 74 tRNA 0.57 1 13197702 13197775

Neighbor

gene id symbol gene type direction distance location
LOC103038558 NA coding downstream 268734 12926233 ~ 12928968 (-)
LOC103038875 NA coding downstream 283335 12837168 ~ 12914367 (-)
LOC103039695 LOC108429709 coding downstream 494871 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 528915 12668716 ~ 12668787 (-)
trnaq-cug_2 NA coding downstream 529795 12667836 ~ 12667907 (-)
trnam-cau_20 NA coding upstream 2391 13200166 ~ 13200238 (-)
LOC111192419 NA coding upstream 9819 13207594 ~ 13209507 (-)
LOC103042955 LOC108431373,LOC106578596,LOC103365861,LOC106590056 coding upstream 56673 13254448 ~ 13260826 (-)
LOC103042649 NA coding upstream 74100 13271875 ~ 13297430 (-)
avl9 avl9,LOC102783546 coding upstream 114777 13312552 ~ 13336023 (-)
G36114 NA non-coding downstream 186690 13006516 ~ 13011012 (-)
G36125 NA non-coding downstream 191955 13005499 ~ 13005747 (-)
G36124 NA non-coding downstream 195683 13001731 ~ 13002019 (-)
G36123 NA non-coding downstream 202815 12994574 ~ 12994887 (-)
G36122 NA non-coding downstream 206281 12991074 ~ 12991421 (-)
G36223 NA non-coding upstream 248272 13446047 ~ 13450206 (-)
G36236 NA non-coding upstream 303521 13501296 ~ 13504050 (-)
G36253 NA non-coding upstream 361443 13559218 ~ 13573367 (-)
G36257 NA non-coding upstream 390011 13587786 ~ 13609936 (-)
G36283 NA non-coding upstream 481021 13678796 ~ 13758346 (-)
G36074 NA other downstream 486157 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 1125275 12067533 ~ 12072427 (-)
clrn3 NA other downstream 2114520 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3766474 9426075 ~ 9431228 (-)
G35512 NA other downstream 3991791 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 109313 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 277391 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1588177 14785952 ~ 14797212 (-)
G36677 NA other upstream 2549625 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2639330 15837105 ~ 15840516 (-)

Expression


Co-expression Network