trnaq-cug_2


Basic Information

Item Value
gene id trnaq-cug_2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12667836 ~ 12667907 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnaq-cug_2
GGTCCCATGGGGTAATGGTAATCACTCTGGACTCTGAATCCAGCGATCCGAGTTCGAATCTCGGTGGGACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaq-cug_2 True 72 tRNA 0.49 1 12667836 12667907

Neighbor

gene id symbol gene type direction distance location
ppp2r2d ppp2r2d,LOC107553689,LOC105009682 coding downstream 64456 12575511 ~ 12603380 (-)
tcerg1l tcerg1l coding downstream 250566 12243281 ~ 12417270 (-)
ebf3 ebf3,ebf3a,LOC107582179,LOC107745698 coding downstream 629254 11897053 ~ 12038582 (-)
fam196a fam196a coding downstream 1787002 10827410 ~ 10880834 (-)
wbp2 wbp2,LOC107667802,LOC107578800 coding downstream 2173650 10487067 ~ 10494186 (-)
trnaq-uug NA coding upstream 809 12668716 ~ 12668787 (-)
LOC103039695 LOC108429709 coding upstream 30681 12698588 ~ 12702831 (-)
LOC103038875 NA coding upstream 169261 12837168 ~ 12914367 (-)
LOC103038558 NA coding upstream 258326 12926233 ~ 12928968 (-)
trnam-cau_19 NA coding upstream 529795 13197702 ~ 13197775 (-)
G36061 NA non-coding downstream 62480 12604995 ~ 12605356 (-)
G36047 NA non-coding downstream 92385 12574929 ~ 12575451 (-)
G36045 NA non-coding downstream 92994 12573855 ~ 12574842 (-)
G36043 NA non-coding downstream 205982 12459772 ~ 12461854 (-)
G35946 NA non-coding downstream 600449 12050053 ~ 12067387 (-)
G36082 NA non-coding upstream 18119 12686026 ~ 12686397 (-)
G36080 NA non-coding upstream 26919 12694826 ~ 12695659 (-)
G36075 NA non-coding upstream 36445 12704352 ~ 12706177 (-)
G36100 NA non-coding upstream 163435 12831342 ~ 12832622 (-)
G36093 NA non-coding upstream 166727 12834634 ~ 12849471 (-)
LOC103036331 NA other downstream 595409 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1584654 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3236608 9426075 ~ 9431228 (-)
G35512 NA other downstream 3461925 9204570 ~ 9205911 (-)
tbata NA other downstream 3663940 8938933 ~ 9003896 (-)
G36074 NA other upstream 41901 12709808 ~ 12711545 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 639181 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 807259 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 2118045 14785952 ~ 14797212 (-)
G36677 NA other upstream 3079493 15747400 ~ 15774593 (-)

Expression


Co-expression Network